Wall clock time and date at job start Tue Mar 9 2021 12:52:10 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50702 * 1 3 3 C 1.38215 * 119.99534 * 2 1 4 4 C 1.38260 * 119.99681 * 180.02562 * 3 2 1 5 5 C 1.50697 * 119.99754 * 179.97438 * 4 3 2 6 6 H 1.08998 * 112.85657 * 11.19712 * 5 4 3 7 7 C 1.53786 * 113.61584 * 142.50480 * 5 4 3 8 8 C 1.53786 * 87.08123 * 139.97706 * 7 5 4 9 9 H 1.08996 * 113.61495 * 220.01536 * 8 7 5 10 10 N 1.46502 * 113.68901 * 89.12875 * 8 7 5 11 11 C 1.34777 * 120.00252 * 107.46243 * 10 8 7 12 12 O 1.21282 * 119.99512 * 359.97438 * 11 10 8 13 13 C 1.50696 * 120.00287 * 179.97438 * 11 10 8 14 14 O 1.42897 * 109.47135 * 180.02562 * 13 11 10 15 15 C 1.35905 * 117.00031 * 180.02562 * 14 13 11 16 16 C 1.38738 * 120.05229 * 359.72469 * 15 14 13 17 17 C 1.38142 * 119.93974 * 179.69976 * 16 15 14 18 18 C 1.38273 * 120.05669 * 0.60068 * 17 16 15 19 19 C 1.50697 * 119.94233 * 179.70144 * 18 17 16 20 20 O 1.42903 * 109.47053 * 119.97784 * 19 18 17 21 21 Si 1.86300 * 109.47539 * 359.97403 * 19 18 17 22 22 C 1.38262 * 120.10875 * 359.67309 * 18 17 16 23 23 C 1.38144 * 120.05719 * 0.02853 * 22 18 17 24 24 C 1.53781 * 87.08247 * 334.57074 * 8 7 5 25 25 C 1.38211 * 120.00003 * 359.97438 * 4 3 2 26 26 C 1.38258 * 120.00163 * 359.80844 * 25 4 3 27 27 C 1.38211 * 119.99779 * 0.44980 * 26 25 4 28 28 H 1.09002 * 109.46776 * 269.96948 * 1 2 3 29 29 H 1.08993 * 109.47429 * 29.97620 * 1 2 3 30 30 H 1.08998 * 109.46961 * 149.97871 * 1 2 3 31 31 H 1.07996 * 120.00479 * 359.97438 * 3 2 1 32 32 H 1.08996 * 113.61135 * 254.52523 * 7 5 4 33 33 H 1.09003 * 113.61071 * 25.43243 * 7 5 4 34 34 H 0.97006 * 119.99956 * 287.46699 * 10 8 7 35 35 H 1.09000 * 109.46969 * 300.00425 * 13 11 10 36 36 H 1.09001 * 109.47221 * 60.00158 * 13 11 10 37 37 H 1.07998 * 120.02759 * 0.02562 * 16 15 14 38 38 H 1.08004 * 119.97238 * 180.32138 * 17 16 15 39 39 H 1.09003 * 109.46853 * 239.97716 * 19 18 17 40 40 H 0.96698 * 113.99963 * 299.98998 * 20 19 18 41 41 H 1.48495 * 110.00123 * 180.02562 * 21 19 18 42 42 H 1.48503 * 109.99960 * 301.32191 * 21 19 18 43 43 H 1.08006 * 119.96906 * 180.02562 * 22 18 17 44 44 H 1.08005 * 120.02879 * 180.02562 * 23 22 18 45 45 H 1.09003 * 113.61068 * 270.88390 * 24 8 7 46 46 H 1.08999 * 113.61730 * 139.98238 * 24 8 7 47 47 H 1.08004 * 119.99437 * 179.97438 * 25 4 3 48 48 H 1.07998 * 119.99837 * 180.23023 * 26 25 4 49 49 H 1.08002 * 120.00200 * 179.78851 * 27 26 25 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.1980 1.1970 0.0000 4 6 3.5806 1.1971 -0.0005 5 6 4.3340 2.5022 -0.0011 6 1 3.6924 3.3615 0.1940 7 6 5.6105 2.4770 0.8561 8 6 6.2808 3.2977 -0.2585 9 1 7.3075 2.9959 -0.4657 10 7 6.1364 4.7459 -0.0911 11 6 7.1969 5.4907 0.2789 12 8 8.2708 4.9618 0.4738 13 6 7.0485 6.9805 0.4505 14 8 8.3026 7.5421 0.8427 15 6 8.3417 8.8860 1.0413 16 6 7.1979 9.6492 0.8568 17 6 7.2387 11.0142 1.0653 18 6 8.4212 11.6216 1.4455 19 6 8.4645 13.1117 1.6658 20 8 8.8516 13.3829 3.0144 21 14 6.7780 13.8360 1.3462 22 6 9.5638 10.8639 1.6246 23 6 9.5267 9.4977 1.4233 24 6 5.2516 2.6832 -1.2218 25 6 4.2717 0.0001 -0.0005 26 6 3.5805 -1.1972 0.0040 27 6 2.1984 -1.1973 -0.0009 28 1 -0.3633 -0.0005 1.0277 29 1 -0.3634 0.8901 -0.5134 30 1 -0.3633 -0.8898 -0.5142 31 1 1.6580 2.1323 -0.0004 32 1 5.5145 3.0167 1.7982 33 1 6.0341 1.4802 0.9793 34 1 5.2773 5.1688 -0.2466 35 1 6.7308 7.4250 -0.4927 36 1 6.3023 7.1853 1.2182 37 1 6.2751 9.1758 0.5554 38 1 6.3473 11.6080 0.9268 39 1 9.1872 13.5590 0.9833 40 1 8.2523 13.0139 3.6774 41 1 6.8076 15.3053 1.5595 42 1 6.3503 13.5334 -0.0433 43 1 10.4862 11.3407 1.9220 44 1 10.4194 8.9063 1.5637 45 1 5.5771 1.7428 -1.6667 46 1 4.8659 3.3893 -1.9572 47 1 5.3517 0.0003 -0.0014 48 1 4.1205 -2.1325 0.0078 49 1 1.6584 -2.1326 -0.0008 There are 65 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 65 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_9650858_2989410.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:52:10 Heat of formation + Delta-G solvation = -24.788955 kcal Electronic energy + Delta-G solvation = -29173.866026 eV Core-core repulsion = 25033.474293 eV Total energy + Delta-G solvation = -4140.391733 eV No. of doubly occupied orbitals = 65 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 354.166 amu Computer time = 0.61 seconds Orbital eigenvalues (eV) -41.80935 -41.30638 -40.34975 -39.28369 -38.61879 -37.12113 -34.85497 -33.42479 -32.46059 -31.97465 -31.72360 -29.66466 -27.85839 -26.81928 -26.41864 -25.97774 -24.09071 -23.11003 -22.64047 -22.08714 -21.77069 -19.97605 -19.53093 -18.49730 -18.21008 -17.70325 -17.48481 -17.15573 -16.84750 -16.55182 -16.26328 -16.12259 -15.96523 -15.60172 -15.55574 -15.19235 -14.92607 -14.79684 -14.71336 -14.46241 -14.27219 -14.07063 -13.92645 -13.77169 -13.62494 -13.54849 -13.44329 -13.14904 -12.82909 -12.76007 -12.25252 -12.23693 -12.13769 -12.06678 -11.79127 -11.76022 -11.73787 -11.27238 -10.95185 -10.43729 -10.22558 -10.06815 -9.70450 -9.47727 -9.23367 -5.07452 0.26866 0.27876 0.39643 0.46522 1.27952 1.36660 1.41949 1.59194 1.94879 2.48427 2.64295 2.75746 3.31993 3.38892 3.46586 3.55091 3.59118 3.65880 3.70578 3.80179 3.84260 3.85690 3.86326 3.92996 3.99062 4.06157 4.19333 4.24393 4.40970 4.41992 4.46632 4.49212 4.54239 4.61940 4.62316 4.67128 4.68005 4.71022 4.82527 4.89140 4.91856 4.92959 5.00665 5.12475 5.13226 5.21900 5.22671 5.40823 5.48596 5.55923 5.65890 5.66880 5.70034 6.08928 6.18390 6.32655 6.57465 7.03540 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.117 4.117 2 C -0.084 4.084 3 C -0.117 4.117 4 C -0.068 4.068 5 C -0.073 4.073 6 H 0.097 0.903 7 C -0.143 4.143 8 C 0.120 3.880 9 H 0.107 0.893 10 N -0.710 5.710 11 C 0.518 3.482 12 O -0.509 6.509 13 C 0.040 3.960 14 O -0.288 6.288 15 C 0.134 3.866 16 C -0.206 4.206 17 C -0.076 4.076 18 C -0.157 4.157 19 C -0.063 4.063 20 O -0.541 6.541 21 Si 0.687 3.313 22 C -0.051 4.051 23 C -0.145 4.145 24 C -0.134 4.134 25 C -0.123 4.123 26 C -0.113 4.113 27 C -0.125 4.125 28 H 0.071 0.929 29 H 0.066 0.934 30 H 0.067 0.933 31 H 0.120 0.880 32 H 0.075 0.925 33 H 0.097 0.903 34 H 0.403 0.597 35 H 0.095 0.905 36 H 0.096 0.904 37 H 0.132 0.868 38 H 0.130 0.870 39 H 0.113 0.887 40 H 0.379 0.621 41 H -0.255 1.255 42 H -0.259 1.259 43 H 0.135 0.865 44 H 0.136 0.864 45 H 0.100 0.900 46 H 0.077 0.923 47 H 0.122 0.878 48 H 0.122 0.878 49 H 0.121 0.879 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -6.933 -0.831 -0.252 6.987 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.173 4.173 2 C -0.084 4.084 3 C -0.135 4.135 4 C -0.068 4.068 5 C -0.091 4.091 6 H 0.115 0.885 7 C -0.182 4.182 8 C 0.015 3.985 9 H 0.125 0.875 10 N -0.364 5.364 11 C 0.303 3.697 12 O -0.383 6.383 13 C -0.039 4.039 14 O -0.200 6.200 15 C 0.088 3.912 16 C -0.225 4.225 17 C -0.094 4.094 18 C -0.158 4.158 19 C -0.174 4.174 20 O -0.346 6.346 21 Si 0.589 3.411 22 C -0.069 4.069 23 C -0.164 4.164 24 C -0.172 4.172 25 C -0.141 4.141 26 C -0.131 4.131 27 C -0.143 4.143 28 H 0.090 0.910 29 H 0.085 0.915 30 H 0.086 0.914 31 H 0.138 0.862 32 H 0.094 0.906 33 H 0.115 0.885 34 H 0.237 0.763 35 H 0.113 0.887 36 H 0.114 0.886 37 H 0.149 0.851 38 H 0.147 0.853 39 H 0.130 0.870 40 H 0.226 0.774 41 H -0.180 1.180 42 H -0.184 1.184 43 H 0.153 0.847 44 H 0.154 0.846 45 H 0.118 0.882 46 H 0.096 0.904 47 H 0.140 0.860 48 H 0.140 0.860 49 H 0.139 0.861 Dipole moment (debyes) X Y Z Total from point charges -5.954 -0.481 -0.878 6.037 hybrid contribution -0.212 -0.036 -0.388 0.444 sum -6.166 -0.517 -1.267 6.316 Atomic orbital electron populations 1.20818 0.91114 1.02920 1.02494 1.19952 0.96164 0.93167 0.99095 1.20925 0.93492 0.97567 1.01553 1.19636 0.93384 0.94316 0.99508 1.21594 0.95021 0.95313 0.97214 0.88513 1.23576 0.95257 1.01286 0.98076 1.21883 1.00911 0.78996 0.96700 0.87480 1.45477 1.12597 1.07529 1.70793 1.20036 0.84439 0.88049 0.77162 1.90793 1.26382 1.73280 1.47801 1.22462 0.86964 0.92011 1.02415 1.86175 1.31819 1.18951 1.83080 1.19077 0.94558 0.81907 0.95631 1.21169 0.97988 0.94877 1.08453 1.20789 0.96922 0.94127 0.97528 1.20258 0.94187 0.96446 1.04890 1.24979 1.11361 0.94000 0.87108 1.86503 1.54928 1.78999 1.14206 0.94816 0.80298 0.81032 0.84927 1.20858 0.98257 0.92169 0.95607 1.20540 0.96775 0.94683 1.04362 1.23430 0.95559 1.01983 0.96258 1.20994 0.99907 0.91942 1.01259 1.21155 0.94327 0.98085 0.99489 1.21080 0.94363 0.97620 1.01216 0.91042 0.91492 0.91429 0.86234 0.90636 0.88455 0.76267 0.88687 0.88587 0.85061 0.85317 0.86970 0.77381 1.17994 1.18397 0.84737 0.84622 0.88181 0.90420 0.85989 0.85965 0.86119 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.12 0.14 10.01 36.01 0.36 0.51 16 2 C -0.08 -0.04 5.88 -104.62 -0.62 -0.65 16 3 C -0.12 -0.01 9.37 -39.58 -0.37 -0.38 16 4 C -0.07 0.02 5.29 -104.63 -0.55 -0.53 16 5 C -0.07 0.16 3.86 -90.96 -0.35 -0.19 16 6 H 0.10 -0.32 8.09 -51.93 -0.42 -0.74 16 7 C -0.14 0.21 7.26 -25.91 -0.19 0.02 16 8 C 0.12 -0.16 4.32 -67.11 -0.29 -0.45 16 9 H 0.11 0.07 7.46 -51.93 -0.39 -0.32 16 10 N -0.71 1.53 5.27 -53.02 -0.28 1.25 16 11 C 0.52 0.48 7.91 -10.99 -0.09 0.40 16 12 O -0.51 -3.09 16.10 -14.35 -0.23 -3.32 16 13 C 0.04 -0.06 5.22 36.00 0.19 0.13 16 14 O -0.29 -0.72 9.67 -39.35 -0.38 -1.10 16 15 C 0.13 0.20 6.69 -39.22 -0.26 -0.07 16 16 C -0.21 0.13 9.04 -39.43 -0.36 -0.22 16 17 C -0.08 0.06 8.66 -39.60 -0.34 -0.28 16 18 C -0.16 -0.02 5.39 -104.60 -0.56 -0.58 16 19 C -0.06 0.02 2.82 36.00 0.10 0.12 16 20 O -0.54 -0.12 12.77 -35.23 -0.45 -0.57 16 21 Si 0.69 -0.90 29.78 -169.99 -5.06 -5.96 16 22 C -0.05 -0.04 9.60 -39.61 -0.38 -0.42 16 23 C -0.15 -0.23 9.99 -39.44 -0.39 -0.63 16 24 C -0.13 0.34 7.29 -25.92 -0.19 0.15 16 25 C -0.12 0.00 8.61 -39.58 -0.34 -0.34 16 26 C -0.11 -0.04 10.05 -39.58 -0.40 -0.44 16 27 C -0.12 -0.07 9.70 -39.58 -0.38 -0.45 16 28 H 0.07 -0.11 8.14 -51.93 -0.42 -0.54 16 29 H 0.07 -0.12 8.08 -51.93 -0.42 -0.54 16 30 H 0.07 -0.11 8.09 -51.93 -0.42 -0.53 16 31 H 0.12 -0.17 8.05 -52.49 -0.42 -0.59 16 32 H 0.07 -0.06 8.14 -51.93 -0.42 -0.48 16 33 H 0.10 -0.14 6.31 -51.93 -0.33 -0.47 16 34 H 0.40 -2.14 8.70 -40.82 -0.36 -2.49 16 35 H 0.10 -0.37 7.65 -51.93 -0.40 -0.77 16 36 H 0.10 -0.40 7.67 -51.93 -0.40 -0.79 16 37 H 0.13 -0.45 6.30 -52.49 -0.33 -0.78 16 38 H 0.13 -0.36 4.87 -52.48 -0.26 -0.62 16 39 H 0.11 0.02 7.96 -51.93 -0.41 -0.39 16 40 H 0.38 -1.37 8.70 45.56 0.40 -0.97 16 41 H -0.25 -0.53 7.11 56.52 0.40 -0.13 16 42 H -0.26 -0.23 7.11 56.52 0.40 0.18 16 43 H 0.13 0.01 8.06 -52.48 -0.42 -0.41 16 44 H 0.14 0.16 8.06 -52.48 -0.42 -0.26 16 45 H 0.10 -0.23 7.72 -51.93 -0.40 -0.63 16 46 H 0.08 -0.25 8.14 -51.93 -0.42 -0.67 16 47 H 0.12 -0.17 6.66 -52.48 -0.35 -0.52 16 48 H 0.12 -0.14 8.06 -52.49 -0.42 -0.57 16 49 H 0.12 -0.10 8.06 -52.49 -0.42 -0.52 16 LS Contribution 403.74 15.07 6.08 6.08 Total: 0.00 -9.70 403.74 -12.80 -22.50 By element: Atomic # 1 Polarization: -7.50 SS G_CDS: -7.06 Total: -14.56 kcal Atomic # 6 Polarization: 1.10 SS G_CDS: -5.42 Total: -4.31 kcal Atomic # 7 Polarization: 1.53 SS G_CDS: -0.28 Total: 1.25 kcal Atomic # 8 Polarization: -3.93 SS G_CDS: -1.06 Total: -4.99 kcal Atomic # 14 Polarization: -0.90 SS G_CDS: -5.06 Total: -5.96 kcal Total LS contribution 6.08 Total: 6.08 kcal Total: -9.70 -12.80 -22.50 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9650858_2989410.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -2.291 kcal (2) G-P(sol) polarization free energy of solvation -9.702 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -11.993 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.796 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.498 kcal (6) G-S(sol) free energy of system = (1) + (5) -24.789 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.61 seconds