Wall clock time and date at job start Tue Mar 9 2021 12:52:45 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50706 * 1 3 3 C 1.38211 * 119.99867 * 2 1 4 4 C 1.38262 * 119.99802 * 180.27641 * 3 2 1 5 5 C 1.50703 * 119.99874 * 179.74664 * 4 3 2 6 6 H 1.08997 * 112.90881 * 348.47325 * 5 4 3 7 7 C 1.53779 * 113.61232 * 119.72571 * 5 4 3 8 8 C 1.53782 * 87.07947 * 139.98014 * 7 5 4 9 9 H 1.09002 * 113.61651 * 219.93444 * 8 7 5 10 10 N 1.46496 * 113.61858 * 89.11402 * 8 7 5 11 11 C 1.34775 * 120.00640 * 154.99962 * 10 8 7 12 12 O 1.21285 * 119.99617 * 359.97438 * 11 10 8 13 13 C 1.50693 * 120.00472 * 180.02562 * 11 10 8 14 14 F 1.39903 * 109.47136 * 59.99936 * 13 11 10 15 15 F 1.39897 * 109.47292 * 299.99843 * 13 11 10 16 16 O 1.42900 * 109.47523 * 179.97438 * 13 11 10 17 17 C 1.35892 * 117.00484 * 179.97438 * 16 13 11 18 18 C 1.38732 * 120.05920 * 180.02562 * 17 16 13 19 19 C 1.38149 * 119.94758 * 179.97438 * 18 17 16 20 20 C 1.38269 * 120.05054 * 0.02562 * 19 18 17 21 21 C 1.50700 * 119.93900 * 179.97438 * 20 19 18 22 22 O 1.42896 * 109.47341 * 300.00123 * 21 20 19 23 23 Si 1.86300 * 109.46849 * 180.02562 * 21 20 19 24 24 C 1.38264 * 120.11486 * 0.27666 * 20 19 18 25 25 C 1.38143 * 120.05501 * 359.44957 * 24 20 19 26 26 C 1.53777 * 87.08242 * 334.56562 * 8 7 5 27 27 C 1.38212 * 119.99900 * 359.47376 * 4 3 2 28 28 C 1.38259 * 119.99807 * 0.24960 * 27 4 3 29 29 C 1.38214 * 120.00246 * 0.02562 * 28 27 4 30 30 H 1.09003 * 109.46993 * 270.27457 * 1 2 3 31 31 H 1.08997 * 109.46816 * 30.27112 * 1 2 3 32 32 H 1.08999 * 109.47107 * 150.27159 * 1 2 3 33 33 H 1.07998 * 120.00560 * 0.02598 * 3 2 1 34 34 H 1.09000 * 113.61681 * 25.43722 * 7 5 4 35 35 H 1.09000 * 113.61366 * 254.52545 * 7 5 4 36 36 H 0.97006 * 120.00029 * 335.00370 * 10 8 7 37 37 H 1.08000 * 120.02660 * 359.96129 * 18 17 16 38 38 H 1.07992 * 119.97601 * 179.97438 * 19 18 17 39 39 H 1.09000 * 109.46989 * 60.00454 * 21 20 19 40 40 H 0.96693 * 114.00306 * 299.99773 * 22 21 20 41 41 H 1.48506 * 110.00048 * 58.68772 * 23 21 20 42 42 H 1.48502 * 109.99996 * 180.02562 * 23 21 20 43 43 H 1.08003 * 119.97236 * 179.73093 * 24 20 19 44 44 H 1.08000 * 120.02735 * 180.28019 * 25 24 20 45 45 H 1.09007 * 113.61580 * 139.98085 * 26 8 7 46 46 H 1.09005 * 113.61947 * 270.88555 * 26 8 7 47 47 H 1.07998 * 120.00001 * 180.27568 * 27 4 3 48 48 H 1.07998 * 119.99310 * 180.02562 * 28 27 4 49 49 H 1.07999 * 119.99769 * 179.97438 * 29 28 27 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5071 0.0000 0.0000 3 6 2.1981 1.1970 0.0000 4 6 3.5807 1.1969 -0.0058 5 6 4.3342 2.5021 -0.0115 6 1 3.6935 3.3610 -0.2112 7 6 5.2523 2.6887 1.2079 8 6 6.2810 3.2986 0.2412 9 1 7.3080 2.9989 0.4502 10 7 6.1354 4.7457 0.0656 11 6 7.1953 5.4894 -0.3085 12 8 8.2700 4.9605 -0.4994 13 6 7.0456 6.9780 -0.4885 14 9 6.6372 7.5550 0.7187 15 9 6.0878 7.2344 -1.4755 16 8 8.2992 7.5386 -0.8838 17 6 8.3372 8.8812 -1.0900 18 6 9.5217 9.4918 -1.4758 19 6 9.5575 10.8568 -1.6853 20 6 8.4142 11.6145 -1.5102 21 6 8.4563 13.1034 -1.7389 22 8 9.4036 13.6956 -0.8479 23 14 6.7696 13.8282 -1.4222 24 6 7.2340 11.0093 -1.1197 25 6 7.1916 9.6438 -0.9144 26 6 5.6103 2.4728 -0.8692 27 6 4.2717 0.0000 -0.0006 28 6 3.5804 -1.1973 0.0052 29 6 2.1983 -1.1973 0.0052 30 1 -0.3633 0.0049 1.0277 31 1 -0.3633 0.8875 -0.5180 32 1 -0.3633 -0.8924 -0.5096 33 1 1.6582 2.1323 0.0004 34 1 5.5780 1.7504 1.6569 35 1 4.8670 3.3982 1.9401 36 1 5.2760 5.1688 0.2186 37 1 10.4151 8.9005 -1.6121 38 1 10.4794 11.3327 -1.9852 39 1 8.7511 13.3047 -2.7688 40 1 9.2039 13.5563 0.0879 41 1 6.3431 13.5333 -0.0306 42 1 6.7975 15.2962 -1.6449 43 1 6.3434 11.6039 -0.9794 44 1 6.2683 9.1710 -0.6137 45 1 5.5139 3.0081 -1.8138 46 1 6.0337 1.4754 -0.9880 47 1 5.3517 0.0000 -0.0006 48 1 4.1205 -2.1325 0.0097 49 1 1.6583 -2.1326 0.0093 There are 71 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 71 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_9650858_4549640.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:52:45 Heat of formation + Delta-G solvation = -111.342616 kcal Electronic energy + Delta-G solvation = -35263.439097 eV Core-core repulsion = 30180.386164 eV Total energy + Delta-G solvation = -5083.052933 eV No. of doubly occupied orbitals = 71 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 390.148 amu Computer time = 0.88 seconds Orbital eigenvalues (eV) -50.91494 -48.88312 -41.82615 -41.37284 -40.59050 -39.41953 -38.93779 -37.38093 -35.16019 -33.37686 -32.46984 -32.09272 -31.88664 -29.17632 -27.77259 -26.73085 -26.58346 -25.92171 -24.52268 -23.07112 -22.98815 -22.49206 -22.06067 -20.66715 -20.16138 -19.71289 -19.64914 -18.66241 -17.90299 -17.55635 -17.34084 -16.94561 -16.68524 -16.46948 -16.32493 -16.25932 -16.00310 -15.88392 -15.74497 -15.43278 -15.37582 -15.21500 -15.12580 -14.98074 -14.73796 -14.54311 -14.40514 -14.38539 -14.23656 -14.01030 -13.83072 -13.54905 -13.48098 -13.04385 -13.03281 -12.86625 -12.71848 -12.42921 -12.26819 -12.16904 -11.83129 -11.75479 -11.69635 -11.54304 -11.23580 -10.65666 -10.51187 -10.19168 -9.66301 -9.60380 -9.43474 -4.93217 0.00598 0.14997 0.41937 0.43805 0.50069 0.59705 1.29509 1.58898 1.65212 1.94942 1.96527 2.44512 2.72620 2.79923 3.19728 3.36725 3.38633 3.53502 3.58378 3.63912 3.66621 3.71204 3.89780 4.00792 4.07795 4.08585 4.16200 4.20021 4.27868 4.39568 4.43836 4.50939 4.57044 4.58667 4.69346 4.72455 4.74944 4.80559 4.82403 4.88399 4.90119 4.97790 4.98531 5.02678 5.03728 5.19291 5.31200 5.32781 5.33600 5.38525 5.60320 5.71922 5.74463 5.79641 5.84131 6.15230 6.42877 6.47283 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.116 4.116 2 C -0.098 4.098 3 C -0.129 4.129 4 C -0.073 4.073 5 C -0.070 4.070 6 H 0.111 0.889 7 C -0.122 4.122 8 C 0.112 3.888 9 H 0.103 0.897 10 N -0.669 5.669 11 C 0.519 3.481 12 O -0.506 6.506 13 C 0.435 3.565 14 F -0.171 7.171 15 F -0.169 7.169 16 O -0.305 6.305 17 C 0.085 3.915 18 C -0.136 4.136 19 C -0.058 4.058 20 C -0.139 4.139 21 C -0.077 4.077 22 O -0.547 6.547 23 Si 0.761 3.239 24 C -0.077 4.077 25 C -0.193 4.193 26 C -0.141 4.141 27 C -0.132 4.132 28 C -0.125 4.125 29 C -0.141 4.141 30 H 0.074 0.926 31 H 0.072 0.928 32 H 0.069 0.931 33 H 0.132 0.868 34 H 0.108 0.892 35 H 0.091 0.909 36 H 0.423 0.577 37 H 0.144 0.856 38 H 0.150 0.850 39 H 0.131 0.869 40 H 0.386 0.614 41 H -0.282 1.282 42 H -0.301 1.301 43 H 0.154 0.846 44 H 0.142 0.858 45 H 0.072 0.928 46 H 0.105 0.895 47 H 0.135 0.865 48 H 0.133 0.867 49 H 0.127 0.873 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -5.843 -1.784 0.374 6.121 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.173 4.173 2 C -0.098 4.098 3 C -0.147 4.147 4 C -0.073 4.073 5 C -0.088 4.088 6 H 0.129 0.871 7 C -0.159 4.159 8 C 0.008 3.992 9 H 0.121 0.879 10 N -0.322 5.322 11 C 0.298 3.702 12 O -0.379 6.379 13 C 0.358 3.642 14 F -0.153 7.153 15 F -0.150 7.150 16 O -0.222 6.222 17 C 0.043 3.957 18 C -0.154 4.154 19 C -0.076 4.076 20 C -0.139 4.139 21 C -0.186 4.186 22 O -0.355 6.355 23 Si 0.667 3.333 24 C -0.095 4.095 25 C -0.211 4.211 26 C -0.179 4.179 27 C -0.150 4.150 28 C -0.143 4.143 29 C -0.159 4.159 30 H 0.093 0.907 31 H 0.091 0.909 32 H 0.088 0.912 33 H 0.150 0.850 34 H 0.126 0.874 35 H 0.110 0.890 36 H 0.262 0.738 37 H 0.162 0.838 38 H 0.168 0.832 39 H 0.148 0.852 40 H 0.236 0.764 41 H -0.209 1.209 42 H -0.229 1.229 43 H 0.171 0.829 44 H 0.160 0.840 45 H 0.091 0.909 46 H 0.123 0.877 47 H 0.153 0.847 48 H 0.150 0.850 49 H 0.145 0.855 Dipole moment (debyes) X Y Z Total from point charges -5.154 -1.569 0.147 5.390 hybrid contribution 0.137 0.195 1.040 1.067 sum -5.017 -1.374 1.187 5.336 Atomic orbital electron populations 1.20838 0.90252 1.03350 1.02827 1.20220 0.97064 0.93377 0.99125 1.21175 0.93936 0.98062 1.01530 1.19799 0.93443 0.94842 0.99176 1.21644 0.94852 0.95228 0.97045 0.87124 1.23402 0.94137 1.02318 0.96082 1.22150 1.01504 0.77050 0.98513 0.87927 1.45426 1.11923 1.08428 1.66418 1.19378 0.85956 0.85277 0.79618 1.90860 1.27158 1.71219 1.48689 1.21726 0.76708 0.91229 0.74571 1.93198 1.90264 1.86182 1.45627 1.93200 1.64571 1.94945 1.62307 1.86644 1.30386 1.22236 1.82935 1.19250 0.96479 0.80345 0.99652 1.20706 0.96306 0.95341 1.03095 1.21054 0.99078 0.91495 0.95938 1.20428 0.94063 0.96872 1.02583 1.25178 1.05131 0.90212 0.98117 1.86575 1.50412 1.77582 1.20917 0.94146 0.77578 0.77960 0.83656 1.21027 0.98087 0.93641 0.96697 1.21608 0.97561 0.95823 1.06149 1.23586 0.95427 1.01258 0.97626 1.21211 1.00657 0.91945 1.01195 1.21393 0.94486 0.98871 0.99541 1.21301 0.94803 0.98144 1.01670 0.90689 0.90907 0.91199 0.84996 0.87381 0.89025 0.73822 0.83781 0.83231 0.85170 0.76431 1.20862 1.22932 0.82860 0.84012 0.90935 0.87702 0.84736 0.84952 0.85457 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.12 0.31 10.01 71.24 0.71 1.02 16 2 C -0.10 -0.07 5.88 -19.87 -0.12 -0.19 16 3 C -0.13 0.06 9.37 22.27 0.21 0.27 16 4 C -0.07 0.12 5.29 -19.86 -0.11 0.02 16 5 C -0.07 0.41 3.86 -11.01 -0.04 0.37 16 6 H 0.11 -0.91 8.10 -2.39 -0.02 -0.93 16 7 C -0.12 0.87 7.29 31.12 0.23 1.10 16 8 C 0.11 -0.45 4.32 45.52 0.20 -0.26 16 9 H 0.10 -0.11 7.46 -2.39 -0.02 -0.13 16 10 N -0.67 2.30 5.26 -440.05 -2.32 -0.02 16 11 C 0.52 1.93 7.34 87.66 0.64 2.58 16 12 O -0.51 -5.65 16.10 15.99 0.26 -5.39 16 13 C 0.44 1.51 2.05 71.23 0.15 1.66 16 14 F -0.17 -0.31 15.29 44.97 0.69 0.37 16 15 F -0.17 -0.24 15.29 44.97 0.69 0.44 16 16 O -0.30 -2.45 9.60 -73.30 -0.70 -3.15 16 17 C 0.09 0.49 6.48 22.51 0.15 0.63 16 18 C -0.14 -0.49 9.99 22.37 0.22 -0.27 16 19 C -0.06 -0.06 9.60 22.26 0.21 0.15 16 20 C -0.14 0.02 5.39 -19.85 -0.11 -0.09 16 21 C -0.08 0.13 2.82 71.24 0.20 0.33 16 22 O -0.55 -0.82 12.76 -148.98 -1.90 -2.72 16 23 Si 0.76 -2.09 29.78 68.60 2.04 -0.05 16 24 C -0.08 0.04 8.66 22.25 0.19 0.23 16 25 C -0.19 -0.49 8.26 22.37 0.18 -0.31 16 26 C -0.14 0.63 7.25 31.12 0.23 0.86 16 27 C -0.13 0.14 8.61 22.27 0.19 0.34 16 28 C -0.12 -0.03 10.05 22.27 0.22 0.20 16 29 C -0.14 -0.15 9.70 22.27 0.22 0.06 16 30 H 0.07 -0.26 8.14 -2.39 -0.02 -0.28 16 31 H 0.07 -0.29 8.09 -2.39 -0.02 -0.31 16 32 H 0.07 -0.23 8.09 -2.39 -0.02 -0.25 16 33 H 0.13 -0.49 8.06 -2.91 -0.02 -0.52 16 34 H 0.11 -0.78 7.72 -2.39 -0.02 -0.80 16 35 H 0.09 -0.81 8.14 -2.39 -0.02 -0.83 16 36 H 0.42 -3.73 8.70 -92.70 -0.81 -4.53 16 37 H 0.14 0.28 8.06 -2.91 -0.02 0.26 16 38 H 0.15 -0.22 8.06 -2.91 -0.02 -0.24 16 39 H 0.13 -0.47 7.96 -2.39 -0.02 -0.49 16 40 H 0.39 -1.45 8.70 -74.06 -0.64 -2.10 16 41 H -0.28 -0.29 7.11 99.48 0.71 0.41 16 42 H -0.30 -1.53 7.11 99.48 0.71 -0.82 16 43 H 0.15 -0.78 4.87 -2.91 -0.01 -0.80 16 44 H 0.14 0.08 5.10 -2.91 -0.01 0.07 16 45 H 0.07 -0.21 8.14 -2.38 -0.02 -0.23 16 46 H 0.10 -0.52 6.31 -2.38 -0.02 -0.53 16 47 H 0.13 -0.59 6.66 -2.91 -0.02 -0.61 16 48 H 0.13 -0.37 8.06 -2.91 -0.02 -0.40 16 49 H 0.13 -0.18 8.06 -2.91 -0.02 -0.20 16 Total: 0.00 -18.21 413.01 2.15 -16.07 By element: Atomic # 1 Polarization: -13.87 SS G_CDS: -0.39 Total: -14.26 kcal Atomic # 6 Polarization: 4.92 SS G_CDS: 3.78 Total: 8.70 kcal Atomic # 7 Polarization: 2.30 SS G_CDS: -2.32 Total: -0.02 kcal Atomic # 8 Polarization: -8.92 SS G_CDS: -2.35 Total: -11.27 kcal Atomic # 9 Polarization: -0.56 SS G_CDS: 1.38 Total: 0.82 kcal Atomic # 14 Polarization: -2.09 SS G_CDS: 2.04 Total: -0.05 kcal Total: -18.21 2.15 -16.07 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9650858_4549640.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -95.276 kcal (2) G-P(sol) polarization free energy of solvation -18.215 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -113.491 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 2.148 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -16.067 kcal (6) G-S(sol) free energy of system = (1) + (5) -111.343 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.88 seconds