Wall clock time and date at job start Tue Mar 9 2021 12:52:53 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50699 * 1 3 3 C 1.38211 * 120.00354 * 2 1 4 4 C 1.38260 * 120.00044 * 180.24931 * 3 2 1 5 5 C 1.50699 * 119.99883 * 179.76380 * 4 3 2 6 6 H 1.09003 * 112.85141 * 348.53094 * 5 4 3 7 7 C 1.53778 * 113.61329 * 119.72884 * 5 4 3 8 8 C 1.53781 * 87.08077 * 140.06385 * 7 5 4 9 9 H 1.09003 * 113.61175 * 219.93623 * 8 7 5 10 10 N 1.46500 * 113.61496 * 89.11909 * 8 7 5 11 11 C 1.34771 * 120.00273 * 155.00107 * 10 8 7 12 12 O 1.21287 * 119.99947 * 359.97438 * 11 10 8 13 13 C 1.50699 * 120.00100 * 179.97438 * 11 10 8 14 14 O 1.42903 * 109.46855 * 179.97438 * 13 11 10 15 15 C 1.35905 * 116.99613 * 179.97438 * 14 13 11 16 16 C 1.38714 * 120.05255 * 180.25166 * 15 14 13 17 17 C 1.38167 * 119.94097 * 180.25813 * 16 15 14 18 18 C 1.50702 * 119.97190 * 179.75193 * 17 16 15 19 19 O 1.42892 * 109.47242 * 64.71938 * 18 17 16 20 20 Si 1.86298 * 109.46915 * 184.72476 * 18 17 16 21 21 C 1.38245 * 120.05417 * 359.46773 * 17 16 15 22 22 C 1.38285 * 120.11218 * 0.28234 * 21 17 16 23 23 C 1.38114 * 120.05813 * 359.97438 * 22 21 17 24 24 C 1.53778 * 113.68840 * 217.26517 * 5 4 3 25 25 C 1.38210 * 119.99722 * 359.49451 * 4 3 2 26 26 C 1.38251 * 120.00239 * 0.24895 * 25 4 3 27 27 C 1.38219 * 120.00225 * 0.02562 * 26 25 4 28 28 H 1.09001 * 109.47586 * 270.23606 * 1 2 3 29 29 H 1.08999 * 109.47069 * 30.23579 * 1 2 3 30 30 H 1.08999 * 109.47328 * 150.23009 * 1 2 3 31 31 H 1.08004 * 119.99921 * 0.02562 * 3 2 1 32 32 H 1.09003 * 113.61837 * 25.51540 * 7 5 4 33 33 H 1.09004 * 113.61748 * 254.61185 * 7 5 4 34 34 H 0.97006 * 119.99768 * 334.99417 * 10 8 7 35 35 H 1.08999 * 109.46951 * 59.99946 * 13 11 10 36 36 H 1.08999 * 109.47268 * 299.99561 * 13 11 10 37 37 H 1.08001 * 120.03235 * 359.97438 * 16 15 14 38 38 H 1.09000 * 109.46724 * 304.71984 * 18 17 16 39 39 H 0.96703 * 114.00176 * 180.02562 * 19 18 17 40 40 H 1.48506 * 109.99834 * 178.68053 * 20 18 17 41 41 H 1.48502 * 110.00011 * 299.99318 * 20 18 17 42 42 H 1.08005 * 119.94046 * 180.25212 * 21 17 16 43 43 H 1.08004 * 119.97228 * 179.97438 * 22 21 17 44 44 H 1.07997 * 120.03410 * 179.97438 * 23 22 21 45 45 H 1.08997 * 113.61753 * 105.46294 * 24 5 4 46 46 H 1.09006 * 113.61746 * 334.55190 * 24 5 4 47 47 H 1.07997 * 119.99769 * 180.27967 * 25 4 3 48 48 H 1.08004 * 120.00048 * 180.02562 * 26 25 4 49 49 H 1.07996 * 120.00281 * 179.97438 * 27 26 25 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.1981 1.1969 0.0000 4 6 3.5807 1.1968 -0.0052 5 6 4.3342 2.5019 -0.0106 6 1 3.6926 3.3603 -0.2096 7 6 5.2519 2.6883 1.2092 8 6 6.2802 3.3004 0.2433 9 1 7.3074 3.0016 0.4523 10 7 6.1329 4.7475 0.0692 11 6 7.1921 5.4926 -0.3040 12 8 8.2674 4.9652 -0.4953 13 6 7.0405 6.9812 -0.4836 14 8 8.2937 7.5435 -0.8778 15 6 8.3299 8.8864 -1.0836 16 6 9.5126 9.4979 -1.4729 17 6 9.5481 10.8640 -1.6762 18 6 10.8339 11.5298 -2.0939 19 8 11.2125 11.0637 -3.3905 20 14 10.5893 13.3760 -2.1445 21 6 8.4036 11.6199 -1.5026 22 6 7.2222 11.0119 -1.1195 23 6 7.1827 9.6473 -0.9099 24 6 5.6105 2.4749 -0.8680 25 6 4.2717 -0.0001 0.0001 26 6 3.5804 -1.1974 0.0055 27 6 2.1982 -1.1974 0.0050 28 1 -0.3634 0.0042 1.0276 29 1 -0.3633 0.8879 -0.5175 30 1 -0.3634 -0.8920 -0.5102 31 1 1.6581 2.1323 0.0004 32 1 5.5786 1.7500 1.6574 33 1 4.8657 3.3968 1.9421 34 1 5.2730 5.1695 0.2224 35 1 6.7211 7.4300 0.4570 36 1 6.2945 7.1802 -1.2530 37 1 10.4059 8.9073 -1.6126 38 1 11.6183 11.2868 -1.3770 39 1 12.0336 11.4509 -3.7234 40 1 11.8589 14.0463 -2.5242 41 1 9.5223 13.7204 -3.1183 42 1 8.4325 12.6871 -1.6660 43 1 6.3295 11.6046 -0.9841 44 1 6.2599 9.1729 -0.6103 45 1 5.5137 3.0110 -1.8121 46 1 6.0352 1.4781 -0.9877 47 1 5.3516 -0.0002 0.0006 48 1 4.1203 -2.1327 0.0101 49 1 1.6582 -2.1326 0.0087 There are 65 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 65 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_9650858_4860298.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:52:53 Heat of formation + Delta-G solvation = -22.474776 kcal Electronic energy + Delta-G solvation = -29209.426427 eV Core-core repulsion = 25069.135044 eV Total energy + Delta-G solvation = -4140.291383 eV No. of doubly occupied orbitals = 65 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 354.166 amu Computer time = 0.61 seconds Orbital eigenvalues (eV) -41.77358 -41.25163 -40.30883 -39.19981 -38.53945 -37.33947 -34.82595 -33.40796 -32.58953 -32.08716 -31.50685 -29.32120 -27.84210 -26.82883 -26.79913 -26.03885 -23.63573 -23.09967 -22.91022 -21.96655 -21.56495 -19.93043 -19.18731 -18.52121 -18.33166 -17.71430 -17.43837 -17.40778 -17.05466 -16.77482 -16.33927 -16.09369 -15.80210 -15.61901 -15.54235 -15.04111 -14.89142 -14.78112 -14.53464 -14.42422 -14.09541 -14.03045 -13.87950 -13.71558 -13.61908 -13.53392 -13.30147 -13.13712 -12.83571 -12.73103 -12.47304 -12.22429 -12.15113 -11.98238 -11.77956 -11.72899 -11.65041 -11.25394 -10.91441 -10.52089 -10.19666 -9.88922 -9.69141 -9.46411 -9.23444 -4.96271 0.22693 0.40965 0.44127 0.47812 1.24476 1.42884 1.45698 1.60007 1.95172 2.52479 2.65132 2.77085 3.33869 3.34924 3.44036 3.57165 3.61708 3.74243 3.79120 3.82619 3.89717 3.90265 3.94653 4.00471 4.06014 4.07791 4.20678 4.22637 4.25293 4.42239 4.48217 4.53246 4.56013 4.62513 4.64010 4.68070 4.69671 4.73175 4.84044 4.91291 4.93313 4.99659 5.02861 5.14208 5.23137 5.25298 5.37697 5.43029 5.49438 5.57202 5.66650 5.68156 5.71429 6.10220 6.23377 6.38191 6.44484 7.07103 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.117 4.117 2 C -0.084 4.084 3 C -0.117 4.117 4 C -0.068 4.068 5 C -0.073 4.073 6 H 0.096 0.904 7 C -0.134 4.134 8 C 0.120 3.880 9 H 0.107 0.893 10 N -0.711 5.711 11 C 0.519 3.481 12 O -0.509 6.509 13 C 0.041 3.959 14 O -0.288 6.288 15 C 0.128 3.872 16 C -0.119 4.119 17 C -0.033 4.033 18 C -0.079 4.079 19 O -0.534 6.534 20 Si 0.689 3.311 21 C -0.152 4.152 22 C -0.073 4.073 23 C -0.206 4.206 24 C -0.144 4.144 25 C -0.123 4.123 26 C -0.113 4.113 27 C -0.125 4.125 28 H 0.071 0.929 29 H 0.066 0.934 30 H 0.067 0.933 31 H 0.120 0.880 32 H 0.100 0.900 33 H 0.077 0.923 34 H 0.403 0.597 35 H 0.096 0.904 36 H 0.095 0.905 37 H 0.134 0.866 38 H 0.079 0.921 39 H 0.381 0.619 40 H -0.261 1.261 41 H -0.255 1.255 42 H 0.130 0.870 43 H 0.132 0.868 44 H 0.130 0.870 45 H 0.075 0.925 46 H 0.097 0.903 47 H 0.122 0.878 48 H 0.122 0.878 49 H 0.121 0.879 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.898 2.059 3.738 6.496 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.173 4.173 2 C -0.084 4.084 3 C -0.135 4.135 4 C -0.068 4.068 5 C -0.092 4.092 6 H 0.115 0.885 7 C -0.172 4.172 8 C 0.015 3.985 9 H 0.125 0.875 10 N -0.364 5.364 11 C 0.303 3.697 12 O -0.382 6.382 13 C -0.038 4.038 14 O -0.201 6.201 15 C 0.083 3.917 16 C -0.138 4.138 17 C -0.033 4.033 18 C -0.189 4.189 19 O -0.342 6.342 20 Si 0.590 3.410 21 C -0.169 4.169 22 C -0.091 4.091 23 C -0.225 4.225 24 C -0.182 4.182 25 C -0.141 4.141 26 C -0.131 4.131 27 C -0.143 4.143 28 H 0.090 0.910 29 H 0.085 0.915 30 H 0.086 0.914 31 H 0.138 0.862 32 H 0.118 0.882 33 H 0.096 0.904 34 H 0.237 0.763 35 H 0.114 0.886 36 H 0.113 0.887 37 H 0.152 0.848 38 H 0.097 0.903 39 H 0.229 0.771 40 H -0.186 1.186 41 H -0.180 1.180 42 H 0.147 0.853 43 H 0.150 0.850 44 H 0.148 0.852 45 H 0.093 0.907 46 H 0.115 0.885 47 H 0.140 0.860 48 H 0.140 0.860 49 H 0.139 0.861 Dipole moment (debyes) X Y Z Total from point charges -4.452 1.916 3.153 5.782 hybrid contribution 0.016 -0.297 -0.747 0.804 sum -4.436 1.619 2.406 5.300 Atomic orbital electron populations 1.20817 0.91118 1.02927 1.02477 1.19949 0.96159 0.93164 0.99101 1.20925 0.93496 0.97570 1.01556 1.19636 0.93380 0.94316 0.99475 1.21592 0.95029 0.95303 0.97238 0.88530 1.23428 0.95560 1.01975 0.96240 1.21882 1.00905 0.79036 0.96651 0.87464 1.45476 1.12590 1.07605 1.70752 1.20046 0.84448 0.88046 0.77137 1.90793 1.26267 1.73299 1.47887 1.22450 0.87017 0.91972 1.02345 1.86170 1.31750 1.19023 1.83125 1.19003 0.94491 0.81997 0.96195 1.20248 0.96961 0.93776 1.02795 1.19028 0.93743 0.92846 0.97724 1.24863 0.96667 1.10413 0.86909 1.86603 1.46396 1.68808 1.32352 0.94964 0.81050 0.74255 0.90745 1.20928 0.92542 0.99726 1.03730 1.20874 0.97794 0.93818 0.96572 1.21282 0.97674 0.95378 1.08128 1.23574 0.95275 1.01265 0.98114 1.20991 0.99911 0.91941 1.01253 1.21155 0.94323 0.98083 0.99496 1.21081 0.94365 0.97617 1.01240 0.91046 0.91496 0.91433 0.86237 0.88182 0.90406 0.76278 0.88636 0.88726 0.84759 0.90311 0.77137 1.18633 1.17961 0.85294 0.84997 0.85210 0.90655 0.88470 0.85989 0.85968 0.86120 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.12 0.12 10.01 36.01 0.36 0.48 16 2 C -0.08 -0.06 5.88 -104.62 -0.62 -0.67 16 3 C -0.12 -0.04 9.37 -39.58 -0.37 -0.41 16 4 C -0.07 0.00 5.29 -104.62 -0.55 -0.55 16 5 C -0.07 0.13 3.85 -90.96 -0.35 -0.22 16 6 H 0.10 -0.28 8.10 -51.93 -0.42 -0.70 16 7 C -0.13 0.31 7.29 -25.92 -0.19 0.12 16 8 C 0.12 -0.11 4.32 -67.12 -0.29 -0.40 16 9 H 0.11 0.10 7.46 -51.93 -0.39 -0.28 16 10 N -0.71 1.19 5.26 -53.02 -0.28 0.91 16 11 C 0.52 0.79 7.91 -10.99 -0.09 0.71 16 12 O -0.51 -3.39 16.10 -14.36 -0.23 -3.63 16 13 C 0.04 -0.03 5.22 36.01 0.19 0.16 16 14 O -0.29 -1.01 9.67 -39.35 -0.38 -1.39 16 15 C 0.13 0.34 6.69 -39.21 -0.26 0.08 16 16 C -0.12 -0.39 9.62 -39.43 -0.38 -0.77 16 17 C -0.03 -0.07 5.38 -104.64 -0.56 -0.63 16 18 C -0.08 -0.05 2.79 36.01 0.10 0.05 16 19 O -0.53 -1.09 12.81 -35.23 -0.45 -1.54 16 20 Si 0.69 -0.49 29.85 -169.99 -5.07 -5.56 16 21 C -0.15 -0.11 8.67 -39.56 -0.34 -0.45 16 22 C -0.07 0.01 10.04 -39.61 -0.40 -0.39 16 23 C -0.21 -0.04 9.04 -39.44 -0.36 -0.40 16 24 C -0.14 0.15 7.26 -25.92 -0.19 -0.04 16 25 C -0.12 -0.03 8.61 -39.59 -0.34 -0.37 16 26 C -0.11 -0.06 10.05 -39.58 -0.40 -0.46 16 27 C -0.13 -0.10 9.70 -39.58 -0.38 -0.48 16 28 H 0.07 -0.11 8.14 -51.93 -0.42 -0.53 16 29 H 0.07 -0.11 8.09 -51.93 -0.42 -0.53 16 30 H 0.07 -0.10 8.09 -51.93 -0.42 -0.52 16 31 H 0.12 -0.14 8.06 -52.48 -0.42 -0.56 16 32 H 0.10 -0.21 7.72 -51.93 -0.40 -0.61 16 33 H 0.08 -0.23 8.14 -51.93 -0.42 -0.65 16 34 H 0.40 -1.95 8.70 -40.82 -0.36 -2.30 16 35 H 0.10 -0.33 7.66 -51.93 -0.40 -0.73 16 36 H 0.09 -0.29 7.66 -51.93 -0.40 -0.69 16 37 H 0.13 0.48 8.06 -52.49 -0.42 0.06 16 38 H 0.08 -0.08 7.96 -51.93 -0.41 -0.49 16 39 H 0.38 -0.81 8.74 45.56 0.40 -0.41 16 40 H -0.26 -0.33 7.11 56.52 0.40 0.07 16 41 H -0.25 -0.58 7.05 56.52 0.40 -0.18 16 42 H 0.13 -0.13 4.86 -52.48 -0.26 -0.38 16 43 H 0.13 -0.36 8.06 -52.48 -0.42 -0.78 16 44 H 0.13 -0.35 6.30 -52.49 -0.33 -0.68 16 45 H 0.07 -0.02 8.14 -51.93 -0.42 -0.44 16 46 H 0.10 -0.10 6.32 -51.93 -0.33 -0.43 16 47 H 0.12 -0.13 6.67 -52.49 -0.35 -0.48 16 48 H 0.12 -0.12 8.06 -52.48 -0.42 -0.54 16 49 H 0.12 -0.07 8.06 -52.49 -0.42 -0.50 16 LS Contribution 403.87 15.07 6.09 6.09 Total: 0.00 -10.25 403.87 -12.81 -23.06 By element: Atomic # 1 Polarization: -6.22 SS G_CDS: -7.06 Total: -13.28 kcal Atomic # 6 Polarization: 0.76 SS G_CDS: -5.42 Total: -4.66 kcal Atomic # 7 Polarization: 1.19 SS G_CDS: -0.28 Total: 0.91 kcal Atomic # 8 Polarization: -5.49 SS G_CDS: -1.06 Total: -6.55 kcal Atomic # 14 Polarization: -0.49 SS G_CDS: -5.07 Total: -5.56 kcal Total LS contribution 6.09 Total: 6.09 kcal Total: -10.25 -12.81 -23.06 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9650858_4860298.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 0.581 kcal (2) G-P(sol) polarization free energy of solvation -10.245 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -9.664 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.811 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.056 kcal (6) G-S(sol) free energy of system = (1) + (5) -22.475 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.62 seconds