Wall clock time and date at job start Tue Mar 9 2021 12:53:09 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50705 * 1 3 3 C 1.38202 * 120.00167 * 2 1 4 4 C 1.38260 * 120.00093 * 180.02562 * 3 2 1 5 5 C 1.50701 * 119.99960 * 179.97438 * 4 3 2 6 6 H 1.09002 * 112.85178 * 9.66392 * 5 4 3 7 7 C 1.53785 * 113.69000 * 140.93550 * 5 4 3 8 8 C 1.53779 * 87.08093 * 139.98979 * 7 5 4 9 9 H 1.08999 * 113.68761 * 220.00455 * 8 7 5 10 10 N 1.46504 * 113.61484 * 89.11287 * 8 7 5 11 11 C 1.34781 * 119.99665 * 107.49929 * 10 8 7 12 12 O 1.21280 * 119.99730 * 0.02562 * 11 10 8 13 13 C 1.50696 * 119.99783 * 179.97438 * 11 10 8 14 14 O 1.42897 * 109.46960 * 180.02562 * 13 11 10 15 15 C 1.35925 * 116.99969 * 179.97438 * 14 13 11 16 16 C 1.38791 * 120.05690 * 179.72117 * 15 14 13 17 17 Br 1.89097 * 120.03897 * 0.02670 * 16 15 14 18 18 C 1.38238 * 119.92250 * 179.76784 * 16 15 14 19 19 C 1.38246 * 120.05054 * 0.49480 * 18 16 15 20 20 C 1.50697 * 119.94464 * 179.76141 * 19 18 16 21 21 O 1.42895 * 109.47338 * 245.01743 * 20 19 18 22 22 Si 1.86303 * 109.46990 * 5.02159 * 20 19 18 23 23 C 1.38282 * 120.11156 * 359.78140 * 19 18 16 24 24 C 1.38144 * 120.07486 * 359.96073 * 23 19 18 25 25 C 1.53781 * 113.61206 * 238.47086 * 5 4 3 26 26 C 1.38213 * 119.99795 * 0.24748 * 4 3 2 27 27 C 1.38263 * 120.00048 * 359.50143 * 26 4 3 28 28 C 1.38203 * 119.99677 * 0.50085 * 27 26 4 29 29 H 1.09001 * 109.46854 * 89.99878 * 1 2 3 30 30 H 1.08998 * 109.46957 * 209.99888 * 1 2 3 31 31 H 1.08990 * 109.47055 * 330.00251 * 1 2 3 32 32 H 1.08003 * 120.00126 * 359.97438 * 3 2 1 33 33 H 1.09003 * 113.60734 * 254.54099 * 7 5 4 34 34 H 1.08996 * 113.61146 * 25.43597 * 7 5 4 35 35 H 0.96996 * 119.99953 * 287.50554 * 10 8 7 36 36 H 1.09003 * 109.47145 * 300.00264 * 13 11 10 37 37 H 1.09007 * 109.47317 * 60.00401 * 13 11 10 38 38 H 1.08001 * 119.97710 * 180.27358 * 18 16 15 39 39 H 1.09001 * 109.46751 * 125.02170 * 20 19 18 40 40 H 0.96708 * 113.99630 * 60.00566 * 21 20 19 41 41 H 1.48499 * 109.99762 * 58.67946 * 22 20 19 42 42 H 1.48497 * 109.99865 * 179.97438 * 22 20 19 43 43 H 1.07999 * 119.95944 * 179.97438 * 23 19 18 44 44 H 1.07998 * 120.01860 * 179.97438 * 24 23 19 45 45 H 1.09005 * 113.61302 * 334.48043 * 25 5 4 46 46 H 1.08993 * 113.62030 * 105.38889 * 25 5 4 47 47 H 1.08003 * 119.99735 * 179.72539 * 26 4 3 48 48 H 1.08001 * 119.99991 * 180.22797 * 27 26 4 49 49 H 1.08008 * 119.99916 * 179.72988 * 28 27 26 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5071 0.0000 0.0000 3 6 2.1981 1.1968 0.0000 4 6 3.5807 1.1968 -0.0005 5 6 4.3342 2.5019 -0.0011 6 1 3.6884 3.3637 0.1676 7 6 5.5904 2.4905 0.8859 8 6 6.2857 3.2961 -0.2243 9 1 7.3174 2.9938 -0.4041 10 7 6.1347 4.7461 -0.0796 11 6 7.1853 5.4980 0.3046 12 8 8.2557 4.9742 0.5300 13 6 7.0302 6.9896 0.4529 14 8 8.2740 7.5590 0.8660 15 6 8.3063 8.9059 1.0466 16 6 9.4802 9.5248 1.4530 17 35 11.0373 8.4953 1.7557 18 6 9.5113 10.8953 1.6311 19 6 8.3718 11.6475 1.4146 20 6 8.4070 13.1408 1.6146 21 8 7.5487 13.4962 2.7004 22 14 10.1497 13.6748 2.0000 23 6 7.1997 11.0320 1.0151 24 6 7.1646 9.6634 0.8305 25 6 5.2798 2.6667 -1.2026 26 6 4.2717 -0.0002 -0.0062 27 6 3.5804 -1.1975 -0.0010 28 6 2.1984 -1.1974 -0.0005 29 1 -0.3633 0.0000 -1.0277 30 1 -0.3633 -0.8900 0.5138 31 1 -0.3633 0.8899 0.5137 32 1 1.6581 2.1322 -0.0004 33 1 5.4719 3.0434 1.8178 34 1 6.0118 1.4962 1.0332 35 1 5.2787 5.1650 -0.2602 36 1 6.7333 7.4208 -0.5032 37 1 6.2663 7.2029 1.2006 38 1 10.4255 11.3783 1.9431 39 1 8.0674 13.6372 0.7055 40 1 7.7920 13.0896 3.5434 41 1 11.0577 13.2824 0.8924 42 1 10.1979 15.1456 2.1989 43 1 6.3109 11.6220 0.8470 44 1 6.2486 9.1836 0.5189 45 1 5.6165 1.7204 -1.6262 46 1 4.9108 3.3617 -1.9567 47 1 5.3517 -0.0001 -0.0111 48 1 4.1204 -2.1329 -0.0017 49 1 1.6583 -2.1328 -0.0008 There are 68 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 68 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_9650858_6201210.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:53:09 Heat of formation + Delta-G solvation = -14.389764 kcal Electronic energy + Delta-G solvation = -31393.507660 eV Core-core repulsion = 26913.748866 eV Total energy + Delta-G solvation = -4479.758793 eV No. of doubly occupied orbitals = 68 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 432.077 amu Computer time = 0.80 seconds Orbital eigenvalues (eV) -41.82379 -41.36143 -40.38435 -39.32217 -38.66378 -37.20110 -34.84410 -33.51962 -33.33188 -32.18192 -31.90681 -30.46689 -29.49497 -27.76287 -26.68585 -26.48811 -25.93722 -24.07585 -23.05755 -22.59744 -22.08516 -21.76043 -19.89965 -19.49583 -18.61173 -18.10293 -17.70649 -17.49552 -17.25388 -16.83357 -16.49845 -16.33736 -16.08432 -15.95295 -15.67039 -15.59972 -15.33285 -14.92976 -14.77235 -14.71901 -14.40113 -14.29610 -14.06393 -14.03882 -13.92365 -13.68281 -13.45584 -13.43776 -13.02924 -12.80255 -12.67727 -12.40602 -12.27933 -12.17900 -12.14170 -11.88036 -11.85879 -11.69605 -11.64390 -11.19909 -11.17837 -11.02782 -10.45548 -10.17388 -9.99684 -9.66894 -9.43614 -9.31971 -5.03248 -0.03441 0.08281 0.42696 0.49345 0.64030 1.28625 1.37884 1.42477 1.59780 1.93338 2.39784 2.47877 2.79549 3.45513 3.46829 3.49231 3.57349 3.67639 3.70160 3.79294 3.83237 3.94394 4.01062 4.02540 4.06478 4.08496 4.08930 4.20356 4.27213 4.34147 4.45210 4.50026 4.55833 4.63122 4.64680 4.76353 4.76582 4.78777 4.80916 4.84430 4.92411 5.00508 5.03297 5.03609 5.13712 5.20046 5.30213 5.31226 5.44865 5.51284 5.59308 5.71701 5.75470 6.05046 6.14567 6.43298 6.77164 7.12231 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.116 4.116 2 C -0.097 4.097 3 C -0.128 4.128 4 C -0.073 4.073 5 C -0.064 4.064 6 H 0.115 0.885 7 C -0.143 4.143 8 C 0.118 3.882 9 H 0.082 0.918 10 N -0.692 5.692 11 C 0.515 3.485 12 O -0.566 6.566 13 C 0.034 3.966 14 O -0.304 6.304 15 C 0.149 3.851 16 C -0.140 4.140 17 Br -0.049 7.049 18 C -0.054 4.054 19 C -0.152 4.152 20 C -0.053 4.053 21 O -0.550 6.550 22 Si 0.742 3.258 23 C -0.034 4.034 24 C -0.195 4.195 25 C -0.124 4.124 26 C -0.135 4.135 27 C -0.126 4.126 28 C -0.142 4.142 29 H 0.075 0.925 30 H 0.069 0.931 31 H 0.073 0.927 32 H 0.135 0.865 33 H 0.069 0.931 34 H 0.091 0.909 35 H 0.421 0.579 36 H 0.130 0.870 37 H 0.131 0.869 38 H 0.148 0.852 39 H 0.119 0.881 40 H 0.396 0.604 41 H -0.289 1.289 42 H -0.292 1.292 43 H 0.155 0.845 44 H 0.173 0.827 45 H 0.096 0.904 46 H 0.091 0.909 47 H 0.129 0.871 48 H 0.131 0.869 49 H 0.128 0.872 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -8.229 0.843 -0.559 8.291 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.172 4.172 2 C -0.097 4.097 3 C -0.146 4.146 4 C -0.073 4.073 5 C -0.082 4.082 6 H 0.133 0.867 7 C -0.181 4.181 8 C 0.012 3.988 9 H 0.101 0.899 10 N -0.346 5.346 11 C 0.301 3.699 12 O -0.444 6.444 13 C -0.044 4.044 14 O -0.216 6.216 15 C 0.101 3.899 16 C -0.220 4.220 17 Br 0.036 6.964 18 C -0.073 4.073 19 C -0.154 4.154 20 C -0.164 4.164 21 O -0.358 6.358 22 Si 0.649 3.351 23 C -0.052 4.052 24 C -0.214 4.214 25 C -0.162 4.162 26 C -0.153 4.153 27 C -0.144 4.144 28 C -0.160 4.160 29 H 0.094 0.906 30 H 0.088 0.912 31 H 0.092 0.908 32 H 0.153 0.847 33 H 0.088 0.912 34 H 0.110 0.890 35 H 0.260 0.740 36 H 0.147 0.853 37 H 0.149 0.851 38 H 0.165 0.835 39 H 0.136 0.864 40 H 0.246 0.754 41 H -0.216 1.216 42 H -0.220 1.220 43 H 0.173 0.827 44 H 0.190 0.810 45 H 0.114 0.886 46 H 0.110 0.890 47 H 0.147 0.853 48 H 0.149 0.851 49 H 0.146 0.854 Dipole moment (debyes) X Y Z Total from point charges -6.328 0.756 -0.962 6.446 hybrid contribution -0.794 -0.059 -0.567 0.978 sum -7.122 0.697 -1.530 7.318 Atomic orbital electron populations 1.20835 0.90111 1.03399 1.02863 1.20235 0.97129 0.93335 0.99022 1.21184 0.93783 0.98143 1.01455 1.19854 0.93557 0.94912 0.98978 1.21601 0.94638 0.95103 0.96841 0.86681 1.23540 0.95849 1.01001 0.97742 1.21819 0.99974 0.79509 0.97492 0.89947 1.45322 1.13596 1.06804 1.68880 1.20507 0.83941 0.89143 0.76310 1.90791 1.28642 1.74796 1.50176 1.22826 0.86353 0.90170 1.05009 1.86244 1.34890 1.18116 1.82397 1.18808 0.93614 0.82762 0.94669 1.21143 0.92377 0.94718 1.13782 1.96777 1.32663 1.71613 1.95335 1.20912 0.98938 0.90489 0.96938 1.20302 0.93868 0.96622 1.04566 1.24828 1.06377 0.91952 0.93257 1.86478 1.55760 1.73245 1.20355 0.94017 0.74384 0.78993 0.87688 1.21218 0.97943 0.93718 0.92335 1.21604 0.97863 0.94939 1.06962 1.23361 0.94621 1.01914 0.96255 1.21189 1.00455 0.92194 1.01416 1.21378 0.94588 0.98762 0.99662 1.21301 0.94682 0.98252 1.01748 0.90645 0.91237 0.90765 0.84683 0.91203 0.89027 0.74046 0.85264 0.85116 0.83510 0.86417 0.75412 1.21603 1.21986 0.82688 0.80959 0.88567 0.89002 0.85298 0.85123 0.85418 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.12 0.33 10.01 71.24 0.71 1.04 16 2 C -0.10 -0.08 5.88 -19.86 -0.12 -0.20 16 3 C -0.13 0.06 9.36 22.27 0.21 0.27 16 4 C -0.07 0.07 5.29 -19.86 -0.11 -0.04 16 5 C -0.06 0.35 3.85 -11.01 -0.04 0.30 16 6 H 0.12 -1.04 8.09 -2.39 -0.02 -1.06 16 7 C -0.14 0.40 7.26 31.12 0.23 0.62 16 8 C 0.12 -0.30 4.32 45.52 0.20 -0.11 16 9 H 0.08 0.25 7.46 -2.39 -0.02 0.23 16 10 N -0.69 3.83 5.26 -440.02 -2.32 1.51 16 11 C 0.51 0.66 7.91 87.66 0.69 1.35 16 12 O -0.57 -7.64 16.10 16.01 0.26 -7.38 16 13 C 0.03 -0.18 5.22 71.23 0.37 0.19 16 14 O -0.30 -1.27 9.01 -73.67 -0.66 -1.93 16 15 C 0.15 0.27 6.68 22.52 0.15 0.42 16 16 C -0.14 -0.58 6.24 22.40 0.14 -0.44 16 17 Br -0.05 -0.38 33.16 -20.37 -0.68 -1.06 16 18 C -0.05 -0.02 8.40 22.27 0.19 0.17 16 19 C -0.15 0.35 5.35 -19.85 -0.11 0.24 16 20 C -0.05 0.16 2.80 71.24 0.20 0.36 16 21 O -0.55 1.58 12.83 -148.98 -1.91 -0.33 16 22 Si 0.74 -1.32 29.80 68.60 2.04 0.72 16 23 C -0.03 0.15 9.68 22.26 0.22 0.37 16 24 C -0.19 0.94 9.04 22.36 0.20 1.14 16 25 C -0.12 0.74 7.29 31.12 0.23 0.96 16 26 C -0.13 -0.06 8.53 22.27 0.19 0.13 16 27 C -0.13 -0.17 10.05 22.27 0.22 0.05 16 28 C -0.14 -0.24 9.70 22.27 0.22 -0.02 16 29 H 0.07 -0.28 8.14 -2.39 -0.02 -0.30 16 30 H 0.07 -0.24 8.09 -2.39 -0.02 -0.25 16 31 H 0.07 -0.33 8.08 -2.39 -0.02 -0.35 16 32 H 0.14 -0.59 8.05 -2.91 -0.02 -0.61 16 33 H 0.07 -0.10 8.14 -2.39 -0.02 -0.12 16 34 H 0.09 -0.16 6.41 -2.39 -0.02 -0.17 16 35 H 0.42 -5.61 8.70 -92.71 -0.81 -6.42 16 36 H 0.13 -1.54 7.66 -2.39 -0.02 -1.56 16 37 H 0.13 -1.59 7.66 -2.38 -0.02 -1.61 16 38 H 0.15 -0.28 4.90 -2.91 -0.01 -0.30 16 39 H 0.12 -0.37 7.96 -2.39 -0.02 -0.39 16 40 H 0.40 -4.03 8.70 -74.05 -0.64 -4.67 16 41 H -0.29 -1.18 7.11 99.48 0.71 -0.47 16 42 H -0.29 -1.53 7.11 99.48 0.71 -0.83 16 43 H 0.16 -1.24 8.06 -2.91 -0.02 -1.26 16 44 H 0.17 -2.13 6.30 -2.91 -0.02 -2.15 16 45 H 0.10 -0.46 7.62 -2.38 -0.02 -0.47 16 46 H 0.09 -0.77 8.14 -2.39 -0.02 -0.79 16 47 H 0.13 -0.24 6.73 -2.91 -0.02 -0.26 16 48 H 0.13 -0.19 8.06 -2.91 -0.02 -0.22 16 49 H 0.13 -0.12 8.06 -2.91 -0.02 -0.14 16 Total: 0.00 -26.15 424.26 0.32 -25.83 By element: Atomic # 1 Polarization: -23.77 SS G_CDS: -0.41 Total: -24.17 kcal Atomic # 6 Polarization: 2.82 SS G_CDS: 3.99 Total: 6.81 kcal Atomic # 7 Polarization: 3.83 SS G_CDS: -2.32 Total: 1.51 kcal Atomic # 8 Polarization: -7.32 SS G_CDS: -2.32 Total: -9.64 kcal Atomic # 14 Polarization: -1.32 SS G_CDS: 2.04 Total: 0.72 kcal Atomic # 35 Polarization: -0.38 SS G_CDS: -0.68 Total: -1.06 kcal Total: -26.15 0.32 -25.83 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9650858_6201210.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 11.441 kcal (2) G-P(sol) polarization free energy of solvation -26.149 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -14.709 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.319 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -25.830 kcal (6) G-S(sol) free energy of system = (1) + (5) -14.390 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.80 seconds