Wall clock time and date at job start Tue Mar 9 2021 12:53:48 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42901 * 1 3 3 Si 1.86297 * 109.46983 * 2 1 4 4 C 1.50695 * 109.46807 * 120.00130 * 2 1 3 5 5 C 1.35456 * 126.06753 * 244.96802 * 4 2 1 6 6 N 1.35531 * 108.87244 * 180.02562 * 5 4 2 7 7 C 1.37645 * 108.64621 * 0.02562 * 6 5 4 8 8 C 1.46679 * 126.23836 * 179.97438 * 7 6 5 9 9 O 1.21693 * 120.00434 * 180.02562 * 8 7 6 10 10 N 1.34777 * 119.99308 * 0.29846 * 8 7 6 11 11 C 1.46505 * 119.99724 * 179.72494 * 10 8 7 12 12 H 1.08995 * 112.85298 * 25.33164 * 11 10 8 13 13 C 1.53780 * 113.61139 * 156.53400 * 11 10 8 14 14 C 1.53783 * 87.08414 * 89.11757 * 13 11 10 15 15 H 1.08999 * 113.60713 * 270.88346 * 14 13 11 16 16 C 1.50694 * 113.61627 * 140.06521 * 14 13 11 17 17 C 1.38226 * 119.97114 * 299.71841 * 16 14 13 18 18 C 1.38230 * 120.04777 * 179.76537 * 17 16 14 19 19 C 1.38411 * 119.98044 * 0.51793 * 18 17 16 20 20 F 1.35103 * 120.03059 * 179.76785 * 19 18 17 21 21 C 1.38562 * 119.94115 * 359.73594 * 19 18 17 22 22 Br 1.89110 * 120.02103 * 180.02562 * 21 19 18 23 23 C 1.38254 * 119.95886 * 0.02562 * 21 19 18 24 24 C 1.53791 * 113.61264 * 254.13682 * 11 10 8 25 25 C 1.37875 * 107.53493 * 0.26074 * 7 6 5 26 26 H 0.96702 * 114.00053 * 59.99697 * 1 2 3 27 27 H 1.09005 * 109.46569 * 239.99953 * 2 1 3 28 28 H 1.48496 * 110.00236 * 60.00176 * 3 2 1 29 29 H 1.48498 * 109.99751 * 181.32106 * 3 2 1 30 30 H 1.08004 * 125.55903 * 0.02562 * 5 4 2 31 31 H 0.97001 * 125.67254 * 180.02562 * 6 5 4 32 32 H 0.97000 * 120.00483 * 359.72926 * 10 8 7 33 33 H 1.09008 * 113.60917 * 203.66305 * 13 11 10 34 34 H 1.08991 * 113.61449 * 334.47926 * 13 11 10 35 35 H 1.08010 * 119.97533 * 0.02636 * 17 16 14 36 36 H 1.08000 * 120.01140 * 180.23226 * 18 17 16 37 37 H 1.07996 * 119.99491 * 179.97438 * 23 21 19 38 38 H 1.08997 * 113.60978 * 25.43765 * 24 11 10 39 39 H 1.08996 * 113.60774 * 156.33716 * 24 11 10 40 40 H 1.08002 * 126.46223 * 179.73619 * 25 7 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9312 -0.7104 1.2304 5 6 2.6338 -0.1500 2.2439 6 7 2.9060 -1.1032 3.1682 7 6 2.3695 -2.2966 2.7408 8 6 2.4383 -3.5804 3.4468 9 8 1.9218 -4.5699 2.9621 10 7 3.0689 -3.6629 4.6351 11 6 3.1325 -4.9439 5.3432 12 1 3.0510 -5.8013 4.6752 13 6 4.3055 -5.0431 6.3327 14 6 3.3619 -4.4451 7.3896 15 1 3.3773 -3.3557 7.4221 16 6 3.5055 -5.0734 8.7518 17 6 3.2695 -6.4253 8.9171 18 6 3.4055 -7.0042 10.1649 19 6 3.7679 -6.2276 11.2518 20 9 3.8966 -6.7915 12.4728 21 6 3.9993 -4.8715 11.0865 22 35 4.4953 -3.8085 12.5698 23 6 3.8673 -4.2960 9.8364 24 6 2.1975 -5.0212 6.5618 25 6 1.7612 -2.0668 1.5251 26 1 -0.3933 0.4417 -0.7650 27 1 1.7923 -0.5139 -0.8900 28 1 1.5615 2.4679 1.2085 29 1 3.5345 1.7702 -0.0322 30 1 2.9289 0.8871 2.3053 31 1 3.3971 -0.9669 3.9935 32 1 3.4807 -2.8742 5.0215 33 1 4.6093 -6.0676 6.5484 34 1 5.1458 -4.3968 6.0800 35 1 2.9826 -7.0306 8.0697 36 1 3.2245 -8.0612 10.2927 37 1 4.0471 -3.2390 9.7069 38 1 1.3367 -4.3561 6.4944 39 1 1.9261 -6.0396 6.8398 40 1 1.2474 -2.7962 0.9164 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_9650940_10543058.mol2 40 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:53:48 Heat of formation + Delta-G solvation = -2.369717 kcal Electronic energy + Delta-G solvation = -26758.670445 eV Core-core repulsion = 22502.536564 eV Total energy + Delta-G solvation = -4256.133881 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 395.032 amu Computer time = 0.97 seconds Orbital eigenvalues (eV) -50.03071 -42.58146 -41.64115 -40.16370 -38.76601 -37.60489 -34.82627 -33.51624 -32.75940 -31.98027 -30.77977 -30.25717 -26.98687 -26.92791 -26.10071 -24.43517 -24.12269 -22.71761 -21.34516 -20.79248 -20.45742 -19.69902 -18.94237 -18.30354 -17.80695 -17.54568 -17.09522 -16.82630 -16.79823 -16.30293 -15.78117 -15.70522 -15.40989 -15.11911 -14.91132 -14.84664 -14.78957 -14.43561 -14.36621 -14.24836 -14.07970 -13.91862 -13.67128 -13.38855 -13.37910 -12.56113 -12.48564 -12.26052 -12.20939 -11.96083 -11.75115 -11.59103 -11.33410 -11.21723 -10.31362 -10.30377 -10.14099 -9.95733 -9.69305 -9.37169 -5.02652 -0.29451 -0.12553 0.33061 0.40455 1.28284 1.41896 1.65228 1.82169 1.89704 1.95768 2.15018 2.29489 2.94426 3.15613 3.28580 3.41745 3.49615 3.52321 3.63589 3.72557 3.79194 3.81201 3.84382 3.98191 4.03699 4.22877 4.32528 4.37044 4.47044 4.54892 4.62600 4.64334 4.67875 4.68964 4.78010 4.82531 4.88374 4.89648 4.99877 5.16751 5.36151 5.49054 5.53347 5.72948 6.11186 6.31658 6.72850 7.03757 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.547 6.547 2 C -0.037 4.037 3 Si 0.686 3.314 4 C -0.164 4.164 5 C 0.030 3.970 6 N -0.535 5.535 7 C -0.058 4.058 8 C 0.595 3.405 9 O -0.519 6.519 10 N -0.716 5.716 11 C 0.121 3.879 12 H 0.110 0.890 13 C -0.135 4.135 14 C -0.073 4.073 15 H 0.100 0.900 16 C -0.076 4.076 17 C -0.072 4.072 18 C -0.142 4.142 19 C 0.124 3.876 20 F -0.123 7.123 21 C -0.129 4.129 22 Br -0.027 7.027 23 C -0.060 4.060 24 C -0.144 4.144 25 C -0.070 4.070 26 H 0.380 0.620 27 H 0.072 0.928 28 H -0.254 1.254 29 H -0.257 1.257 30 H 0.168 0.832 31 H 0.418 0.582 32 H 0.394 0.606 33 H 0.102 0.898 34 H 0.079 0.921 35 H 0.142 0.858 36 H 0.147 0.853 37 H 0.141 0.859 38 H 0.078 0.922 39 H 0.099 0.901 40 H 0.153 0.847 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.849 3.802 -3.402 5.427 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.353 6.353 2 C -0.148 4.148 3 Si 0.587 3.413 4 C -0.171 4.171 5 C -0.107 4.107 6 N -0.131 5.131 7 C -0.171 4.171 8 C 0.383 3.617 9 O -0.394 6.394 10 N -0.368 5.368 11 C 0.016 3.984 12 H 0.128 0.872 13 C -0.173 4.173 14 C -0.092 4.092 15 H 0.118 0.882 16 C -0.078 4.078 17 C -0.091 4.091 18 C -0.162 4.162 19 C 0.102 3.898 20 F -0.101 7.101 21 C -0.210 4.210 22 Br 0.059 6.941 23 C -0.079 4.079 24 C -0.183 4.183 25 C -0.096 4.096 26 H 0.227 0.773 27 H 0.090 0.910 28 H -0.178 1.178 29 H -0.181 1.181 30 H 0.185 0.815 31 H 0.256 0.744 32 H 0.228 0.772 33 H 0.121 0.879 34 H 0.097 0.903 35 H 0.160 0.840 36 H 0.165 0.835 37 H 0.159 0.841 38 H 0.097 0.903 39 H 0.117 0.883 40 H 0.171 0.829 Dipole moment (debyes) X Y Z Total from point charges 2.325 3.695 -2.001 4.802 hybrid contribution 0.470 -0.247 0.867 1.017 sum 2.795 3.448 -1.133 4.581 Atomic orbital electron populations 1.86519 1.17578 1.81751 1.49441 1.23978 0.85268 1.09304 0.96282 0.95055 0.80619 0.77945 0.87712 1.18812 1.06355 0.94345 0.97591 1.21696 1.03975 0.94259 0.90769 1.41848 1.44007 1.07828 1.19400 1.20376 1.11093 0.85974 0.99616 1.16985 0.78016 0.86650 0.80015 1.90883 1.45778 1.36028 1.66688 1.45540 1.58155 1.11840 1.21221 1.21856 0.96390 0.87063 0.93069 0.87167 1.23449 0.96643 1.03059 0.94140 1.21661 0.97800 0.99961 0.89739 0.88191 1.19729 0.99657 0.93608 0.94765 1.21054 0.96711 0.94427 0.96873 1.21203 1.02322 1.01102 0.91563 1.17439 1.00903 0.90012 0.81408 1.91583 1.93018 1.84858 1.40673 1.21998 1.10242 0.93373 0.95358 1.96832 1.90884 1.67487 1.38886 1.20925 0.96902 1.00568 0.89541 1.23647 0.97120 1.02736 0.94748 1.21227 0.98885 0.95526 0.94007 0.77289 0.91039 1.17815 1.18149 0.81547 0.74437 0.77185 0.87942 0.90269 0.84019 0.83504 0.84118 0.90312 0.88294 0.82895 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 28. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 -0.31 12.86 -35.23 -0.45 -0.77 16 2 C -0.04 0.00 3.01 36.00 0.11 0.11 16 3 Si 0.69 -1.33 30.60 -169.99 -5.20 -6.53 16 4 C -0.16 -0.32 5.46 -105.02 -0.57 -0.89 16 5 C 0.03 0.01 10.45 -16.91 -0.18 -0.17 16 6 N -0.53 0.64 5.99 -9.39 -0.06 0.59 16 7 C -0.06 -0.10 7.06 -81.98 -0.58 -0.68 16 8 C 0.60 1.26 7.79 -12.85 -0.10 1.16 16 9 O -0.52 -3.13 16.50 5.20 0.09 -3.04 16 10 N -0.72 1.19 5.26 -54.32 -0.29 0.91 16 11 C 0.12 -0.24 4.30 -67.11 -0.29 -0.53 16 12 H 0.11 -0.04 7.50 -51.93 -0.39 -0.43 16 13 C -0.13 0.51 7.29 -25.92 -0.19 0.32 16 14 C -0.07 0.26 3.87 -90.82 -0.35 -0.09 16 15 H 0.10 -0.45 8.09 -51.93 -0.42 -0.87 16 16 C -0.08 0.16 5.29 -104.62 -0.55 -0.40 16 17 C -0.07 0.16 8.62 -39.59 -0.34 -0.18 16 18 C -0.14 0.12 10.03 -39.52 -0.40 -0.28 16 19 C 0.12 0.16 7.27 -39.40 -0.29 -0.12 16 20 F -0.12 -0.36 16.73 2.25 0.04 -0.32 16 21 C -0.13 -0.13 6.23 -39.46 -0.25 -0.37 16 22 Br -0.03 -0.04 33.29 -68.01 -2.26 -2.31 16 23 C -0.06 0.06 9.45 -39.57 -0.37 -0.32 16 24 C -0.14 0.37 7.27 -25.77 -0.19 0.18 16 25 C -0.07 -0.22 10.59 -39.12 -0.41 -0.63 16 26 H 0.38 -1.73 8.74 45.56 0.40 -1.33 16 27 H 0.07 -0.10 7.96 -51.93 -0.41 -0.51 16 28 H -0.25 -0.22 7.11 56.52 0.40 0.18 16 29 H -0.26 -0.07 7.11 56.52 0.40 0.33 16 30 H 0.17 -0.27 6.21 -52.48 -0.33 -0.60 16 31 H 0.42 -2.05 8.19 -40.82 -0.33 -2.38 16 32 H 0.39 -1.78 7.83 -40.82 -0.32 -2.10 16 33 H 0.10 -0.42 7.73 -51.92 -0.40 -0.82 16 34 H 0.08 -0.33 8.14 -51.93 -0.42 -0.75 16 35 H 0.14 -0.60 6.65 -52.48 -0.35 -0.95 16 36 H 0.15 -0.37 8.06 -52.49 -0.42 -0.79 16 37 H 0.14 -0.35 8.05 -52.49 -0.42 -0.77 16 38 H 0.08 -0.11 8.14 -51.93 -0.42 -0.53 16 39 H 0.10 -0.32 6.31 -51.93 -0.33 -0.65 16 40 H 0.15 0.52 8.06 -52.49 -0.42 0.10 16 LS Contribution 365.07 15.07 5.50 5.50 Total: 0.00 -9.93 365.07 -11.78 -21.71 By element: Atomic # 1 Polarization: -8.66 SS G_CDS: -4.19 Total: -12.86 kcal Atomic # 6 Polarization: 2.07 SS G_CDS: -4.95 Total: -2.88 kcal Atomic # 7 Polarization: 1.84 SS G_CDS: -0.34 Total: 1.50 kcal Atomic # 8 Polarization: -3.44 SS G_CDS: -0.37 Total: -3.81 kcal Atomic # 9 Polarization: -0.36 SS G_CDS: 0.04 Total: -0.32 kcal Atomic # 14 Polarization: -1.33 SS G_CDS: -5.20 Total: -6.53 kcal Atomic # 35 Polarization: -0.04 SS G_CDS: -2.26 Total: -2.31 kcal Total LS contribution 5.50 Total: 5.50 kcal Total: -9.93 -11.78 -21.71 kcal The number of atoms in the molecule is 40 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9650940_10543058.mol2 40 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 19.335 kcal (2) G-P(sol) polarization free energy of solvation -9.928 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 9.407 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.777 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.705 kcal (6) G-S(sol) free energy of system = (1) + (5) -2.370 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.97 seconds