Wall clock time and date at job start Tue Mar 9 2021 12:53:47 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42901 * 1 3 3 Si 1.86297 * 109.46983 * 2 1 4 4 C 1.50695 * 109.46807 * 120.00130 * 2 1 3 5 5 C 1.35456 * 126.06753 * 244.96802 * 4 2 1 6 6 N 1.35531 * 108.87244 * 180.02562 * 5 4 2 7 7 C 1.37645 * 108.64621 * 0.02562 * 6 5 4 8 8 C 1.46679 * 126.23836 * 179.97438 * 7 6 5 9 9 O 1.21693 * 120.00434 * 180.02562 * 8 7 6 10 10 N 1.34777 * 119.99308 * 0.29846 * 8 7 6 11 11 C 1.46505 * 119.99724 * 179.72494 * 10 8 7 12 12 H 1.08995 * 112.85298 * 25.33164 * 11 10 8 13 13 C 1.53780 * 113.61139 * 156.53400 * 11 10 8 14 14 C 1.53783 * 87.08414 * 89.11757 * 13 11 10 15 15 H 1.08999 * 113.60713 * 270.88346 * 14 13 11 16 16 C 1.50694 * 113.61627 * 140.06521 * 14 13 11 17 17 C 1.38226 * 119.97114 * 299.71841 * 16 14 13 18 18 C 1.38230 * 120.04777 * 179.76537 * 17 16 14 19 19 C 1.38411 * 119.98044 * 0.51793 * 18 17 16 20 20 F 1.35103 * 120.03059 * 179.76785 * 19 18 17 21 21 C 1.38562 * 119.94115 * 359.73594 * 19 18 17 22 22 Br 1.89110 * 120.02103 * 180.02562 * 21 19 18 23 23 C 1.38254 * 119.95886 * 0.02562 * 21 19 18 24 24 C 1.53791 * 113.61264 * 254.13682 * 11 10 8 25 25 C 1.37875 * 107.53493 * 0.26074 * 7 6 5 26 26 H 0.96702 * 114.00053 * 59.99697 * 1 2 3 27 27 H 1.09005 * 109.46569 * 239.99953 * 2 1 3 28 28 H 1.48496 * 110.00236 * 60.00176 * 3 2 1 29 29 H 1.48498 * 109.99751 * 181.32106 * 3 2 1 30 30 H 1.08004 * 125.55903 * 0.02562 * 5 4 2 31 31 H 0.97001 * 125.67254 * 180.02562 * 6 5 4 32 32 H 0.97000 * 120.00483 * 359.72926 * 10 8 7 33 33 H 1.09008 * 113.60917 * 203.66305 * 13 11 10 34 34 H 1.08991 * 113.61449 * 334.47926 * 13 11 10 35 35 H 1.08010 * 119.97533 * 0.02636 * 17 16 14 36 36 H 1.08000 * 120.01140 * 180.23226 * 18 17 16 37 37 H 1.07996 * 119.99491 * 179.97438 * 23 21 19 38 38 H 1.08997 * 113.60978 * 25.43765 * 24 11 10 39 39 H 1.08996 * 113.60774 * 156.33716 * 24 11 10 40 40 H 1.08002 * 126.46223 * 179.73619 * 25 7 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9312 -0.7104 1.2304 5 6 2.6338 -0.1500 2.2439 6 7 2.9060 -1.1032 3.1682 7 6 2.3695 -2.2966 2.7408 8 6 2.4383 -3.5804 3.4468 9 8 1.9218 -4.5699 2.9621 10 7 3.0689 -3.6629 4.6351 11 6 3.1325 -4.9439 5.3432 12 1 3.0510 -5.8013 4.6752 13 6 4.3055 -5.0431 6.3327 14 6 3.3619 -4.4451 7.3896 15 1 3.3773 -3.3557 7.4221 16 6 3.5055 -5.0734 8.7518 17 6 3.2695 -6.4253 8.9171 18 6 3.4055 -7.0042 10.1649 19 6 3.7679 -6.2276 11.2518 20 9 3.8966 -6.7915 12.4728 21 6 3.9993 -4.8715 11.0865 22 35 4.4953 -3.8085 12.5698 23 6 3.8673 -4.2960 9.8364 24 6 2.1975 -5.0212 6.5618 25 6 1.7612 -2.0668 1.5251 26 1 -0.3933 0.4417 -0.7650 27 1 1.7923 -0.5139 -0.8900 28 1 1.5615 2.4679 1.2085 29 1 3.5345 1.7702 -0.0322 30 1 2.9289 0.8871 2.3053 31 1 3.3971 -0.9669 3.9935 32 1 3.4807 -2.8742 5.0215 33 1 4.6093 -6.0676 6.5484 34 1 5.1458 -4.3968 6.0800 35 1 2.9826 -7.0306 8.0697 36 1 3.2245 -8.0612 10.2927 37 1 4.0471 -3.2390 9.7069 38 1 1.3367 -4.3561 6.4944 39 1 1.9261 -6.0396 6.8398 40 1 1.2474 -2.7962 0.9164 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_9650940_10543058.mol2 40 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:53:47 Heat of formation + Delta-G solvation = -2.069973 kcal Electronic energy + Delta-G solvation = -26758.657447 eV Core-core repulsion = 22502.536564 eV Total energy + Delta-G solvation = -4256.120883 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 395.032 amu Computer time = 0.53 seconds Orbital eigenvalues (eV) -50.11536 -42.62251 -41.52156 -40.20142 -38.75405 -37.57247 -34.86185 -33.47936 -32.76852 -31.92254 -30.83038 -30.23168 -26.88577 -26.74914 -26.02084 -24.41941 -24.07273 -22.64621 -21.42022 -20.81217 -20.36616 -19.65790 -18.91213 -18.26590 -17.75353 -17.55258 -17.02213 -16.89118 -16.75380 -16.37580 -15.77758 -15.60012 -15.34225 -15.10486 -14.90736 -14.83601 -14.71887 -14.45465 -14.35381 -14.20708 -14.10589 -13.79003 -13.48544 -13.42705 -13.31484 -12.47453 -12.42742 -12.17438 -12.09539 -11.93713 -11.64339 -11.51688 -11.39443 -11.28113 -10.31546 -10.27808 -10.07013 -9.97634 -9.64405 -9.42981 -4.86154 -0.23295 -0.02734 0.22555 0.39723 1.32207 1.43937 1.77304 1.81000 1.97996 2.05481 2.15633 2.25913 2.99138 3.35889 3.43943 3.58652 3.63360 3.65266 3.72510 3.86665 3.89518 3.98752 4.04047 4.05514 4.11520 4.22075 4.46383 4.55038 4.62377 4.72548 4.74325 4.76742 4.80985 4.82158 4.86123 4.89624 4.97450 5.04253 5.07603 5.28475 5.45022 5.52068 5.60384 5.61587 6.21407 6.39503 6.97632 7.01993 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.571 6.571 2 C -0.057 4.057 3 Si 0.785 3.215 4 C -0.189 4.189 5 C 0.033 3.967 6 N -0.514 5.514 7 C -0.063 4.063 8 C 0.594 3.406 9 O -0.567 6.567 10 N -0.697 5.697 11 C 0.112 3.888 12 H 0.091 0.909 13 C -0.122 4.122 14 C -0.064 4.064 15 H 0.116 0.884 16 C -0.070 4.070 17 C -0.069 4.069 18 C -0.144 4.144 19 C 0.096 3.904 20 F -0.140 7.140 21 C -0.143 4.143 22 Br -0.042 7.042 23 C -0.062 4.062 24 C -0.143 4.143 25 C -0.102 4.102 26 H 0.399 0.601 27 H 0.078 0.922 28 H -0.289 1.289 29 H -0.283 1.283 30 H 0.188 0.812 31 H 0.437 0.563 32 H 0.411 0.589 33 H 0.110 0.890 34 H 0.090 0.910 35 H 0.165 0.835 36 H 0.160 0.840 37 H 0.156 0.844 38 H 0.067 0.933 39 H 0.106 0.894 40 H 0.135 0.865 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.598 4.934 -3.730 6.708 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.381 6.381 2 C -0.166 4.166 3 Si 0.688 3.312 4 C -0.196 4.196 5 C -0.104 4.104 6 N -0.112 5.112 7 C -0.176 4.176 8 C 0.383 3.617 9 O -0.446 6.446 10 N -0.348 5.348 11 C 0.007 3.993 12 H 0.110 0.890 13 C -0.160 4.160 14 C -0.082 4.082 15 H 0.134 0.866 16 C -0.072 4.072 17 C -0.087 4.087 18 C -0.163 4.163 19 C 0.075 3.925 20 F -0.118 7.118 21 C -0.223 4.223 22 Br 0.043 6.957 23 C -0.081 4.081 24 C -0.181 4.181 25 C -0.129 4.129 26 H 0.250 0.750 27 H 0.096 0.904 28 H -0.216 1.216 29 H -0.209 1.209 30 H 0.205 0.795 31 H 0.278 0.722 32 H 0.248 0.752 33 H 0.128 0.872 34 H 0.109 0.891 35 H 0.183 0.817 36 H 0.178 0.822 37 H 0.174 0.826 38 H 0.086 0.914 39 H 0.125 0.875 40 H 0.153 0.847 Dipole moment (debyes) X Y Z Total from point charges 3.092 4.834 -2.299 6.182 hybrid contribution 0.207 -0.633 0.935 1.148 sum 3.299 4.201 -1.364 5.513 Atomic orbital electron populations 1.86463 1.18143 1.82474 1.50994 1.24379 0.85093 1.11334 0.95827 0.93815 0.77467 0.74377 0.85492 1.19233 1.07131 0.94125 0.99092 1.22009 1.03057 0.95082 0.90289 1.41764 1.43105 1.06529 1.19803 1.20254 1.11303 0.86665 0.99383 1.17083 0.77799 0.86124 0.80724 1.90854 1.48121 1.37511 1.68117 1.45388 1.56695 1.12840 1.19910 1.21945 0.98149 0.86167 0.93015 0.89042 1.23411 0.96160 1.03821 0.92593 1.21671 0.97138 1.00786 0.88635 0.86624 1.19904 0.98594 0.93620 0.95036 1.21358 0.95611 0.94712 0.96999 1.21433 1.01727 1.01731 0.91414 1.17777 1.02677 0.90603 0.81473 1.91533 1.93397 1.85131 1.41761 1.22118 1.11317 0.93259 0.95639 1.96800 1.91079 1.67715 1.40060 1.21139 0.96553 1.01458 0.88994 1.23657 0.96897 1.03114 0.94472 1.21292 1.00274 0.96243 0.95079 0.75014 0.90389 1.21562 1.20912 0.79511 0.72179 0.75240 0.87203 0.89111 0.81745 0.82192 0.82642 0.91429 0.87546 0.84672 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.57 -0.98 12.86 -148.98 -1.92 -2.90 16 2 C -0.06 -0.01 3.01 71.23 0.21 0.21 16 3 Si 0.78 -3.65 30.60 68.60 2.10 -1.55 16 4 C -0.19 -0.86 5.46 -20.12 -0.11 -0.97 16 5 C 0.03 -0.01 10.45 83.48 0.87 0.87 16 6 N -0.51 1.60 5.99 -183.62 -1.10 0.50 16 7 C -0.06 -0.26 7.06 40.35 0.28 0.03 16 8 C 0.59 3.04 7.79 86.45 0.67 3.72 16 9 O -0.57 -8.05 16.50 -4.33 -0.07 -8.12 16 10 N -0.70 2.72 5.26 -443.98 -2.34 0.38 16 11 C 0.11 -0.52 4.30 45.52 0.20 -0.33 16 12 H 0.09 -0.01 7.50 -2.39 -0.02 -0.03 16 13 C -0.12 1.18 7.29 31.12 0.23 1.40 16 14 C -0.06 0.59 3.87 -10.92 -0.04 0.55 16 15 H 0.12 -1.37 8.09 -2.39 -0.02 -1.39 16 16 C -0.07 0.40 5.29 -19.86 -0.11 0.30 16 17 C -0.07 0.40 8.62 22.26 0.19 0.59 16 18 C -0.14 0.31 10.03 22.31 0.22 0.53 16 19 C 0.10 0.30 7.27 22.39 0.16 0.46 16 20 F -0.14 -0.99 16.73 44.97 0.75 -0.24 16 21 C -0.14 -0.30 6.23 22.35 0.14 -0.16 16 22 Br -0.04 -0.16 33.29 -20.37 -0.68 -0.84 16 23 C -0.06 0.18 9.45 22.28 0.21 0.39 16 24 C -0.14 0.89 7.27 31.22 0.23 1.12 16 25 C -0.10 -0.83 10.59 22.57 0.24 -0.59 16 26 H 0.40 -3.60 8.74 -74.06 -0.65 -4.25 16 27 H 0.08 -0.16 7.96 -2.38 -0.02 -0.18 16 28 H -0.29 -0.33 7.11 99.48 0.71 0.37 16 29 H -0.28 0.12 7.11 99.48 0.71 0.83 16 30 H 0.19 -0.88 6.21 -2.91 -0.02 -0.89 16 31 H 0.44 -5.05 8.19 -92.71 -0.76 -5.81 16 32 H 0.41 -4.41 7.83 -92.71 -0.73 -5.14 16 33 H 0.11 -1.15 7.73 -2.38 -0.02 -1.17 16 34 H 0.09 -1.01 8.14 -2.39 -0.02 -1.03 16 35 H 0.17 -1.75 6.65 -2.91 -0.02 -1.77 16 36 H 0.16 -0.89 8.06 -2.91 -0.02 -0.91 16 37 H 0.16 -1.00 8.05 -2.91 -0.02 -1.03 16 38 H 0.07 -0.22 8.14 -2.39 -0.02 -0.24 16 39 H 0.11 -0.82 6.31 -2.39 -0.02 -0.84 16 40 H 0.14 1.42 8.06 -2.91 -0.02 1.39 16 Total: 0.00 -26.15 365.07 -0.60 -26.75 By element: Atomic # 1 Polarization: -21.14 SS G_CDS: -0.96 Total: -22.09 kcal Atomic # 6 Polarization: 4.51 SS G_CDS: 3.60 Total: 8.12 kcal Atomic # 7 Polarization: 4.32 SS G_CDS: -3.44 Total: 0.88 kcal Atomic # 8 Polarization: -9.03 SS G_CDS: -1.99 Total: -11.02 kcal Atomic # 9 Polarization: -0.99 SS G_CDS: 0.75 Total: -0.24 kcal Atomic # 14 Polarization: -3.65 SS G_CDS: 2.10 Total: -1.55 kcal Atomic # 35 Polarization: -0.16 SS G_CDS: -0.68 Total: -0.84 kcal Total: -26.15 -0.60 -26.75 kcal The number of atoms in the molecule is 40 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9650940_10543058.mol2 40 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 24.675 kcal (2) G-P(sol) polarization free energy of solvation -26.145 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -1.470 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.600 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -26.745 kcal (6) G-S(sol) free energy of system = (1) + (5) -2.070 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.53 seconds