Wall clock time and date at job start Tue Mar 9 2021 12:53:59 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42908 * 1 3 3 Si 1.86293 * 109.46988 * 2 1 4 4 C 1.50693 * 109.47147 * 120.00429 * 2 1 3 5 5 C 1.36447 * 120.29797 * 119.97884 * 4 2 1 6 6 C 1.40092 * 119.25466 * 179.76707 * 5 4 2 7 7 C 1.40858 * 132.86161 * 179.65071 * 6 5 4 8 8 C 1.46566 * 126.57980 * 0.65111 * 7 6 5 9 9 O 1.21718 * 119.99989 * 359.70747 * 8 7 6 10 10 N 1.34784 * 119.99779 * 179.70887 * 8 7 6 11 11 C 1.46494 * 119.99635 * 180.02562 * 10 8 7 12 12 H 1.08995 * 112.85546 * 23.80497 * 11 10 8 13 13 C 1.53782 * 113.61176 * 155.00482 * 11 10 8 14 14 C 1.53779 * 87.08415 * 89.11507 * 13 11 10 15 15 H 1.08998 * 113.61131 * 270.88162 * 14 13 11 16 16 C 1.50697 * 113.61203 * 140.06550 * 14 13 11 17 17 C 1.38230 * 119.96773 * 119.99875 * 16 14 13 18 18 C 1.38230 * 120.04308 * 179.97438 * 17 16 14 19 19 C 1.38414 * 119.98558 * 0.02562 * 18 17 16 20 20 F 1.35098 * 120.03379 * 179.97438 * 19 18 17 21 21 C 1.38568 * 119.93784 * 359.97438 * 19 18 17 22 22 Br 1.89101 * 120.01843 * 180.02562 * 21 19 18 23 23 C 1.38251 * 119.97340 * 299.72355 * 16 14 13 24 24 C 1.53783 * 87.07964 * 25.43304 * 14 13 11 25 25 C 1.40561 * 106.83967 * 180.38622 * 7 6 5 26 26 N 1.30743 * 108.73895 * 0.22956 * 25 7 6 27 27 N 1.36576 * 120.23221 * 0.48732 * 6 5 4 28 28 C 1.36247 * 120.07785 * 359.50898 * 27 6 5 29 29 C 1.35184 * 120.70471 * 0.25815 * 28 27 6 30 30 H 0.96702 * 114.00058 * 60.00135 * 1 2 3 31 31 H 1.08999 * 109.46484 * 240.00256 * 2 1 3 32 32 H 1.48506 * 110.00402 * 298.68104 * 3 2 1 33 33 H 1.48501 * 110.00205 * 60.00322 * 3 2 1 34 34 H 1.08005 * 120.37318 * 0.02562 * 5 4 2 35 35 H 0.96995 * 120.00015 * 359.72584 * 10 8 7 36 36 H 1.09009 * 113.61196 * 203.66403 * 13 11 10 37 37 H 1.08999 * 113.61212 * 334.47478 * 13 11 10 38 38 H 1.07995 * 119.97706 * 0.02562 * 17 16 14 39 39 H 1.08002 * 120.01182 * 179.97438 * 18 17 16 40 40 H 1.08001 * 119.98973 * 359.97438 * 23 16 14 41 41 H 1.09003 * 113.60957 * 220.02254 * 24 14 13 42 42 H 1.08998 * 113.61171 * 89.12181 * 24 14 13 43 43 H 1.07994 * 125.62699 * 180.20720 * 25 7 6 44 44 H 1.07999 * 119.64344 * 180.28149 * 28 27 6 45 45 H 1.08003 * 119.84092 * 179.97438 * 29 28 27 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4291 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9314 -0.7105 1.2303 5 6 2.7159 -1.8206 1.1121 6 6 3.1748 -2.4611 2.2705 7 6 3.9745 -3.6012 2.4820 8 6 4.5753 -4.4505 1.4496 9 8 4.3959 -4.1970 0.2727 10 7 5.3265 -5.5122 1.8035 11 6 5.9275 -6.3606 0.7715 12 1 6.0584 -5.8431 -0.1787 13 6 7.1856 -7.1080 1.2444 14 6 6.2473 -8.2372 1.7017 15 1 5.8876 -8.1189 2.7238 16 6 6.7856 -9.6177 1.4269 17 6 6.9999 -10.4961 2.4725 18 6 7.4931 -11.7629 2.2221 19 6 7.7729 -12.1522 0.9237 20 9 8.2554 -13.3899 0.6779 21 6 7.5578 -11.2711 -0.1240 22 35 7.9387 -11.8008 -1.8989 23 6 7.0591 -10.0066 0.1287 24 6 5.2557 -7.7375 0.6378 25 6 4.0907 -3.7646 3.8733 26 7 3.4180 -2.8128 4.4656 27 7 2.8309 -1.9831 3.5027 28 6 2.0470 -0.8739 3.6105 29 6 1.5967 -0.2370 2.5064 30 1 -0.3933 0.4417 -0.7651 31 1 1.7923 -0.5138 -0.8900 32 1 1.5879 2.4586 -1.2242 33 1 1.5616 2.4678 1.2085 34 1 2.9834 -2.1988 0.1365 35 1 5.4727 -5.7118 2.7413 36 1 7.8530 -7.3968 0.4322 37 1 7.7060 -6.6120 2.0637 38 1 6.7812 -10.1926 3.4856 39 1 7.6608 -12.4486 3.0395 40 1 6.8866 -9.3212 -0.6879 41 1 4.2172 -7.7505 0.9686 42 1 5.3954 -8.1985 -0.3400 43 1 4.6440 -4.5474 4.3707 44 1 1.7831 -0.4993 4.5885 45 1 0.9758 0.6409 2.6081 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_9650940_11618758.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:53:59 Heat of formation + Delta-G solvation = 58.266591 kcal Electronic energy + Delta-G solvation = -33192.652994 eV Core-core repulsion = 28333.506549 eV Total energy + Delta-G solvation = -4859.146445 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 446.043 amu Computer time = 0.71 seconds Orbital eigenvalues (eV) -49.96693 -43.28518 -41.60483 -40.16030 -39.26895 -38.60080 -37.43109 -34.53520 -34.19538 -33.54155 -32.16402 -31.72118 -30.44791 -30.14057 -27.43197 -26.83591 -26.24976 -24.97904 -24.22491 -23.67069 -23.02343 -22.55125 -21.29521 -20.27412 -19.27538 -18.86982 -18.60300 -17.94956 -17.78483 -17.53561 -17.13376 -16.90313 -16.75142 -16.71382 -16.61329 -15.91031 -15.73001 -15.62779 -15.54000 -15.37372 -14.74886 -14.66870 -14.51263 -14.33990 -14.21118 -14.08742 -14.05001 -13.91019 -13.56592 -13.29981 -13.27616 -13.02882 -12.75005 -12.47697 -12.14802 -12.12561 -12.08139 -11.93440 -11.64136 -11.56660 -11.39360 -11.28682 -10.87372 -10.78702 -10.30162 -10.09371 -10.00537 -9.61246 -8.76041 -5.08952 -0.56540 -0.20720 -0.11019 -0.05511 0.48014 1.00542 1.04931 1.09795 1.46069 1.76625 2.03960 2.18153 2.23688 2.56325 2.94258 3.01676 3.11497 3.29503 3.42008 3.44801 3.51565 3.54912 3.58637 3.69300 3.80407 3.84731 3.92454 3.93837 3.98685 4.10514 4.14497 4.23868 4.31383 4.36344 4.52984 4.55162 4.60696 4.71089 4.73562 4.76621 4.81358 4.83152 4.93581 4.94937 5.06329 5.10392 5.15908 5.26135 5.29818 5.56022 5.61603 5.65604 6.24285 6.31689 6.58167 7.37593 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.532 6.532 2 C -0.077 4.077 3 Si 0.692 3.308 4 C -0.025 4.025 5 C -0.093 4.093 6 C 0.170 3.830 7 C -0.317 4.317 8 C 0.606 3.394 9 O -0.547 6.547 10 N -0.713 5.713 11 C 0.125 3.875 12 H 0.108 0.892 13 C -0.137 4.137 14 C -0.073 4.073 15 H 0.103 0.897 16 C -0.075 4.075 17 C -0.071 4.071 18 C -0.144 4.144 19 C 0.122 3.878 20 F -0.124 7.124 21 C -0.128 4.128 22 Br -0.027 7.027 23 C -0.061 4.061 24 C -0.146 4.146 25 C 0.119 3.881 26 N -0.313 5.313 27 N -0.264 5.264 28 C 0.115 3.885 29 C -0.144 4.144 30 H 0.385 0.615 31 H 0.084 0.916 32 H -0.251 1.251 33 H -0.248 1.248 34 H 0.165 0.835 35 H 0.398 0.602 36 H 0.099 0.901 37 H 0.080 0.920 38 H 0.140 0.860 39 H 0.146 0.854 40 H 0.144 0.856 41 H 0.078 0.922 42 H 0.095 0.905 43 H 0.198 0.802 44 H 0.177 0.823 45 H 0.160 0.840 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.595 4.068 2.341 4.731 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.340 6.340 2 C -0.186 4.186 3 Si 0.590 3.410 4 C -0.030 4.030 5 C -0.112 4.112 6 C 0.049 3.951 7 C -0.332 4.332 8 C 0.395 3.605 9 O -0.425 6.425 10 N -0.363 5.363 11 C 0.020 3.980 12 H 0.126 0.874 13 C -0.175 4.175 14 C -0.092 4.092 15 H 0.122 0.878 16 C -0.076 4.076 17 C -0.090 4.090 18 C -0.164 4.164 19 C 0.101 3.899 20 F -0.102 7.102 21 C -0.209 4.209 22 Br 0.059 6.941 23 C -0.081 4.081 24 C -0.185 4.185 25 C -0.062 4.062 26 N -0.133 5.133 27 N -0.028 5.028 28 C -0.011 4.011 29 C -0.165 4.165 30 H 0.234 0.766 31 H 0.103 0.897 32 H -0.176 1.176 33 H -0.172 1.172 34 H 0.183 0.817 35 H 0.233 0.767 36 H 0.117 0.883 37 H 0.099 0.901 38 H 0.158 0.842 39 H 0.163 0.837 40 H 0.162 0.838 41 H 0.097 0.903 42 H 0.113 0.887 43 H 0.214 0.786 44 H 0.194 0.806 45 H 0.177 0.823 Dipole moment (debyes) X Y Z Total from point charges 0.210 4.940 2.605 5.589 hybrid contribution -0.775 -0.956 -0.284 1.263 sum -0.565 3.985 2.321 4.646 Atomic orbital electron populations 1.86579 1.16965 1.80345 1.50123 1.24730 0.85045 1.11290 0.97504 0.94460 0.91710 0.73457 0.81350 1.19356 0.95395 0.94125 0.94134 1.20666 0.98440 0.93858 0.98256 1.19226 0.95625 0.94147 0.86094 1.19550 1.16548 1.03635 0.93490 1.16806 0.77233 0.79152 0.87312 1.90785 1.61207 1.71948 1.18554 1.45349 1.52745 1.28784 1.09471 1.21770 0.92983 0.90333 0.92954 0.87386 1.23460 0.96263 0.95425 1.02329 1.21632 0.97233 0.89828 1.00464 0.87837 1.19768 0.99396 0.96140 0.92324 1.21090 0.96121 0.92002 0.99749 1.21200 1.02075 0.98277 0.94829 1.17436 0.98685 0.80630 0.93185 1.91577 1.85076 1.38625 1.94950 1.21981 1.09527 0.97667 0.91706 1.96830 1.93854 1.91569 1.11855 1.20901 0.96040 0.93450 0.97659 1.23607 0.99497 0.96002 0.99369 1.24043 0.94409 0.95768 0.91952 1.77637 1.18469 1.06411 1.10819 1.46084 1.31981 1.18977 1.05803 1.21568 0.92368 0.85280 1.01848 1.20797 1.02725 1.02562 0.90424 0.76626 0.89749 1.17550 1.17154 0.81737 0.76708 0.88283 0.90137 0.84222 0.83663 0.83837 0.90342 0.88674 0.78557 0.80551 0.82291 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 0.31 12.76 -35.23 -0.45 -0.14 16 2 C -0.08 0.12 2.81 36.00 0.10 0.22 16 3 Si 0.69 -1.71 31.97 -169.99 -5.43 -7.15 16 4 C -0.02 0.00 4.53 -104.55 -0.47 -0.47 16 5 C -0.09 -0.12 9.35 -39.53 -0.37 -0.49 16 6 C 0.17 0.42 6.76 -84.07 -0.57 -0.15 16 7 C -0.32 -0.55 6.17 -104.67 -0.65 -1.19 16 8 C 0.61 1.18 7.78 -12.90 -0.10 1.08 16 9 O -0.55 -2.80 15.30 5.17 0.08 -2.72 16 10 N -0.71 1.07 5.25 -54.36 -0.29 0.78 16 11 C 0.13 -0.22 4.32 -67.12 -0.29 -0.51 16 12 H 0.11 0.00 7.46 -51.93 -0.39 -0.39 16 13 C -0.14 0.47 7.29 -25.92 -0.19 0.28 16 14 C -0.07 0.25 3.85 -90.96 -0.35 -0.10 16 15 H 0.10 -0.49 8.09 -51.93 -0.42 -0.91 16 16 C -0.08 0.14 5.29 -104.62 -0.55 -0.41 16 17 C -0.07 0.15 9.71 -39.59 -0.38 -0.23 16 18 C -0.14 0.10 10.03 -39.52 -0.40 -0.29 16 19 C 0.12 0.18 7.27 -39.39 -0.29 -0.10 16 20 F -0.12 -0.38 16.73 2.25 0.04 -0.34 16 21 C -0.13 -0.15 6.23 -39.45 -0.25 -0.39 16 22 Br -0.03 -0.05 33.28 -68.01 -2.26 -2.31 16 23 C -0.06 0.04 8.36 -39.57 -0.33 -0.29 16 24 C -0.15 0.32 7.25 -25.92 -0.19 0.13 16 25 C 0.12 0.00 11.44 -17.14 -0.20 -0.19 16 26 N -0.31 -0.71 12.57 30.75 0.39 -0.32 16 27 N -0.26 -0.53 3.86 -10.54 -0.04 -0.57 16 28 C 0.12 -0.04 11.17 -16.68 -0.19 -0.22 16 29 C -0.14 0.10 8.67 -39.95 -0.35 -0.24 16 30 H 0.39 -1.71 8.74 45.56 0.40 -1.32 16 31 H 0.08 -0.24 7.71 -51.93 -0.40 -0.64 16 32 H -0.25 0.13 7.11 56.52 0.40 0.53 16 33 H -0.25 0.05 7.07 56.52 0.40 0.45 16 34 H 0.17 0.21 7.01 -52.48 -0.37 -0.16 16 35 H 0.40 -1.69 7.62 -40.82 -0.31 -2.01 16 36 H 0.10 -0.33 7.73 -51.92 -0.40 -0.73 16 37 H 0.08 -0.32 8.14 -51.93 -0.42 -0.74 16 38 H 0.14 -0.62 8.05 -52.49 -0.42 -1.05 16 39 H 0.15 -0.34 8.06 -52.49 -0.42 -0.77 16 40 H 0.14 -0.28 6.65 -52.49 -0.35 -0.63 16 41 H 0.08 -0.09 8.14 -51.93 -0.42 -0.51 16 42 H 0.09 -0.22 6.30 -51.93 -0.33 -0.55 16 43 H 0.20 -0.87 7.46 -52.49 -0.39 -1.26 16 44 H 0.18 -0.54 8.06 -52.49 -0.42 -0.96 16 45 H 0.16 -0.35 7.52 -52.48 -0.39 -0.75 16 LS Contribution 406.94 15.07 6.13 6.13 Total: 0.00 -10.11 406.94 -12.50 -22.61 By element: Atomic # 1 Polarization: -7.72 SS G_CDS: -4.67 Total: -12.38 kcal Atomic # 6 Polarization: 2.42 SS G_CDS: -6.00 Total: -3.58 kcal Atomic # 7 Polarization: -0.17 SS G_CDS: 0.06 Total: -0.11 kcal Atomic # 8 Polarization: -2.49 SS G_CDS: -0.37 Total: -2.86 kcal Atomic # 9 Polarization: -0.38 SS G_CDS: 0.04 Total: -0.34 kcal Atomic # 14 Polarization: -1.71 SS G_CDS: -5.43 Total: -7.15 kcal Atomic # 35 Polarization: -0.05 SS G_CDS: -2.26 Total: -2.31 kcal Total LS contribution 6.13 Total: 6.13 kcal Total: -10.11 -12.50 -22.61 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9650940_11618758.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 80.880 kcal (2) G-P(sol) polarization free energy of solvation -10.111 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 70.769 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.503 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.613 kcal (6) G-S(sol) free energy of system = (1) + (5) 58.267 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.71 seconds