Wall clock time and date at job start Tue Mar 9 2021 12:54:08 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42905 * 1 3 3 Si 1.86295 * 109.47431 * 2 1 4 4 C 1.50702 * 109.47093 * 120.00156 * 2 1 3 5 5 C 1.37863 * 119.89114 * 65.27006 * 4 2 1 6 6 C 1.39653 * 119.87799 * 180.27305 * 5 4 2 7 7 C 1.47696 * 120.16834 * 179.72572 * 6 5 4 8 8 O 1.21566 * 120.00047 * 179.73331 * 7 6 5 9 9 N 1.34771 * 119.99672 * 359.72823 * 7 6 5 10 10 C 1.46499 * 119.99903 * 180.02562 * 9 7 6 11 11 H 1.08997 * 112.90637 * 336.24925 * 10 9 7 12 12 C 1.53779 * 113.61746 * 107.50534 * 10 9 7 13 13 C 1.53779 * 87.08402 * 89.11614 * 12 10 9 14 14 H 1.09002 * 113.61557 * 270.88569 * 13 12 10 15 15 C 1.50699 * 113.61429 * 139.98140 * 13 12 10 16 16 C 1.38220 * 119.96867 * 142.50500 * 15 13 12 17 17 C 1.38240 * 120.04374 * 179.97438 * 16 15 13 18 18 C 1.38403 * 119.98457 * 0.02562 * 17 16 15 19 19 F 1.35095 * 120.03528 * 180.02562 * 18 17 16 20 20 C 1.38574 * 119.94015 * 359.97438 * 18 17 16 21 21 Br 1.89102 * 120.02096 * 180.02562 * 20 18 17 22 22 C 1.38251 * 119.97341 * 322.23067 * 15 13 12 23 23 C 1.53784 * 87.08045 * 25.43458 * 13 12 10 24 24 C 1.39827 * 119.66691 * 359.45781 * 6 5 4 25 25 F 1.35098 * 120.11236 * 180.29452 * 24 6 5 26 26 C 1.38322 * 119.77659 * 0.27037 * 24 6 5 27 27 C 1.38196 * 120.11977 * 359.97438 * 26 24 6 28 28 H 0.96701 * 113.99497 * 300.00070 * 1 2 3 29 29 H 1.09005 * 109.46801 * 239.99743 * 2 1 3 30 30 H 1.48500 * 110.00022 * 178.67996 * 3 2 1 31 31 H 1.48500 * 109.99834 * 299.99686 * 3 2 1 32 32 H 1.08005 * 120.06035 * 0.03052 * 5 4 2 33 33 H 0.97001 * 120.00748 * 0.02562 * 9 7 6 34 34 H 1.09006 * 113.61280 * 203.66438 * 12 10 9 35 35 H 1.08999 * 113.61062 * 334.48192 * 12 10 9 36 36 H 1.07999 * 119.98211 * 359.97438 * 16 15 13 37 37 H 1.08000 * 120.00494 * 179.97438 * 17 16 15 38 38 H 1.08006 * 119.99371 * 359.97438 * 22 15 13 39 39 H 1.09004 * 113.61451 * 220.02152 * 23 13 12 40 40 H 1.08994 * 113.61477 * 89.11454 * 23 13 12 41 41 H 1.08006 * 119.93790 * 180.02562 * 26 24 6 42 42 H 1.08007 * 119.83320 * 179.97438 * 27 26 24 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4291 0.0000 0.0000 3 14 2.0501 1.7564 0.0000 4 6 1.9314 -0.7105 1.2305 5 6 1.6890 -2.0578 1.3929 6 6 2.1497 -2.7147 2.5360 7 6 1.8883 -4.1567 2.7195 8 8 2.2949 -4.7266 3.7134 9 7 1.1990 -4.8408 1.7850 10 6 0.9392 -6.2710 1.9672 11 1 1.6583 -6.7517 2.6306 12 6 -0.5251 -6.5926 2.3093 13 6 -0.7763 -6.6856 0.7950 14 1 -1.0521 -5.7347 0.3389 15 6 -1.6970 -7.8127 0.4039 16 6 -2.6077 -7.6363 -0.6208 17 6 -3.4527 -8.6694 -0.9812 18 6 -3.3870 -9.8809 -0.3154 19 9 -4.2119 -10.8914 -0.6671 20 6 -2.4737 -10.0571 0.7118 21 35 -2.3815 -11.7117 1.6225 22 6 -1.6260 -9.0240 1.0664 23 6 0.7154 -7.0295 0.6483 24 6 2.8645 -2.0016 3.5033 25 9 3.3194 -2.6293 4.6097 26 6 3.1046 -0.6513 3.3233 27 6 2.6401 -0.0092 2.1912 28 1 -0.3932 0.4417 0.7651 29 1 1.7923 -0.5139 -0.8900 30 1 3.5347 1.7701 0.0321 31 1 1.5617 2.4678 -1.2085 32 1 1.1404 -2.6036 0.6394 33 1 0.8747 -4.3863 0.9918 34 1 -0.6534 -7.5404 2.8322 35 1 -1.0520 -5.7688 2.7909 36 1 -2.6594 -6.6908 -1.1401 37 1 -4.1644 -8.5307 -1.7816 38 1 -0.9106 -9.1623 1.8636 39 1 1.1896 -6.5578 -0.2125 40 1 0.9262 -8.0966 0.7170 41 1 3.6568 -0.0980 4.0686 42 1 2.8299 1.0454 2.0555 There are 65 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 65 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_9650940_12335834.mol2 42 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:54:08 Heat of formation + Delta-G solvation = -61.538326 kcal Electronic energy + Delta-G solvation = -30916.384710 eV Core-core repulsion = 26125.430881 eV Total energy + Delta-G solvation = -4790.953830 eV No. of doubly occupied orbitals = 65 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 424.027 amu Computer time = 0.65 seconds Orbital eigenvalues (eV) -50.08914 -50.00866 -41.81064 -40.88406 -39.92251 -38.74838 -37.39660 -34.86374 -33.58050 -32.69490 -32.26730 -31.37003 -30.40647 -26.73437 -26.62988 -26.49113 -25.28817 -24.12177 -23.27879 -22.52209 -21.70042 -20.31060 -19.22859 -18.87362 -18.38784 -18.24823 -17.72169 -17.32198 -17.11978 -16.92630 -16.86089 -16.54018 -16.22001 -15.90630 -15.86021 -15.64931 -15.51760 -15.22121 -14.68795 -14.65241 -14.44946 -14.36277 -14.35016 -14.08261 -13.91942 -13.67626 -13.49756 -13.33394 -13.15112 -12.82698 -12.39400 -12.15463 -12.13780 -12.05019 -11.86243 -11.59648 -11.43059 -11.28626 -11.21706 -10.43491 -10.40875 -10.13284 -10.02553 -9.81612 -9.61076 -4.94757 -0.49158 -0.18606 -0.01847 -0.00517 0.42660 1.33802 1.59615 1.69164 1.90341 2.04456 2.29575 2.48236 3.02100 3.06095 3.36323 3.37285 3.47859 3.55849 3.58818 3.62027 3.66596 3.69545 3.89334 4.01944 4.03105 4.07084 4.11574 4.22842 4.41604 4.45575 4.59159 4.62054 4.73256 4.76889 4.77809 4.81506 4.84115 4.88031 4.92885 4.96312 5.01264 5.03110 5.12538 5.15555 5.35047 5.54446 5.60864 5.65271 6.35614 6.82071 7.05146 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.550 6.550 2 C -0.062 4.062 3 Si 0.764 3.236 4 C -0.134 4.134 5 C -0.023 4.023 6 C -0.188 4.188 7 C 0.557 3.443 8 O -0.571 6.571 9 N -0.690 5.690 10 C 0.112 3.888 11 H 0.084 0.916 12 C -0.145 4.145 13 C -0.060 4.060 14 H 0.129 0.871 15 C -0.072 4.072 16 C -0.062 4.062 17 C -0.145 4.145 18 C 0.095 3.905 19 F -0.140 7.140 20 C -0.143 4.143 21 Br -0.044 7.044 22 C -0.066 4.066 23 C -0.125 4.125 24 C 0.132 3.868 25 F -0.138 7.138 26 C -0.153 4.153 27 C -0.050 4.050 28 H 0.397 0.603 29 H 0.121 0.879 30 H -0.284 1.284 31 H -0.303 1.303 32 H 0.161 0.839 33 H 0.416 0.584 34 H 0.094 0.906 35 H 0.073 0.927 36 H 0.173 0.827 37 H 0.162 0.838 38 H 0.149 0.851 39 H 0.095 0.905 40 H 0.100 0.900 41 H 0.166 0.834 42 H 0.168 0.832 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.096 9.064 -4.366 10.120 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.358 6.358 2 C -0.173 4.173 3 Si 0.671 3.329 4 C -0.135 4.135 5 C -0.042 4.042 6 C -0.192 4.192 7 C 0.345 3.655 8 O -0.451 6.451 9 N -0.342 5.342 10 C 0.006 3.994 11 H 0.102 0.898 12 C -0.184 4.184 13 C -0.078 4.078 14 H 0.147 0.853 15 C -0.073 4.073 16 C -0.080 4.080 17 C -0.164 4.164 18 C 0.074 3.926 19 F -0.119 7.119 20 C -0.223 4.223 21 Br 0.041 6.959 22 C -0.085 4.085 23 C -0.163 4.163 24 C 0.112 3.888 25 F -0.116 7.116 26 C -0.172 4.172 27 C -0.067 4.067 28 H 0.248 0.752 29 H 0.138 0.862 30 H -0.211 1.211 31 H -0.231 1.231 32 H 0.179 0.821 33 H 0.255 0.745 34 H 0.113 0.887 35 H 0.091 0.909 36 H 0.190 0.810 37 H 0.180 0.820 38 H 0.167 0.833 39 H 0.113 0.887 40 H 0.118 0.882 41 H 0.184 0.816 42 H 0.185 0.815 Dipole moment (debyes) X Y Z Total from point charges -0.237 8.216 -4.259 9.258 hybrid contribution -0.096 -0.962 -0.197 0.986 sum -0.333 7.255 -4.455 8.520 Atomic orbital electron populations 1.86496 1.16618 1.82019 1.50667 1.25044 0.85620 1.10032 0.96609 0.93879 0.78071 0.75455 0.85469 1.20478 1.00621 0.94343 0.98054 1.21210 0.94635 0.94164 0.94164 1.20037 1.06969 0.93748 0.98475 1.18320 0.77710 0.86688 0.82805 1.90849 1.52794 1.70895 1.30565 1.45386 1.55602 1.09586 1.23625 1.21893 0.97467 0.80587 0.99427 0.89811 1.23583 0.95558 1.03048 0.96184 1.21650 0.92987 0.96981 0.96148 0.85318 1.19919 0.97330 0.94245 0.95776 1.21464 0.92025 0.99526 0.95018 1.21476 1.02407 0.90887 1.01623 1.17789 0.91356 0.86891 0.96535 1.91528 1.70165 1.59134 1.91034 1.22080 1.03558 0.95477 1.01223 1.96798 1.98278 1.25149 1.75684 1.21049 0.96924 0.91015 0.99539 1.23411 0.94537 1.01598 0.96778 1.18239 0.95593 0.91782 0.83204 1.91560 1.86367 1.82961 1.50709 1.21389 1.03312 0.91461 1.01011 1.21381 0.93324 1.00880 0.91161 0.75236 0.86192 1.21069 1.23102 0.82128 0.74469 0.88746 0.90858 0.80973 0.82037 0.83304 0.88663 0.88179 0.81642 0.81496 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 4.69 12.83 -148.98 -1.91 2.78 16 2 C -0.06 0.57 2.79 71.24 0.20 0.77 16 3 Si 0.76 -6.55 29.79 68.60 2.04 -4.50 16 4 C -0.13 1.05 5.34 -19.90 -0.11 0.94 16 5 C -0.02 0.14 9.17 22.52 0.21 0.35 16 6 C -0.19 -0.21 5.88 -20.05 -0.12 -0.33 16 7 C 0.56 2.83 7.77 86.74 0.67 3.50 16 8 O -0.57 -8.68 14.94 -3.93 -0.06 -8.73 16 9 N -0.69 2.23 5.21 -443.06 -2.31 -0.08 16 10 C 0.11 -0.32 4.32 45.52 0.20 -0.13 16 11 H 0.08 0.23 7.46 -2.39 -0.02 0.22 16 12 C -0.15 0.67 7.25 31.12 0.23 0.90 16 13 C -0.06 0.53 3.85 -11.01 -0.04 0.48 16 14 H 0.13 -1.71 8.09 -2.39 -0.02 -1.72 16 15 C -0.07 0.39 5.29 -19.87 -0.11 0.28 16 16 C -0.06 0.42 9.71 22.27 0.22 0.63 16 17 C -0.14 0.38 10.03 22.31 0.22 0.60 16 18 C 0.10 0.32 7.27 22.39 0.16 0.49 16 19 F -0.14 -1.03 16.73 44.97 0.75 -0.27 16 20 C -0.14 -0.44 6.23 22.35 0.14 -0.30 16 21 Br -0.04 -0.23 33.29 -20.37 -0.68 -0.91 16 22 C -0.07 0.10 8.33 22.28 0.19 0.28 16 23 C -0.13 1.00 7.29 31.12 0.23 1.22 16 24 C 0.13 0.47 7.29 22.67 0.17 0.64 16 25 F -0.14 -1.52 15.55 44.97 0.70 -0.82 16 26 C -0.15 0.57 10.01 22.28 0.22 0.80 16 27 C -0.05 0.41 8.66 22.31 0.19 0.60 16 28 H 0.40 -6.28 8.70 -74.06 -0.64 -6.92 16 29 H 0.12 -1.09 7.96 -2.38 -0.02 -1.11 16 30 H -0.28 0.99 7.11 99.48 0.71 1.70 16 31 H -0.30 -0.09 7.11 99.48 0.71 0.61 16 32 H 0.16 -1.83 6.41 -2.91 -0.02 -1.85 16 33 H 0.42 -4.23 6.73 -92.71 -0.62 -4.85 16 34 H 0.09 -0.38 6.32 -2.38 -0.02 -0.39 16 35 H 0.07 -0.22 8.14 -2.39 -0.02 -0.24 16 36 H 0.17 -2.27 8.05 -2.91 -0.02 -2.29 16 37 H 0.16 -1.03 8.06 -2.91 -0.02 -1.05 16 38 H 0.15 -0.49 6.67 -2.91 -0.02 -0.51 16 39 H 0.09 -0.98 8.14 -2.39 -0.02 -1.00 16 40 H 0.10 -0.72 7.71 -2.39 -0.02 -0.74 16 41 H 0.17 -1.25 8.06 -2.91 -0.02 -1.27 16 42 H 0.17 -2.29 4.89 -2.91 -0.01 -2.31 16 Total: 0.00 -25.86 380.46 1.30 -24.56 By element: Atomic # 1 Polarization: -23.63 SS G_CDS: -0.11 Total: -23.74 kcal Atomic # 6 Polarization: 8.86 SS G_CDS: 2.87 Total: 11.72 kcal Atomic # 7 Polarization: 2.23 SS G_CDS: -2.31 Total: -0.08 kcal Atomic # 8 Polarization: -3.99 SS G_CDS: -1.97 Total: -5.96 kcal Atomic # 9 Polarization: -2.55 SS G_CDS: 1.45 Total: -1.10 kcal Atomic # 14 Polarization: -6.55 SS G_CDS: 2.04 Total: -4.50 kcal Atomic # 35 Polarization: -0.23 SS G_CDS: -0.68 Total: -0.91 kcal Total: -25.86 1.30 -24.56 kcal The number of atoms in the molecule is 42 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9650940_12335834.mol2 42 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -36.976 kcal (2) G-P(sol) polarization free energy of solvation -25.860 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -62.836 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.298 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -24.562 kcal (6) G-S(sol) free energy of system = (1) + (5) -61.538 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.65 seconds