Wall clock time and date at job start Tue Mar 9 2021 12:54:45 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42902 * 1 3 3 Si 1.86307 * 109.46784 * 2 1 4 4 C 1.50697 * 109.47208 * 239.99796 * 2 1 3 5 5 C 1.38402 * 119.83055 * 299.99997 * 4 2 1 6 6 C 1.37891 * 120.17107 * 180.02562 * 5 4 2 7 7 C 1.39833 * 119.82645 * 0.27980 * 6 5 4 8 8 C 1.47207 * 120.16914 * 179.70073 * 7 6 5 9 9 C 1.34815 * 120.00031 * 179.97438 * 8 7 6 10 10 C 1.46423 * 119.99661 * 179.97438 * 9 8 7 11 11 O 1.21697 * 120.00604 * 0.02562 * 10 9 8 12 12 N 1.34780 * 119.99774 * 179.97438 * 10 9 8 13 13 C 1.46498 * 120.00153 * 179.97438 * 12 10 9 14 14 H 1.09001 * 112.84651 * 25.34086 * 13 12 10 15 15 C 1.53780 * 113.61485 * 156.53121 * 13 12 10 16 16 C 1.53778 * 87.08045 * 89.11663 * 15 13 12 17 17 H 1.08991 * 113.61605 * 270.79933 * 16 15 13 18 18 C 1.50704 * 113.61155 * 139.98003 * 16 15 13 19 19 C 1.38215 * 119.97191 * 299.72955 * 18 16 15 20 20 C 1.38296 * 120.01397 * 179.72636 * 19 18 16 21 21 Br 1.89103 * 120.02322 * 180.27419 * 20 19 18 22 22 C 1.38521 * 119.95941 * 0.54681 * 20 19 18 23 23 F 1.35103 * 120.03490 * 179.70270 * 22 20 19 24 24 C 1.38460 * 119.93773 * 359.72791 * 22 20 19 25 25 C 1.38194 * 119.98228 * 359.97438 * 24 22 20 26 26 C 1.53778 * 113.61879 * 254.13957 * 13 12 10 27 27 C 1.39840 * 119.65967 * 359.42081 * 7 6 5 28 28 C 1.37884 * 119.82788 * 0.57638 * 27 7 6 29 29 H 0.96700 * 113.99728 * 60.00348 * 1 2 3 30 30 H 1.08997 * 109.47261 * 119.99339 * 2 1 3 31 31 H 1.48489 * 110.00036 * 59.99724 * 3 2 1 32 32 H 1.48499 * 109.99743 * 181.32235 * 3 2 1 33 33 H 1.07995 * 119.90929 * 359.97233 * 5 4 2 34 34 H 1.08002 * 120.08253 * 179.97438 * 6 5 4 35 35 H 1.07996 * 120.00031 * 359.97438 * 8 7 6 36 36 H 1.07996 * 119.99938 * 0.02562 * 9 8 7 37 37 H 0.96996 * 119.99816 * 0.02562 * 12 10 9 38 38 H 1.08999 * 113.61256 * 203.66904 * 15 13 12 39 39 H 1.09001 * 113.61146 * 334.48608 * 15 13 12 40 40 H 1.07999 * 119.98932 * 359.97438 * 19 18 16 41 41 H 1.08003 * 120.00642 * 180.02562 * 24 22 20 42 42 H 1.08000 * 119.97027 * 179.97438 * 25 24 22 43 43 H 1.09005 * 113.61001 * 25.43372 * 26 13 12 44 44 H 1.08996 * 113.61810 * 156.33146 * 26 13 12 45 45 H 1.08004 * 120.08371 * 180.29910 * 27 7 6 46 46 H 1.08003 * 119.91907 * 179.69443 * 28 27 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0499 1.7566 0.0000 4 6 1.9314 -0.7104 -1.2304 5 6 1.5949 -2.0355 -1.4459 6 6 2.0511 -2.6926 -2.5691 7 6 2.8605 -2.0183 -3.4886 8 6 3.3572 -2.7143 -4.6869 9 6 4.1369 -2.0608 -5.5714 10 6 4.6313 -2.7533 -6.7630 11 8 4.3381 -3.9187 -6.9552 12 7 5.4104 -2.0998 -7.6476 13 6 5.9056 -2.7929 -8.8395 14 1 5.2699 -3.6260 -9.1394 15 6 6.2675 -1.8466 -9.9965 16 6 7.6782 -1.7709 -9.3892 17 1 7.7949 -0.9751 -8.6537 18 6 8.7796 -1.7833 -10.4177 19 6 8.9139 -2.8610 -11.2726 20 6 9.9208 -2.8708 -12.2206 21 35 10.1000 -4.3416 -13.3955 22 6 10.8016 -1.8050 -12.3052 23 9 11.7895 -1.8157 -13.2267 24 6 10.6689 -0.7289 -11.4441 25 6 9.6580 -0.7189 -10.5018 26 6 7.3990 -3.1524 -8.7673 27 6 3.1909 -0.6776 -3.2670 28 6 2.7269 -0.0343 -2.1391 29 1 -0.3933 0.4417 -0.7651 30 1 1.7924 -0.5137 0.8900 31 1 1.5614 2.4679 1.2084 32 1 3.5345 1.7704 -0.0322 33 1 0.9741 -2.5564 -0.7320 34 1 1.7880 -3.7267 -2.7356 35 1 3.0969 -3.7485 -4.8574 36 1 4.3975 -1.0267 -5.4007 37 1 5.6438 -1.1709 -7.4946 38 1 6.2387 -2.3238 -10.9760 39 1 5.7283 -0.8997 -9.9710 40 1 8.2299 -3.6939 -11.2030 41 1 11.3548 0.1029 -11.5093 42 1 9.5550 0.1203 -9.8300 43 1 7.7738 -3.2583 -7.7492 44 1 7.6791 -3.9859 -9.4114 45 1 3.8116 -0.1488 -3.9752 46 1 2.9853 0.9996 -1.9640 There are 67 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 67 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_9650940_12360594.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:54:45 Heat of formation + Delta-G solvation = -5.294977 kcal Electronic energy + Delta-G solvation = -30323.791588 eV Core-core repulsion = 25720.966869 eV Total energy + Delta-G solvation = -4602.824719 eV No. of doubly occupied orbitals = 67 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 432.052 amu Computer time = 0.76 seconds Orbital eigenvalues (eV) -50.07804 -41.61413 -40.69744 -40.26895 -38.77943 -37.74567 -35.04179 -34.55597 -33.53639 -32.21280 -31.71311 -31.04648 -30.39511 -27.36854 -26.69087 -26.08382 -24.42668 -24.00969 -23.71639 -22.59617 -22.06755 -20.54252 -20.09783 -18.94091 -18.79415 -18.14663 -17.68966 -17.24862 -17.02464 -16.85337 -16.63962 -16.40166 -16.17120 -15.92318 -15.76666 -15.50646 -15.26039 -15.05200 -14.70686 -14.64081 -14.53674 -14.33086 -14.16851 -14.06513 -13.89041 -13.77638 -13.44197 -13.27778 -13.22697 -13.00556 -12.37389 -12.25135 -12.10800 -12.02733 -12.01233 -11.68743 -11.56374 -11.41682 -11.33621 -11.23922 -11.06273 -10.42537 -10.10712 -10.00811 -9.96879 -9.59606 -9.21639 -4.98833 -0.53152 -0.17334 0.00825 0.41197 0.43658 0.90504 1.32397 1.64609 1.98739 2.15893 2.24649 2.31639 2.83650 3.03318 3.41389 3.49079 3.57653 3.61101 3.63784 3.69289 3.72877 3.83890 3.93499 3.96674 4.05296 4.08858 4.19496 4.23783 4.25948 4.37678 4.44500 4.46012 4.53197 4.66581 4.76974 4.83047 4.84653 4.86125 4.87181 4.97700 4.99945 5.04739 5.05139 5.11199 5.18090 5.20283 5.38956 5.41959 5.49870 5.61595 5.62951 5.67980 5.91852 6.57904 6.76543 7.25691 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.557 6.557 2 C -0.081 4.081 3 Si 0.783 3.217 4 C -0.113 4.113 5 C -0.109 4.109 6 C -0.104 4.104 7 C -0.081 4.081 8 C -0.023 4.023 9 C -0.205 4.205 10 C 0.543 3.457 11 O -0.593 6.593 12 N -0.692 5.692 13 C 0.113 3.887 14 H 0.080 0.920 15 C -0.125 4.125 16 C -0.059 4.059 17 H 0.130 0.870 18 C -0.072 4.072 19 C -0.066 4.066 20 C -0.143 4.143 21 Br -0.045 7.045 22 C 0.094 3.906 23 F -0.140 7.140 24 C -0.145 4.145 25 C -0.062 4.062 26 C -0.147 4.147 27 C -0.093 4.093 28 C -0.122 4.122 29 H 0.396 0.604 30 H 0.104 0.896 31 H -0.304 1.304 32 H -0.280 1.280 33 H 0.126 0.874 34 H 0.134 0.866 35 H 0.119 0.881 36 H 0.168 0.832 37 H 0.420 0.580 38 H 0.096 0.904 39 H 0.097 0.903 40 H 0.149 0.851 41 H 0.162 0.838 42 H 0.174 0.826 43 H 0.071 0.929 44 H 0.091 0.909 45 H 0.161 0.839 46 H 0.151 0.849 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.007 8.806 1.150 8.937 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.365 6.365 2 C -0.190 4.190 3 Si 0.689 3.311 4 C -0.113 4.113 5 C -0.127 4.127 6 C -0.122 4.122 7 C -0.081 4.081 8 C -0.043 4.043 9 C -0.225 4.225 10 C 0.334 3.666 11 O -0.475 6.475 12 N -0.343 5.343 13 C 0.007 3.993 14 H 0.098 0.902 15 C -0.163 4.163 16 C -0.077 4.077 17 H 0.148 0.852 18 C -0.073 4.073 19 C -0.086 4.086 20 C -0.224 4.224 21 Br 0.040 6.960 22 C 0.073 3.927 23 F -0.119 7.119 24 C -0.164 4.164 25 C -0.080 4.080 26 C -0.186 4.186 27 C -0.110 4.110 28 C -0.139 4.139 29 H 0.246 0.754 30 H 0.122 0.878 31 H -0.233 1.233 32 H -0.207 1.207 33 H 0.144 0.856 34 H 0.152 0.848 35 H 0.137 0.863 36 H 0.185 0.815 37 H 0.258 0.742 38 H 0.115 0.885 39 H 0.115 0.885 40 H 0.166 0.834 41 H 0.179 0.821 42 H 0.191 0.809 43 H 0.090 0.910 44 H 0.109 0.891 45 H 0.179 0.821 46 H 0.168 0.832 Dipole moment (debyes) X Y Z Total from point charges -0.528 7.718 1.461 7.873 hybrid contribution 0.448 -0.698 0.203 0.854 sum -0.079 7.020 1.664 7.215 Atomic orbital electron populations 1.86476 1.17290 1.82213 1.50530 1.25287 0.85318 1.11237 0.97175 0.93686 0.77830 0.74823 0.84775 1.20616 0.98556 0.95080 0.97053 1.21051 0.99623 0.94370 0.97630 1.21602 0.96372 1.00540 0.93702 1.19120 0.99431 0.94667 0.94891 1.22354 0.91906 0.99148 0.90900 1.23014 1.02656 1.02382 0.94494 1.18769 0.77849 0.85962 0.84021 1.90828 1.60108 1.19005 1.77595 1.45405 1.50564 1.16059 1.22280 1.21820 0.94976 0.96512 0.85973 0.90189 1.23379 0.94667 1.00755 0.97472 1.21702 0.91349 0.99053 0.95612 0.85167 1.19960 0.97341 0.93343 0.96640 1.21053 0.95484 0.99658 0.92399 1.22082 1.02517 0.95301 1.02471 1.96797 1.97942 1.39761 1.61479 1.17802 0.87776 0.96217 0.90884 1.91530 1.59473 1.96611 1.64285 1.21484 1.01488 0.97681 0.95760 1.21471 0.91487 0.98662 0.96407 1.23630 0.95545 0.97437 1.01969 1.21672 0.98677 0.93134 0.97533 1.21196 0.97986 1.00503 0.94232 0.75442 0.87828 1.23278 1.20720 0.85589 0.84817 0.86267 0.81484 0.74157 0.88537 0.88488 0.83366 0.82052 0.80877 0.91033 0.89094 0.82150 0.83198 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.56 0.50 12.76 -148.98 -1.90 -1.40 16 2 C -0.08 0.17 2.82 71.24 0.20 0.37 16 3 Si 0.78 -3.58 29.77 68.60 2.04 -1.54 16 4 C -0.11 0.23 5.40 -19.78 -0.11 0.13 16 5 C -0.11 0.01 9.59 22.23 0.21 0.22 16 6 C -0.10 0.04 9.80 22.57 0.22 0.26 16 7 C -0.08 0.15 5.87 -20.15 -0.12 0.03 16 8 C -0.02 0.02 9.46 23.84 0.23 0.24 16 9 C -0.21 0.82 9.41 23.62 0.22 1.04 16 10 C 0.54 0.71 7.74 86.37 0.67 1.38 16 11 O -0.59 -6.92 15.85 -4.34 -0.07 -6.99 16 12 N -0.69 4.02 5.26 -444.26 -2.34 1.68 16 13 C 0.11 -0.49 4.30 45.52 0.20 -0.29 16 14 H 0.08 0.13 7.50 -2.39 -0.02 0.11 16 15 C -0.12 1.13 7.29 31.12 0.23 1.36 16 16 C -0.06 0.58 3.87 -10.92 -0.04 0.54 16 17 H 0.13 -1.89 8.09 -2.39 -0.02 -1.91 16 18 C -0.07 0.43 5.29 -19.86 -0.11 0.33 16 19 C -0.07 0.13 8.36 22.28 0.19 0.31 16 20 C -0.14 -0.39 6.23 22.35 0.14 -0.25 16 21 Br -0.05 -0.22 33.28 -20.37 -0.68 -0.90 16 22 C 0.09 0.29 7.27 22.39 0.16 0.45 16 23 F -0.14 -0.99 16.73 44.97 0.75 -0.24 16 24 C -0.14 0.45 10.03 22.31 0.22 0.67 16 25 C -0.06 0.46 9.71 22.26 0.22 0.68 16 26 C -0.15 0.79 7.27 31.21 0.23 1.02 16 27 C -0.09 0.52 9.41 22.57 0.21 0.74 16 28 C -0.12 0.64 8.65 22.23 0.19 0.83 16 29 H 0.40 -3.60 8.70 -74.06 -0.64 -4.24 16 30 H 0.10 -0.04 7.96 -2.39 -0.02 -0.06 16 31 H -0.30 -1.16 7.11 99.48 0.71 -0.45 16 32 H -0.28 0.21 7.11 99.48 0.71 0.92 16 33 H 0.13 -0.01 8.06 -2.91 -0.02 -0.03 16 34 H 0.13 -0.28 8.06 -2.91 -0.02 -0.30 16 35 H 0.12 0.31 7.52 -2.91 -0.02 0.29 16 36 H 0.17 -2.04 6.07 -2.91 -0.02 -2.05 16 37 H 0.42 -5.58 8.68 -92.71 -0.81 -6.39 16 38 H 0.10 -0.76 7.73 -2.39 -0.02 -0.78 16 39 H 0.10 -1.13 8.14 -2.39 -0.02 -1.15 16 40 H 0.15 -0.54 6.64 -2.91 -0.02 -0.55 16 41 H 0.16 -1.11 8.06 -2.91 -0.02 -1.13 16 42 H 0.17 -2.44 8.05 -2.91 -0.02 -2.47 16 43 H 0.07 -0.26 8.14 -2.38 -0.02 -0.28 16 44 H 0.09 -0.40 6.30 -2.39 -0.02 -0.41 16 45 H 0.16 -1.95 6.17 -2.91 -0.02 -1.97 16 46 H 0.15 -1.47 4.85 -2.91 -0.01 -1.49 16 Total: 0.00 -24.49 410.35 0.82 -23.67 By element: Atomic # 1 Polarization: -23.99 SS G_CDS: -0.35 Total: -24.34 kcal Atomic # 6 Polarization: 6.70 SS G_CDS: 3.36 Total: 10.06 kcal Atomic # 7 Polarization: 4.02 SS G_CDS: -2.34 Total: 1.68 kcal Atomic # 8 Polarization: -6.42 SS G_CDS: -1.97 Total: -8.39 kcal Atomic # 9 Polarization: -0.99 SS G_CDS: 0.75 Total: -0.24 kcal Atomic # 14 Polarization: -3.58 SS G_CDS: 2.04 Total: -1.54 kcal Atomic # 35 Polarization: -0.22 SS G_CDS: -0.68 Total: -0.90 kcal Total: -24.49 0.82 -23.67 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9650940_12360594.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 18.372 kcal (2) G-P(sol) polarization free energy of solvation -24.489 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -6.117 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.822 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.667 kcal (6) G-S(sol) free energy of system = (1) + (5) -5.295 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.76 seconds