Wall clock time and date at job start Tue Mar 9 2021 12:54:53 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42903 * 1 3 3 C 1.35658 * 116.99455 * 2 1 4 4 C 1.40137 * 120.14501 * 179.97438 * 3 2 1 5 5 C 1.47541 * 120.19238 * 0.02562 * 4 3 2 6 6 O 1.21583 * 120.00002 * 0.02562 * 5 4 3 7 7 N 1.34777 * 119.99728 * 179.97438 * 5 4 3 8 8 C 1.46499 * 119.99665 * 179.72391 * 7 5 4 9 9 H 1.09004 * 112.85025 * 334.94284 * 8 7 5 10 10 C 1.53777 * 113.61716 * 106.14251 * 8 7 5 11 11 C 1.54051 * 86.98700 * 89.15735 * 10 8 7 12 12 H 1.08993 * 113.61998 * 270.88788 * 11 10 8 13 13 C 1.50706 * 113.69452 * 139.98916 * 11 10 8 14 14 C 1.38215 * 119.96814 * 322.20255 * 13 11 10 15 15 C 1.38303 * 120.01063 * 179.72659 * 14 13 11 16 16 Br 1.89106 * 120.02115 * 180.27223 * 15 14 13 17 17 C 1.38516 * 119.95663 * 0.54038 * 15 14 13 18 18 F 1.35108 * 120.03042 * 179.70861 * 17 15 14 19 19 C 1.38450 * 119.94303 * 359.73073 * 17 15 14 20 20 C 1.38192 * 119.98374 * 359.97438 * 19 17 15 21 21 C 1.53780 * 113.61505 * 203.74929 * 8 7 5 22 22 C 1.39704 * 119.61734 * 180.29504 * 4 3 2 23 23 C 1.37795 * 119.90559 * 359.47288 * 22 4 3 24 24 C 1.50702 * 119.84804 * 180.25305 * 23 22 4 25 25 O 1.42898 * 109.46985 * 65.25763 * 24 23 22 26 26 Si 1.86299 * 109.46931 * 185.25449 * 24 23 22 27 27 C 1.38545 * 120.29855 * 0.50695 * 23 22 4 28 28 C 1.38051 * 120.38943 * 359.76692 * 27 23 22 29 29 H 1.08995 * 109.47474 * 300.00245 * 1 2 3 30 30 H 1.09005 * 109.47219 * 60.00257 * 1 2 3 31 31 H 1.09003 * 109.46901 * 179.97438 * 1 2 3 32 32 H 0.97001 * 120.00485 * 0.02562 * 7 5 4 33 33 H 1.08998 * 113.61893 * 203.66386 * 10 8 7 34 34 H 1.09002 * 113.61386 * 334.56623 * 10 8 7 35 35 H 1.07996 * 119.99829 * 359.97438 * 14 13 11 36 36 H 1.07999 * 120.01020 * 180.02562 * 19 17 15 37 37 H 1.08003 * 119.97791 * 180.02562 * 20 19 17 38 38 H 1.09001 * 113.61616 * 25.43376 * 21 8 7 39 39 H 1.09000 * 113.61670 * 156.33503 * 21 8 7 40 40 H 1.07999 * 120.04869 * 179.69841 * 22 4 3 41 41 H 1.09000 * 109.46974 * 305.25260 * 24 23 22 42 42 H 0.96697 * 114.00717 * 59.99656 * 25 24 23 43 43 H 1.48493 * 110.00167 * 180.02562 * 26 24 23 44 44 H 1.48504 * 110.00089 * 301.32253 * 26 24 23 45 45 H 1.07998 * 119.80255 * 179.74358 * 27 23 22 46 46 H 1.08004 * 119.95375 * 179.97438 * 28 27 23 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0448 1.2088 0.0000 4 6 3.4440 1.2858 0.0005 5 6 4.2550 0.0532 0.0005 6 8 3.7095 -1.0334 -0.0004 7 7 5.6005 0.1319 0.0005 8 6 6.4057 -1.0919 0.0067 9 1 5.8780 -1.9437 0.4360 10 6 7.0719 -1.3978 -1.3451 11 6 8.2618 -0.5489 -0.8586 12 1 8.1702 0.5101 -1.0997 13 6 9.6057 -1.1198 -1.2316 14 6 9.8071 -2.4869 -1.2032 15 6 11.0384 -3.0122 -1.5508 16 35 11.3118 -4.8831 -1.5194 17 6 12.0727 -2.1666 -1.9165 18 9 13.2779 -2.6778 -2.2506 19 6 11.8707 -0.7971 -1.9389 20 6 10.6376 -0.2752 -1.5970 21 6 7.8215 -0.8950 0.5736 22 6 4.0667 2.5364 0.0068 23 6 3.3036 3.6838 0.0014 24 6 3.9767 5.0322 0.0024 25 8 4.6996 5.2045 -1.2181 26 14 2.6883 6.3691 0.1550 27 6 1.9205 3.6034 0.0003 28 6 1.2924 2.3740 -0.0001 29 1 -0.3634 0.5138 0.8899 30 1 -0.3634 0.5138 -0.8900 31 1 -0.3633 -1.0277 -0.0005 32 1 6.0357 0.9988 0.0009 33 1 7.3149 -2.4513 -1.4838 34 1 6.5467 -0.9678 -2.1980 35 1 9.0016 -3.1454 -0.9134 36 1 12.6763 -0.1369 -2.2242 37 1 10.4800 0.7931 -1.6149 38 1 7.9012 -0.0593 1.2688 39 1 8.2691 -1.8112 0.9586 40 1 5.1445 2.6038 0.0122 41 1 4.6657 5.0937 0.8447 42 1 4.1483 5.1614 -2.0114 43 1 3.3391 7.7038 0.1566 44 1 1.7239 6.2761 -0.9704 45 1 1.3303 4.5078 0.0003 46 1 0.2138 2.3195 -0.0005 There are 68 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 68 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_9650940_12496546.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:54:53 Heat of formation + Delta-G solvation = -50.100858 kcal Electronic energy + Delta-G solvation = -32942.984030 eV Core-core repulsion = 28147.760330 eV Total energy + Delta-G solvation = -4795.223699 eV No. of doubly occupied orbitals = 68 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 436.052 amu Computer time = 0.76 seconds Orbital eigenvalues (eV) -50.08534 -41.92297 -41.25780 -40.02944 -39.20451 -38.63821 -37.20067 -34.68983 -33.57135 -32.64626 -31.85629 -31.34654 -30.40375 -28.52210 -26.70812 -26.43732 -26.13940 -25.09384 -24.05557 -22.94502 -22.38267 -21.56439 -20.27064 -19.43601 -18.88864 -18.41860 -18.23011 -17.70116 -17.21799 -17.04946 -16.86301 -16.83618 -16.50278 -16.13132 -15.98922 -15.84185 -15.81185 -15.49921 -15.23918 -14.69675 -14.65169 -14.51383 -14.47478 -14.34383 -14.07104 -13.88677 -13.60587 -13.47353 -13.39116 -13.22462 -13.07908 -12.43204 -12.37998 -12.19511 -12.11650 -12.03117 -12.02758 -11.64460 -11.57635 -11.42217 -11.25219 -11.03323 -10.52781 -10.25832 -10.05536 -9.98291 -9.60714 -9.28297 -4.87589 -0.24769 -0.18426 -0.00302 0.23727 0.42643 1.35754 1.62631 1.78062 2.00894 2.06848 2.28449 2.29872 2.69150 3.02099 3.39195 3.44441 3.56178 3.58102 3.62504 3.65669 3.70689 3.76040 3.91555 4.00595 4.03759 4.07441 4.16875 4.24214 4.31340 4.36497 4.41748 4.43290 4.64352 4.65232 4.69872 4.74437 4.75500 4.81637 4.83714 4.86513 4.95411 4.95580 5.03085 5.03409 5.12644 5.17723 5.29645 5.38543 5.58269 5.60774 5.66163 6.31302 6.53802 6.54175 7.23994 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.011 3.989 2 O -0.313 6.313 3 C 0.171 3.829 4 C -0.196 4.196 5 C 0.559 3.441 6 O -0.564 6.564 7 N -0.698 5.698 8 C 0.116 3.884 9 H 0.083 0.917 10 C -0.146 4.146 11 C -0.060 4.060 12 H 0.126 0.874 13 C -0.071 4.071 14 C -0.065 4.065 15 C -0.143 4.143 16 Br -0.044 7.044 17 C 0.096 3.904 18 F -0.140 7.140 19 C -0.145 4.145 20 C -0.063 4.063 21 C -0.124 4.124 22 C -0.013 4.013 23 C -0.164 4.164 24 C -0.069 4.069 25 O -0.545 6.545 26 Si 0.756 3.244 27 C -0.045 4.045 28 C -0.214 4.214 29 H 0.075 0.925 30 H 0.071 0.929 31 H 0.106 0.894 32 H 0.413 0.587 33 H 0.094 0.906 34 H 0.068 0.932 35 H 0.150 0.850 36 H 0.162 0.838 37 H 0.171 0.829 38 H 0.095 0.905 39 H 0.100 0.900 40 H 0.155 0.845 41 H 0.133 0.867 42 H 0.386 0.614 43 H -0.306 1.306 44 H -0.282 1.282 45 H 0.154 0.846 46 H 0.160 0.840 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.989 7.976 2.610 9.292 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.083 4.083 2 O -0.225 6.225 3 C 0.122 3.878 4 C -0.200 4.200 5 C 0.348 3.652 6 O -0.443 6.443 7 N -0.351 5.351 8 C 0.010 3.990 9 H 0.101 0.899 10 C -0.185 4.185 11 C -0.078 4.078 12 H 0.144 0.856 13 C -0.072 4.072 14 C -0.085 4.085 15 C -0.223 4.223 16 Br 0.042 6.958 17 C 0.074 3.926 18 F -0.118 7.118 19 C -0.164 4.164 20 C -0.081 4.081 21 C -0.162 4.162 22 C -0.032 4.032 23 C -0.164 4.164 24 C -0.179 4.179 25 O -0.353 6.353 26 Si 0.663 3.337 27 C -0.062 4.062 28 C -0.232 4.232 29 H 0.093 0.907 30 H 0.089 0.911 31 H 0.125 0.875 32 H 0.251 0.749 33 H 0.112 0.888 34 H 0.087 0.913 35 H 0.167 0.833 36 H 0.180 0.820 37 H 0.189 0.811 38 H 0.113 0.887 39 H 0.119 0.881 40 H 0.172 0.828 41 H 0.151 0.849 42 H 0.235 0.765 43 H -0.235 1.235 44 H -0.208 1.208 45 H 0.171 0.829 46 H 0.177 0.823 Dipole moment (debyes) X Y Z Total from point charges -4.014 6.992 2.658 8.489 hybrid contribution 0.497 -0.066 -1.427 1.512 sum -3.517 6.925 1.231 7.864 Atomic orbital electron populations 1.23437 0.76607 1.05419 1.02812 1.86339 1.23126 1.26456 1.86554 1.19439 0.91461 0.85484 0.91407 1.19403 0.91029 0.94044 1.15523 1.18285 0.82632 0.88578 0.75686 1.90818 1.72492 1.30397 1.50608 1.45436 1.04835 1.09831 1.74969 1.21822 0.91652 0.87921 0.97614 0.89924 1.23626 0.96143 1.01176 0.97510 1.21683 0.88707 1.00916 0.96536 0.85645 1.19930 0.96509 0.92020 0.98770 1.21046 0.94320 0.96236 0.96891 1.22074 0.97682 0.91096 1.11434 1.96795 1.97299 1.03915 1.97821 1.17777 0.80438 0.92844 1.01497 1.91532 1.42627 1.87781 1.89898 1.21466 1.00662 0.91788 1.02458 1.21455 0.90356 1.02068 0.94263 1.23395 0.92669 1.04162 0.96001 1.21133 1.00847 0.88963 0.92237 1.20159 0.93670 0.95954 1.06654 1.25043 1.04391 0.98408 0.90017 1.86576 1.38350 1.94225 1.16178 0.94186 0.76887 0.74327 0.88347 1.21308 0.94032 0.97853 0.93049 1.21448 1.01695 0.90982 1.09074 0.90678 0.91080 0.87529 0.74851 0.88791 0.91277 0.83267 0.82046 0.81118 0.88654 0.88148 0.82757 0.84902 0.76466 1.23486 1.20836 0.82881 0.82284 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.01 -0.02 9.81 113.37 1.11 1.09 16 2 O -0.31 -2.35 8.57 -68.81 -0.59 -2.94 16 3 C 0.17 0.67 6.70 22.84 0.15 0.82 16 4 C -0.20 -0.59 5.89 -20.01 -0.12 -0.71 16 5 C 0.56 3.68 7.76 86.70 0.67 4.35 16 6 O -0.56 -8.97 14.78 16.94 0.25 -8.72 16 7 N -0.70 1.03 5.21 -443.21 -2.31 -1.28 16 8 C 0.12 -0.18 4.30 45.52 0.20 0.01 16 9 H 0.08 0.31 7.50 -2.39 -0.02 0.30 16 10 C -0.15 0.45 7.27 31.21 0.23 0.67 16 11 C -0.06 0.44 3.87 -10.92 -0.04 0.40 16 12 H 0.13 -1.41 8.09 -2.39 -0.02 -1.43 16 13 C -0.07 0.31 5.29 -19.86 -0.11 0.20 16 14 C -0.07 0.05 8.34 22.28 0.19 0.23 16 15 C -0.14 -0.52 6.23 22.35 0.14 -0.38 16 16 Br -0.04 -0.24 33.28 -20.37 -0.68 -0.92 16 17 C 0.10 0.38 7.27 22.39 0.16 0.54 16 18 F -0.14 -1.09 16.73 44.97 0.75 -0.34 16 19 C -0.14 0.26 10.03 22.31 0.22 0.49 16 20 C -0.06 0.36 9.71 22.26 0.22 0.57 16 21 C -0.12 0.85 7.29 31.12 0.23 1.08 16 22 C -0.01 0.04 9.16 22.52 0.21 0.25 16 23 C -0.16 0.81 5.35 -19.90 -0.11 0.71 16 24 C -0.07 0.44 2.79 71.24 0.20 0.64 16 25 O -0.55 1.92 12.83 -148.98 -1.91 0.01 16 26 Si 0.76 -4.69 29.87 68.60 2.05 -2.64 16 27 C -0.04 0.24 8.65 22.30 0.19 0.43 16 28 C -0.21 0.54 9.03 22.34 0.20 0.74 16 29 H 0.07 -0.43 7.66 -2.39 -0.02 -0.44 16 30 H 0.07 -0.37 7.66 -2.38 -0.02 -0.39 16 31 H 0.11 -0.32 8.14 -2.39 -0.02 -0.34 16 32 H 0.41 -3.25 6.73 -92.71 -0.62 -3.88 16 33 H 0.09 -0.26 6.34 -2.39 -0.02 -0.27 16 34 H 0.07 -0.06 8.14 -2.39 -0.02 -0.08 16 35 H 0.15 -0.38 6.68 -2.91 -0.02 -0.40 16 36 H 0.16 -0.90 8.06 -2.91 -0.02 -0.93 16 37 H 0.17 -2.03 8.05 -2.91 -0.02 -2.05 16 38 H 0.09 -0.88 8.14 -2.39 -0.02 -0.90 16 39 H 0.10 -0.64 7.71 -2.39 -0.02 -0.66 16 40 H 0.15 -1.31 6.40 -2.91 -0.02 -1.32 16 41 H 0.13 -1.19 7.96 -2.39 -0.02 -1.21 16 42 H 0.39 -3.16 8.70 -74.06 -0.64 -3.81 16 43 H -0.31 -0.76 7.11 99.48 0.71 -0.06 16 44 H -0.28 0.72 7.00 99.48 0.70 1.41 16 45 H 0.15 -1.47 4.81 -2.91 -0.01 -1.49 16 46 H 0.16 -1.14 6.30 -2.91 -0.02 -1.16 16 Total: 0.00 -25.13 403.20 1.34 -23.79 By element: Atomic # 1 Polarization: -18.93 SS G_CDS: -0.17 Total: -19.09 kcal Atomic # 6 Polarization: 8.20 SS G_CDS: 3.94 Total: 12.15 kcal Atomic # 7 Polarization: 1.03 SS G_CDS: -2.31 Total: -1.28 kcal Atomic # 8 Polarization: -9.40 SS G_CDS: -2.25 Total: -11.65 kcal Atomic # 9 Polarization: -1.09 SS G_CDS: 0.75 Total: -0.34 kcal Atomic # 14 Polarization: -4.69 SS G_CDS: 2.05 Total: -2.64 kcal Atomic # 35 Polarization: -0.24 SS G_CDS: -0.68 Total: -0.92 kcal Total: -25.13 1.34 -23.79 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9650940_12496546.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -26.313 kcal (2) G-P(sol) polarization free energy of solvation -25.127 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -51.439 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.338 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.788 kcal (6) G-S(sol) free energy of system = (1) + (5) -50.101 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.76 seconds