Wall clock time and date at job start Tue Mar 9 2021 12:54:57 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42899 * 1 3 3 Si 1.86304 * 109.46879 * 2 1 4 4 C 1.50696 * 109.47486 * 240.00233 * 2 1 3 5 5 C 1.38636 * 119.94008 * 74.99224 * 4 2 1 6 6 F 1.35101 * 119.88240 * 0.02970 * 5 4 2 7 7 C 1.38674 * 120.24090 * 180.02562 * 5 4 2 8 8 C 1.37813 * 120.11626 * 0.02895 * 7 5 4 9 9 C 1.39671 * 119.88226 * 359.97438 * 8 7 5 10 10 C 1.47723 * 120.11973 * 180.02562 * 9 8 7 11 11 O 1.21578 * 119.99670 * 179.97438 * 10 9 8 12 12 N 1.34768 * 120.00319 * 0.02562 * 10 9 8 13 13 C 1.46504 * 120.00370 * 179.97438 * 12 10 9 14 14 H 1.08997 * 112.84927 * 23.80744 * 13 12 10 15 15 C 1.53781 * 113.61188 * 155.00100 * 13 12 10 16 16 C 1.53789 * 87.07899 * 89.20466 * 15 13 12 17 17 H 1.09000 * 113.60824 * 270.79494 * 16 15 13 18 18 C 1.50696 * 113.61383 * 139.97900 * 16 15 13 19 19 C 1.38221 * 119.97271 * 300.23123 * 18 16 15 20 20 C 1.38232 * 120.04532 * 180.27663 * 19 18 16 21 21 C 1.38415 * 119.98694 * 359.74473 * 20 19 18 22 22 F 1.35089 * 120.03462 * 179.97438 * 21 20 19 23 23 C 1.38566 * 119.93438 * 0.02562 * 21 20 19 24 24 Br 1.89101 * 120.01887 * 180.02562 * 23 21 20 25 25 C 1.38259 * 119.96899 * 119.99464 * 18 16 15 26 26 C 1.53774 * 113.69002 * 252.53808 * 13 12 10 27 27 C 1.37858 * 119.93986 * 255.32415 * 4 2 1 28 28 H 0.96699 * 114.00062 * 59.99867 * 1 2 3 29 29 H 1.08997 * 109.47433 * 119.99673 * 2 1 3 30 30 H 1.48497 * 110.00097 * 298.68205 * 3 2 1 31 31 H 1.48508 * 109.99871 * 59.99920 * 3 2 1 32 32 H 1.07995 * 119.94460 * 180.02562 * 7 5 4 33 33 H 1.08004 * 120.06021 * 180.02562 * 8 7 5 34 34 H 0.97000 * 120.00106 * 0.02562 * 12 10 9 35 35 H 1.08991 * 113.61686 * 334.65442 * 15 13 12 36 36 H 1.09004 * 113.61327 * 203.74800 * 15 13 12 37 37 H 1.08001 * 119.98020 * 0.02562 * 19 18 16 38 38 H 1.08004 * 120.01365 * 179.76263 * 20 19 18 39 39 H 1.08002 * 119.99550 * 0.02562 * 25 18 16 40 40 H 1.09010 * 113.61293 * 156.32416 * 26 13 12 41 41 H 1.08999 * 113.62082 * 25.42069 * 26 13 12 42 42 H 1.07998 * 120.06175 * 359.97060 * 27 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0499 1.7565 0.0000 4 6 1.9314 -0.7103 -1.2304 5 6 1.8688 -0.0834 -2.4654 6 9 1.3578 1.1635 -2.5621 7 6 2.3289 -0.7315 -3.6017 8 6 2.8506 -2.0036 -3.5088 9 6 2.9160 -2.6400 -2.2672 10 6 3.4747 -4.0034 -2.1615 11 8 3.5310 -4.5550 -1.0795 12 7 3.9230 -4.6353 -3.2642 13 6 4.4777 -5.9872 -3.1593 14 1 4.1166 -6.5260 -2.2833 15 6 4.3800 -6.7960 -4.4636 16 6 5.7505 -6.2077 -4.8387 17 1 5.6870 -5.2623 -5.3776 18 6 6.6718 -7.1987 -5.5020 19 6 7.0400 -8.3524 -4.8357 20 6 7.8895 -9.2597 -5.4405 21 6 8.3677 -9.0156 -6.7163 22 9 9.1984 -9.9014 -7.3080 23 6 7.9944 -7.8611 -7.3855 24 35 8.6457 -7.5255 -9.1287 25 6 7.1441 -6.9555 -6.7785 26 6 6.0048 -6.0436 -3.3310 27 6 2.4461 -1.9850 -1.1270 28 1 -0.3933 0.4417 -0.7650 29 1 1.7924 -0.5138 0.8900 30 1 1.5878 2.4586 -1.2242 31 1 1.5613 2.4679 1.2086 32 1 2.2782 -0.2384 -4.5613 33 1 3.2090 -2.5074 -4.3944 34 1 3.8792 -4.1948 -4.1273 35 1 3.5715 -6.4719 -5.1188 36 1 4.3953 -7.8751 -4.3104 37 1 6.6669 -8.5431 -3.8403 38 1 8.1799 -10.1592 -4.9179 39 1 6.8530 -6.0554 -7.2995 40 1 6.4643 -6.9170 -2.8681 41 1 6.5081 -5.1121 -3.0720 42 1 2.4899 -2.4744 -0.1653 There are 65 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 65 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_9650940_12496548.mol2 42 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:54:57 Heat of formation + Delta-G solvation = -52.566868 kcal Electronic energy + Delta-G solvation = -30483.536768 eV Core-core repulsion = 25692.971970 eV Total energy + Delta-G solvation = -4790.564798 eV No. of doubly occupied orbitals = 65 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 424.027 amu Computer time = 0.65 seconds Orbital eigenvalues (eV) -50.46047 -50.06935 -41.77814 -40.86993 -39.73511 -38.67139 -37.79268 -34.81568 -33.44000 -32.85735 -32.14280 -31.46364 -30.20023 -27.05530 -26.63958 -26.37673 -24.83948 -24.07056 -23.51273 -22.62399 -21.62413 -20.19550 -19.27384 -18.91296 -18.81578 -17.96715 -17.87369 -17.61933 -17.21583 -17.11888 -16.84202 -16.56190 -16.21264 -16.03472 -15.67490 -15.56610 -15.49862 -15.02612 -14.82128 -14.68092 -14.64986 -14.35629 -14.16177 -14.00777 -13.86820 -13.70988 -13.51615 -13.31202 -13.20210 -12.94837 -12.35470 -12.34329 -12.09093 -12.00007 -11.54044 -11.44117 -11.34442 -11.20028 -11.17710 -10.85735 -10.19747 -10.10106 -10.00731 -9.80165 -9.57245 -4.97239 -0.50201 -0.17062 0.03627 0.03922 0.45761 1.19876 1.57137 1.59449 1.93505 2.02661 2.32280 2.57422 2.98678 3.05147 3.24003 3.44999 3.46970 3.51841 3.56428 3.62295 3.72119 3.74910 3.97284 3.98648 4.05935 4.12381 4.14244 4.18680 4.33394 4.54004 4.63643 4.68163 4.78546 4.81747 4.82943 4.87318 4.89457 4.91510 4.96816 5.02138 5.06938 5.10742 5.12800 5.19908 5.38653 5.59652 5.65092 5.67016 6.30704 6.46791 7.14518 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.544 6.544 2 C -0.083 4.083 3 Si 0.749 3.251 4 C -0.156 4.156 5 C 0.108 3.892 6 F -0.131 7.131 7 C -0.147 4.147 8 C -0.038 4.038 9 C -0.152 4.152 10 C 0.563 3.437 11 O -0.575 6.575 12 N -0.693 5.693 13 C 0.113 3.887 14 H 0.089 0.911 15 C -0.126 4.126 16 C -0.064 4.064 17 H 0.121 0.879 18 C -0.069 4.069 19 C -0.069 4.069 20 C -0.145 4.145 21 C 0.094 3.906 22 F -0.141 7.141 23 C -0.143 4.143 24 Br -0.043 7.043 25 C -0.061 4.061 26 C -0.142 4.142 27 C -0.021 4.021 28 H 0.384 0.616 29 H 0.130 0.870 30 H -0.253 1.253 31 H -0.308 1.308 32 H 0.171 0.829 33 H 0.176 0.824 34 H 0.417 0.583 35 H 0.091 0.909 36 H 0.105 0.895 37 H 0.164 0.836 38 H 0.158 0.842 39 H 0.158 0.842 40 H 0.102 0.898 41 H 0.072 0.928 42 H 0.139 0.861 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.659 1.049 -3.216 3.446 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.352 6.352 2 C -0.191 4.191 3 Si 0.653 3.347 4 C -0.157 4.157 5 C 0.088 3.912 6 F -0.110 7.110 7 C -0.166 4.166 8 C -0.057 4.057 9 C -0.156 4.156 10 C 0.352 3.648 11 O -0.455 6.455 12 N -0.345 5.345 13 C 0.007 3.993 14 H 0.107 0.893 15 C -0.163 4.163 16 C -0.083 4.083 17 H 0.139 0.861 18 C -0.070 4.070 19 C -0.087 4.087 20 C -0.165 4.165 21 C 0.073 3.927 22 F -0.120 7.120 23 C -0.224 4.224 24 Br 0.042 6.958 25 C -0.080 4.080 26 C -0.181 4.181 27 C -0.040 4.040 28 H 0.233 0.767 29 H 0.148 0.852 30 H -0.178 1.178 31 H -0.237 1.237 32 H 0.189 0.811 33 H 0.194 0.806 34 H 0.255 0.745 35 H 0.110 0.890 36 H 0.123 0.877 37 H 0.182 0.818 38 H 0.176 0.824 39 H 0.176 0.824 40 H 0.121 0.879 41 H 0.091 0.909 42 H 0.157 0.843 Dipole moment (debyes) X Y Z Total from point charges 0.845 1.295 -2.631 3.052 hybrid contribution -1.051 -0.122 -0.491 1.166 sum -0.206 1.173 -3.122 3.341 Atomic orbital electron populations 1.86624 1.18190 1.80262 1.50078 1.25151 0.83549 1.12057 0.98380 0.94663 0.90275 0.72822 0.76960 1.20133 1.04728 0.96370 0.94492 1.18144 0.97716 0.80345 0.94964 1.91555 1.84697 1.38290 1.96442 1.21411 1.00622 0.96018 0.98524 1.21522 0.93923 0.93303 0.96934 1.19983 1.05429 0.94899 0.95254 1.18307 0.76959 0.85503 0.84053 1.90810 1.57640 1.68076 1.28958 1.45434 1.62033 1.16672 1.10313 1.21896 0.94500 0.82810 1.00059 0.89321 1.23429 0.96663 1.01019 0.95238 1.21664 0.93652 0.97739 0.95208 0.86102 1.19945 0.97899 0.96018 0.93168 1.21354 0.94505 0.91927 1.00956 1.21424 0.99671 1.02751 0.92626 1.17788 0.93592 0.88005 0.93345 1.91525 1.69431 1.67067 1.83932 1.22130 1.06608 0.99007 0.94605 1.96799 1.87072 1.95590 1.16312 1.21172 0.93770 0.98267 0.94836 1.23595 0.95791 1.03775 0.94892 1.21026 0.92122 0.91539 0.99346 0.76748 0.85209 1.17765 1.23657 0.81132 0.80629 0.74452 0.89039 0.87669 0.81816 0.82407 0.82411 0.87944 0.90887 0.84285 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 -2.26 12.88 -148.98 -1.92 -4.18 16 2 C -0.08 -0.04 2.80 71.23 0.20 0.16 16 3 Si 0.75 -0.11 30.81 68.60 2.11 2.00 16 4 C -0.16 0.12 4.78 -19.86 -0.09 0.03 16 5 C 0.11 -0.25 6.63 22.47 0.15 -0.11 16 6 F -0.13 -0.05 12.57 44.97 0.57 0.52 16 7 C -0.15 1.11 10.01 22.27 0.22 1.33 16 8 C -0.04 0.36 9.54 22.52 0.21 0.58 16 9 C -0.15 0.46 5.87 -20.09 -0.12 0.34 16 10 C 0.56 -0.15 7.77 86.75 0.67 0.53 16 11 O -0.57 -5.17 15.94 -3.96 -0.06 -5.23 16 12 N -0.69 5.38 5.22 -443.03 -2.31 3.07 16 13 C 0.11 -0.83 4.32 45.51 0.20 -0.64 16 14 H 0.09 -0.22 7.46 -2.39 -0.02 -0.23 16 15 C -0.13 1.45 7.29 31.12 0.23 1.67 16 16 C -0.06 0.74 3.86 -11.01 -0.04 0.70 16 17 H 0.12 -1.78 8.09 -2.39 -0.02 -1.80 16 18 C -0.07 0.51 5.29 -19.86 -0.11 0.40 16 19 C -0.07 0.49 8.59 22.26 0.19 0.68 16 20 C -0.15 0.44 10.03 22.31 0.22 0.66 16 21 C 0.09 0.22 7.27 22.39 0.16 0.38 16 22 F -0.14 -0.92 16.73 44.97 0.75 -0.16 16 23 C -0.14 -0.15 6.23 22.35 0.14 -0.01 16 24 Br -0.04 -0.13 33.28 -20.37 -0.68 -0.81 16 25 C -0.06 0.27 9.45 22.28 0.21 0.48 16 26 C -0.14 1.28 7.25 31.12 0.23 1.51 16 27 C -0.02 0.00 9.21 22.52 0.21 0.21 16 28 H 0.38 -0.35 8.41 -74.06 -0.62 -0.97 16 29 H 0.13 -0.16 7.77 -2.39 -0.02 -0.18 16 30 H -0.25 -0.81 5.27 99.48 0.52 -0.28 16 31 H -0.31 -2.40 7.11 99.48 0.71 -1.70 16 32 H 0.17 -2.10 8.06 -2.91 -0.02 -2.12 16 33 H 0.18 -3.10 6.40 -2.91 -0.02 -3.12 16 34 H 0.42 -6.11 6.73 -92.71 -0.62 -6.74 16 35 H 0.09 -1.19 8.14 -2.39 -0.02 -1.21 16 36 H 0.10 -1.23 7.71 -2.38 -0.02 -1.25 16 37 H 0.16 -1.94 6.67 -2.91 -0.02 -1.96 16 38 H 0.16 -0.97 8.06 -2.91 -0.02 -0.99 16 39 H 0.16 -1.30 8.05 -2.91 -0.02 -1.32 16 40 H 0.10 -1.01 6.32 -2.38 -0.02 -1.02 16 41 H 0.07 -0.52 8.14 -2.39 -0.02 -0.54 16 42 H 0.14 0.23 7.59 -2.91 -0.02 0.21 16 Total: 0.00 -22.16 379.61 1.07 -21.09 By element: Atomic # 1 Polarization: -24.94 SS G_CDS: -0.27 Total: -25.21 kcal Atomic # 6 Polarization: 6.02 SS G_CDS: 2.88 Total: 8.91 kcal Atomic # 7 Polarization: 5.38 SS G_CDS: -2.31 Total: 3.07 kcal Atomic # 8 Polarization: -7.43 SS G_CDS: -1.98 Total: -9.41 kcal Atomic # 9 Polarization: -0.97 SS G_CDS: 1.32 Total: 0.35 kcal Atomic # 14 Polarization: -0.11 SS G_CDS: 2.11 Total: 2.00 kcal Atomic # 35 Polarization: -0.13 SS G_CDS: -0.68 Total: -0.81 kcal Total: -22.16 1.07 -21.09 kcal The number of atoms in the molecule is 42 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9650940_12496548.mol2 42 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -31.472 kcal (2) G-P(sol) polarization free energy of solvation -22.165 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -53.637 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.070 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.095 kcal (6) G-S(sol) free energy of system = (1) + (5) -52.567 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.65 seconds