Wall clock time and date at job start Tue Mar 9 2021 12:55:26 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42903 * 1 3 3 Si 1.86293 * 109.47041 * 2 1 4 4 C 1.50707 * 109.46442 * 119.99698 * 2 1 3 5 5 C 1.38893 * 119.67399 * 244.72438 * 4 2 1 6 6 C 1.36476 * 120.61476 * 179.74213 * 5 4 2 7 7 C 1.40057 * 119.82855 * 0.55489 * 6 5 4 8 8 C 1.41592 * 133.38316 * 179.70624 * 7 6 5 9 9 C 1.35867 * 107.72843 * 179.97438 * 8 7 6 10 10 C 1.47063 * 125.42509 * 179.97438 * 9 8 7 11 11 O 1.21643 * 120.00009 * 0.02880 * 10 9 8 12 12 N 1.34778 * 120.00004 * 180.02562 * 10 9 8 13 13 C 1.46500 * 120.00326 * 180.02562 * 12 10 9 14 14 H 1.08997 * 112.84664 * 23.80058 * 13 12 10 15 15 C 1.53779 * 113.61482 * 154.99937 * 13 12 10 16 16 C 1.53780 * 87.08263 * 89.11582 * 15 13 12 17 17 H 1.08996 * 113.61465 * 270.88303 * 16 15 13 18 18 C 1.50701 * 113.61535 * 139.97956 * 16 15 13 19 19 C 1.38210 * 119.96849 * 120.00136 * 18 16 15 20 20 C 1.38307 * 120.01339 * 179.97438 * 19 18 16 21 21 Br 1.89100 * 120.02106 * 179.97438 * 20 19 18 22 22 C 1.38523 * 119.95601 * 0.02562 * 20 19 18 23 23 F 1.35096 * 120.02865 * 179.97438 * 22 20 19 24 24 C 1.38454 * 119.93914 * 0.02562 * 22 20 19 25 25 C 1.38193 * 119.98376 * 359.72321 * 24 22 20 26 26 C 1.53776 * 113.61390 * 252.49638 * 13 12 10 27 27 N 1.38148 * 109.14673 * 0.02562 * 9 8 7 28 28 C 1.37482 * 108.78789 * 359.97438 * 27 9 8 29 29 C 1.37709 * 119.67598 * 65.00583 * 4 2 1 30 30 H 0.96700 * 114.00311 * 300.00531 * 1 2 3 31 31 H 1.08999 * 109.47293 * 239.99660 * 2 1 3 32 32 H 1.48501 * 109.99918 * 178.67685 * 3 2 1 33 33 H 1.48506 * 109.99973 * 299.99283 * 3 2 1 34 34 H 1.08006 * 119.69218 * 0.02562 * 5 4 2 35 35 H 1.08001 * 120.08329 * 180.23771 * 6 5 4 36 36 H 1.08001 * 126.13875 * 359.97438 * 8 7 6 37 37 H 0.97002 * 119.99875 * 0.02562 * 12 10 9 38 38 H 1.09003 * 113.61047 * 203.66475 * 15 13 12 39 39 H 1.08996 * 113.61488 * 334.56515 * 15 13 12 40 40 H 1.08003 * 119.99582 * 359.97207 * 19 18 16 41 41 H 1.08001 * 120.00737 * 179.97438 * 24 22 20 42 42 H 1.08009 * 119.97485 * 180.29780 * 25 24 22 43 43 H 1.09007 * 113.61706 * 25.42934 * 26 13 12 44 44 H 1.08998 * 113.61669 * 156.33091 * 26 13 12 45 45 H 0.96996 * 125.59998 * 180.02562 * 27 9 8 46 46 H 1.07999 * 120.09492 * 359.94913 * 29 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9312 -0.7104 1.2306 5 6 2.6462 -0.0036 2.1890 6 6 3.1054 -0.6265 3.3131 7 6 2.8651 -1.9937 3.4994 8 6 3.2031 -2.9097 4.5249 9 6 2.7038 -4.1241 4.1759 10 6 2.8322 -5.3576 4.9663 11 8 3.4252 -5.3406 6.0282 12 7 2.2926 -6.5070 4.5141 13 6 2.4200 -7.7357 5.3017 14 1 2.5814 -7.5436 6.3624 15 6 1.3104 -8.7634 5.0235 16 6 2.2135 -9.3201 3.9103 17 1 2.0623 -8.8391 2.9440 18 6 2.2077 -10.8246 3.8240 19 6 1.7953 -11.4478 2.6613 20 6 1.7901 -12.8285 2.5809 21 35 1.2253 -13.6815 0.9905 22 6 2.1979 -13.5862 3.6665 23 9 2.1928 -14.9350 3.5897 24 6 2.6095 -12.9600 4.8307 25 6 2.6187 -11.5801 4.9065 26 6 3.4043 -8.7531 4.7011 27 7 2.0574 -4.0159 2.9598 28 6 2.1446 -2.7141 2.5264 29 6 1.6818 -2.0552 1.3911 30 1 -0.3934 0.4418 0.7650 31 1 1.7924 -0.5139 -0.8899 32 1 3.5346 1.7702 0.0322 33 1 1.5616 2.4678 -1.2086 34 1 2.8365 1.0498 2.0454 35 1 3.6571 -0.0678 4.0546 36 1 3.7582 -2.6836 5.4233 37 1 1.8200 -6.5206 3.6672 38 1 1.1471 -9.4624 5.8439 39 1 0.3861 -8.3190 4.6546 40 1 1.4771 -10.8566 1.8154 41 1 2.9272 -13.5496 5.6779 42 1 2.9444 -11.0917 5.8131 43 1 4.1705 -8.3003 4.0717 44 1 3.8136 -9.4492 5.4332 45 1 1.6143 -4.7393 2.4895 46 1 1.1281 -2.5968 0.6384 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_9650940_13158378.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:55:26 Heat of formation + Delta-G solvation = 14.403363 kcal Electronic energy + Delta-G solvation = -32680.388409 eV Core-core repulsion = 27884.765823 eV Total energy + Delta-G solvation = -4795.622586 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 445.048 amu Computer time = 0.81 seconds Orbital eigenvalues (eV) -50.10480 -42.72580 -41.58031 -40.37052 -39.09611 -38.65278 -36.86578 -34.81506 -33.45695 -33.26135 -31.98736 -31.03229 -30.40603 -30.24754 -27.26564 -26.71920 -26.01784 -24.48818 -24.10630 -23.25131 -22.62762 -22.00511 -21.31106 -20.27928 -19.58313 -18.89236 -18.42017 -17.84014 -17.68610 -17.20931 -16.93530 -16.87988 -16.60435 -16.45646 -16.14837 -15.79005 -15.58911 -15.51192 -15.17705 -15.08892 -14.78446 -14.70901 -14.62951 -14.50214 -14.37739 -14.19538 -14.09497 -13.78854 -13.47457 -13.30986 -13.14173 -12.56106 -12.51524 -12.41197 -12.15546 -12.07710 -12.05168 -11.64554 -11.61883 -11.51123 -11.40293 -11.26065 -10.95530 -10.42226 -10.27243 -10.05485 -9.62621 -9.32750 -8.82936 -4.93854 -0.37599 -0.21713 -0.01051 0.41242 0.53271 0.94016 1.35172 1.69149 1.73400 1.93308 2.03331 2.15971 2.27629 2.77720 3.00708 3.38182 3.45819 3.49042 3.59266 3.66179 3.67539 3.71307 3.74561 3.89292 4.00537 4.05094 4.06205 4.13194 4.25174 4.30071 4.45016 4.48369 4.49499 4.58856 4.63686 4.75476 4.76571 4.81410 4.82965 4.88096 4.89485 4.99063 4.99918 5.06399 5.09659 5.26370 5.35265 5.41174 5.52755 5.55333 5.58495 5.62193 5.98529 6.24216 6.42657 6.80471 6.94217 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.555 6.555 2 C -0.070 4.070 3 Si 0.775 3.225 4 C -0.090 4.090 5 C -0.146 4.146 6 C -0.058 4.058 7 C -0.135 4.135 8 C -0.117 4.117 9 C 0.011 3.989 10 C 0.590 3.410 11 O -0.557 6.557 12 N -0.696 5.696 13 C 0.113 3.887 14 H 0.096 0.904 15 C -0.124 4.124 16 C -0.066 4.066 17 H 0.115 0.885 18 C -0.070 4.070 19 C -0.063 4.063 20 C -0.143 4.143 21 Br -0.043 7.043 22 C 0.095 3.905 23 F -0.140 7.140 24 C -0.144 4.144 25 C -0.068 4.068 26 C -0.142 4.142 27 N -0.564 5.564 28 C 0.107 3.893 29 C -0.110 4.110 30 H 0.396 0.604 31 H 0.108 0.892 32 H -0.287 1.287 33 H -0.302 1.302 34 H 0.148 0.852 35 H 0.148 0.852 36 H 0.156 0.844 37 H 0.411 0.589 38 H 0.110 0.890 39 H 0.089 0.911 40 H 0.155 0.845 41 H 0.160 0.840 42 H 0.167 0.833 43 H 0.069 0.931 44 H 0.107 0.893 45 H 0.431 0.569 46 H 0.134 0.866 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.197 3.388 1.547 4.324 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.363 6.363 2 C -0.180 4.180 3 Si 0.682 3.318 4 C -0.092 4.092 5 C -0.165 4.165 6 C -0.077 4.077 7 C -0.140 4.140 8 C -0.145 4.145 9 C -0.099 4.099 10 C 0.377 3.623 11 O -0.435 6.435 12 N -0.347 5.347 13 C 0.008 3.992 14 H 0.114 0.886 15 C -0.162 4.162 16 C -0.084 4.084 17 H 0.133 0.867 18 C -0.071 4.071 19 C -0.082 4.082 20 C -0.224 4.224 21 Br 0.042 6.958 22 C 0.074 3.926 23 F -0.119 7.119 24 C -0.163 4.163 25 C -0.086 4.086 26 C -0.180 4.180 27 N -0.170 5.170 28 C -0.003 4.003 29 C -0.131 4.131 30 H 0.246 0.754 31 H 0.126 0.874 32 H -0.214 1.214 33 H -0.231 1.231 34 H 0.165 0.835 35 H 0.166 0.834 36 H 0.173 0.827 37 H 0.248 0.752 38 H 0.128 0.872 39 H 0.108 0.892 40 H 0.173 0.827 41 H 0.178 0.822 42 H 0.184 0.816 43 H 0.088 0.912 44 H 0.125 0.875 45 H 0.272 0.728 46 H 0.152 0.848 Dipole moment (debyes) X Y Z Total from point charges -1.497 3.086 0.719 3.504 hybrid contribution -0.082 -1.468 -0.707 1.631 sum -1.578 1.618 0.012 2.260 Atomic orbital electron populations 1.86470 1.17109 1.82155 1.50567 1.25146 0.85316 1.10641 0.96940 0.93621 0.77954 0.75552 0.84708 1.20155 0.98593 0.93621 0.96819 1.20685 1.00972 1.00333 0.94480 1.20645 0.97614 0.91759 0.97645 1.18448 1.04311 0.95135 0.96068 1.21111 1.02564 0.90623 1.00162 1.19979 1.05120 0.95569 0.89258 1.17238 0.78417 0.82369 0.84305 1.90865 1.43540 1.85598 1.23465 1.45434 1.56566 1.07678 1.24978 1.21957 0.98064 0.82801 0.96381 0.88619 1.23430 0.97100 0.96840 0.98798 1.21645 0.97543 0.89100 1.00131 0.86680 1.19910 0.98184 0.96303 0.92694 1.21144 0.97049 0.90625 0.99409 1.22124 1.10297 0.96595 0.93344 1.96800 1.89108 1.80134 1.29720 1.17789 1.02395 0.76967 0.95457 1.91530 1.94173 1.29448 1.96716 1.21437 1.01782 0.96448 0.96637 1.21366 0.95647 0.91924 0.99687 1.23611 0.96508 0.97942 0.99981 1.41772 1.48381 1.09044 1.17808 1.18429 1.00817 0.84456 0.96631 1.19997 1.02905 0.94169 0.96028 0.75413 0.87412 1.21390 1.23072 0.83488 0.83412 0.82662 0.75197 0.87182 0.89244 0.82720 0.82205 0.81592 0.91229 0.87456 0.72808 0.84800 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 0.99 12.83 -148.98 -1.91 -0.92 16 2 C -0.07 0.17 2.79 71.24 0.20 0.37 16 3 Si 0.77 -2.62 29.76 68.60 2.04 -0.58 16 4 C -0.09 0.15 5.36 -19.83 -0.11 0.04 16 5 C -0.15 0.39 8.59 22.01 0.19 0.57 16 6 C -0.06 0.06 10.06 22.30 0.22 0.28 16 7 C -0.14 -0.28 6.16 -21.36 -0.13 -0.42 16 8 C -0.12 -0.37 10.53 22.55 0.24 -0.13 16 9 C 0.01 0.01 6.97 39.91 0.28 0.29 16 10 C 0.59 1.03 7.80 86.56 0.68 1.71 16 11 O -0.56 -5.56 16.44 -4.17 -0.07 -5.63 16 12 N -0.70 4.19 5.26 -443.66 -2.33 1.86 16 13 C 0.11 -0.75 4.32 45.52 0.20 -0.55 16 14 H 0.10 -0.25 7.46 -2.39 -0.02 -0.26 16 15 C -0.12 1.34 7.29 31.12 0.23 1.56 16 16 C -0.07 0.68 3.86 -11.01 -0.04 0.64 16 17 H 0.12 -1.47 8.09 -2.39 -0.02 -1.49 16 18 C -0.07 0.46 5.29 -19.87 -0.11 0.35 16 19 C -0.06 0.21 9.45 22.28 0.21 0.42 16 20 C -0.14 -0.26 6.23 22.35 0.14 -0.12 16 21 Br -0.04 -0.16 33.28 -20.37 -0.68 -0.84 16 22 C 0.10 0.26 7.27 22.39 0.16 0.42 16 23 F -0.14 -0.95 16.73 44.97 0.75 -0.20 16 24 C -0.14 0.40 10.03 22.31 0.22 0.62 16 25 C -0.07 0.46 8.62 22.26 0.19 0.65 16 26 C -0.14 1.15 7.25 31.12 0.23 1.37 16 27 N -0.56 2.03 6.07 -177.18 -1.08 0.96 16 28 C 0.11 0.03 7.25 39.13 0.28 0.31 16 29 C -0.11 0.10 9.69 22.37 0.22 0.31 16 30 H 0.40 -3.78 8.70 -74.06 -0.64 -4.43 16 31 H 0.11 -0.16 7.96 -2.39 -0.02 -0.18 16 32 H -0.29 -0.48 7.11 99.48 0.71 0.23 16 33 H -0.30 -1.35 7.11 99.48 0.71 -0.65 16 34 H 0.15 -1.04 4.85 -2.91 -0.01 -1.06 16 35 H 0.15 -0.73 8.06 -2.91 -0.02 -0.76 16 36 H 0.16 0.43 8.06 -2.91 -0.02 0.40 16 37 H 0.41 -4.95 7.76 -92.71 -0.72 -5.67 16 38 H 0.11 -1.27 7.73 -2.39 -0.02 -1.29 16 39 H 0.09 -1.06 8.14 -2.39 -0.02 -1.08 16 40 H 0.16 -1.04 8.05 -2.91 -0.02 -1.06 16 41 H 0.16 -0.98 8.06 -2.91 -0.02 -1.01 16 42 H 0.17 -1.97 6.64 -2.91 -0.02 -1.99 16 43 H 0.07 -0.38 8.14 -2.38 -0.02 -0.40 16 44 H 0.11 -1.02 6.30 -2.39 -0.02 -1.04 16 45 H 0.43 -4.52 8.12 -92.71 -0.75 -5.28 16 46 H 0.13 -0.40 8.06 -2.91 -0.02 -0.42 16 Total: 0.00 -23.31 409.55 -0.76 -24.07 By element: Atomic # 1 Polarization: -26.45 SS G_CDS: -0.98 Total: -27.43 kcal Atomic # 6 Polarization: 5.21 SS G_CDS: 3.50 Total: 8.71 kcal Atomic # 7 Polarization: 6.23 SS G_CDS: -3.41 Total: 2.82 kcal Atomic # 8 Polarization: -4.57 SS G_CDS: -1.98 Total: -6.55 kcal Atomic # 9 Polarization: -0.95 SS G_CDS: 0.75 Total: -0.20 kcal Atomic # 14 Polarization: -2.62 SS G_CDS: 2.04 Total: -0.58 kcal Atomic # 35 Polarization: -0.16 SS G_CDS: -0.68 Total: -0.84 kcal Total: -23.31 -0.76 -24.07 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9650940_13158378.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 38.476 kcal (2) G-P(sol) polarization free energy of solvation -23.314 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 15.161 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.758 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -24.072 kcal (6) G-S(sol) free energy of system = (1) + (5) 14.403 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.81 seconds