Wall clock time and date at job start Tue Mar 9 2021 12:55:43 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42895 * 1 3 3 Si 1.86295 * 109.47056 * 2 1 4 4 C 1.50697 * 109.47443 * 120.00447 * 2 1 3 5 5 C 1.38558 * 120.32228 * 245.02531 * 4 2 1 6 6 N 1.31528 * 120.89897 * 179.71667 * 5 4 2 7 7 C 1.32712 * 121.64252 * 0.52456 * 6 5 4 8 8 C 1.48170 * 119.72105 * 179.75207 * 7 6 5 9 9 O 1.21513 * 120.00404 * 179.72873 * 8 7 6 10 10 N 1.34782 * 120.00170 * 359.72163 * 8 7 6 11 11 C 1.46496 * 120.00349 * 179.97438 * 10 8 7 12 12 H 1.09003 * 112.84646 * 23.80899 * 11 10 8 13 13 C 1.53784 * 113.61554 * 155.00078 * 11 10 8 14 14 C 1.53781 * 87.07665 * 89.20301 * 13 11 10 15 15 H 1.08994 * 113.61489 * 270.79500 * 14 13 11 16 16 C 1.50704 * 113.61170 * 139.97966 * 14 13 11 17 17 C 1.38221 * 119.97359 * 301.50943 * 16 14 13 18 18 C 1.38231 * 120.04453 * 179.97438 * 17 16 14 19 19 C 1.38412 * 119.98316 * 0.04638 * 18 17 16 20 20 F 1.35102 * 120.02809 * 180.02562 * 19 18 17 21 21 C 1.38567 * 119.94182 * 359.94833 * 19 18 17 22 22 Br 1.89096 * 120.01933 * 180.30265 * 21 19 18 23 23 C 1.38255 * 119.95473 * 0.02914 * 21 19 18 24 24 C 1.53778 * 87.17393 * 25.39160 * 14 13 11 25 25 C 1.39307 * 120.55529 * 359.47369 * 7 6 5 26 26 C 1.38586 * 119.05948 * 0.25678 * 25 7 6 27 27 H 0.96701 * 114.00364 * 59.99958 * 1 2 3 28 28 H 1.09008 * 109.46774 * 240.00366 * 2 1 3 29 29 H 1.48496 * 110.00552 * 298.68267 * 3 2 1 30 30 H 1.48507 * 109.99971 * 60.00485 * 3 2 1 31 31 H 1.07999 * 119.54994 * 359.97279 * 5 4 2 32 32 H 0.97002 * 119.99471 * 0.02562 * 10 8 7 33 33 H 1.08993 * 113.61413 * 334.65644 * 13 11 10 34 34 H 1.08997 * 113.68711 * 203.76129 * 13 11 10 35 35 H 1.07999 * 119.97665 * 0.02562 * 17 16 14 36 36 H 1.07999 * 120.00893 * 179.97438 * 18 17 16 37 37 H 1.08004 * 119.98581 * 179.97438 * 23 21 19 38 38 H 1.09006 * 113.61399 * 89.15700 * 24 14 13 39 39 H 1.08998 * 113.61353 * 220.05802 * 24 14 13 40 40 H 1.08003 * 120.46670 * 180.22923 * 25 7 6 41 41 H 1.08001 * 120.75730 * 180.02562 * 26 25 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4289 0.0000 0.0000 3 14 2.0499 1.7564 0.0000 4 6 1.9314 -0.7105 1.2304 5 6 2.6407 -0.0172 2.1979 6 7 3.0796 -0.6247 3.2787 7 6 2.8725 -1.9197 3.4822 8 6 3.3908 -2.5621 4.7126 9 8 3.1998 -3.7463 4.9065 10 7 4.0743 -1.8329 5.6169 11 6 4.5863 -2.4679 6.8338 12 1 4.7282 -3.5429 6.7227 13 6 5.8007 -1.7459 7.4412 14 6 4.7975 -0.9002 8.2432 15 1 4.4745 0.0024 7.7247 16 6 5.2292 -0.6368 9.6629 17 6 5.4754 -1.6949 10.5174 18 6 5.8720 -1.4549 11.8197 19 6 6.0217 -0.1543 12.2687 20 9 6.4098 0.0813 13.5411 21 6 5.7749 0.9060 11.4114 22 35 5.9870 2.6838 12.0199 23 6 5.3788 0.6632 10.1092 24 6 3.8143 -2.0747 8.1063 25 6 2.1668 -2.6788 2.5514 26 6 1.6878 -2.0639 1.4055 27 1 -0.3934 0.4417 -0.7650 28 1 1.7922 -0.5138 -0.8901 29 1 1.5878 2.4586 -1.2241 30 1 1.5615 2.4678 1.2086 31 1 2.8321 1.0373 2.0646 32 1 4.2266 -0.8875 5.4623 33 1 6.3746 -1.1703 6.7151 34 1 6.4259 -2.3873 8.0623 35 1 5.3586 -2.7098 10.1672 36 1 6.0638 -2.2821 12.4871 37 1 5.1858 1.4892 9.4408 38 1 3.8945 -2.8072 8.9096 39 1 2.7869 -1.7641 7.9164 40 1 1.9959 -3.7318 2.7202 41 1 1.1370 -2.6262 0.6660 There are 62 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 62 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_9650940_13287726.mol2 41 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:55:43 Heat of formation + Delta-G solvation = -9.403308 kcal Electronic energy + Delta-G solvation = -28066.404324 eV Core-core repulsion = 23681.739303 eV Total energy + Delta-G solvation = -4384.665021 eV No. of doubly occupied orbitals = 62 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 407.032 amu Computer time = 1.34 seconds Orbital eigenvalues (eV) -49.96796 -42.00690 -41.38843 -40.11679 -38.78765 -38.04719 -34.83689 -33.83350 -33.36544 -33.02594 -31.84086 -30.25632 -28.06987 -26.87355 -26.17811 -25.04606 -24.23899 -23.88843 -22.69009 -21.94894 -20.26321 -19.37885 -18.84082 -18.78627 -18.18019 -17.68469 -17.24242 -16.98343 -16.75339 -16.64479 -16.24892 -16.18702 -15.66519 -15.57740 -15.48585 -14.92780 -14.78775 -14.70980 -14.34527 -14.30142 -14.19626 -14.08763 -14.03958 -13.83552 -13.59755 -13.30514 -12.62803 -12.46043 -12.17648 -12.15306 -12.12284 -11.65595 -11.51451 -11.34999 -11.25221 -11.09374 -10.83686 -10.60749 -10.33773 -10.08968 -10.06275 -9.61236 -5.15229 -0.58435 -0.21924 -0.04620 0.05559 0.47674 1.03851 1.41513 1.58948 1.77682 1.91904 2.23229 2.62530 2.89022 3.01602 3.12199 3.27802 3.38593 3.50797 3.52729 3.58264 3.63227 3.70887 3.77180 3.84729 3.90738 3.94257 4.06429 4.14717 4.19200 4.41602 4.48646 4.51873 4.56308 4.67629 4.72840 4.77136 4.78076 4.84377 4.88578 4.94836 4.96840 5.00456 5.27435 5.33894 5.49334 5.56764 6.20401 6.29399 6.60209 7.10209 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.534 6.534 2 C -0.076 4.076 3 Si 0.683 3.317 4 C -0.101 4.101 5 C 0.106 3.894 6 N -0.452 5.452 7 C 0.079 3.921 8 C 0.577 3.423 9 O -0.526 6.526 10 N -0.694 5.694 11 C 0.118 3.882 12 H 0.109 0.891 13 C -0.135 4.135 14 C -0.074 4.074 15 H 0.104 0.896 16 C -0.075 4.075 17 C -0.073 4.073 18 C -0.143 4.143 19 C 0.123 3.877 20 F -0.124 7.124 21 C -0.129 4.129 22 Br -0.027 7.027 23 C -0.059 4.059 24 C -0.144 4.144 25 C -0.107 4.107 26 C -0.052 4.052 27 H 0.385 0.615 28 H 0.084 0.916 29 H -0.255 1.255 30 H -0.249 1.249 31 H 0.165 0.835 32 H 0.413 0.587 33 H 0.081 0.919 34 H 0.101 0.899 35 H 0.142 0.858 36 H 0.146 0.854 37 H 0.142 0.858 38 H 0.097 0.903 39 H 0.078 0.922 40 H 0.153 0.847 41 H 0.147 0.853 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.392 0.401 -5.745 5.925 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.342 6.342 2 C -0.186 4.186 3 Si 0.583 3.417 4 C -0.104 4.104 5 C -0.054 4.054 6 N -0.163 5.163 7 C -0.059 4.059 8 C 0.362 3.638 9 O -0.401 6.401 10 N -0.346 5.346 11 C 0.012 3.988 12 H 0.127 0.873 13 C -0.173 4.173 14 C -0.092 4.092 15 H 0.122 0.878 16 C -0.076 4.076 17 C -0.091 4.091 18 C -0.163 4.163 19 C 0.101 3.899 20 F -0.102 7.102 21 C -0.210 4.210 22 Br 0.058 6.942 23 C -0.079 4.079 24 C -0.182 4.182 25 C -0.128 4.128 26 C -0.078 4.078 27 H 0.233 0.767 28 H 0.102 0.898 29 H -0.180 1.180 30 H -0.174 1.174 31 H 0.182 0.818 32 H 0.250 0.750 33 H 0.100 0.900 34 H 0.119 0.881 35 H 0.159 0.841 36 H 0.164 0.836 37 H 0.160 0.840 38 H 0.116 0.884 39 H 0.097 0.903 40 H 0.171 0.829 41 H 0.164 0.836 Dipole moment (debyes) X Y Z Total from point charges 1.711 1.202 -4.092 4.595 hybrid contribution -1.553 -0.360 -1.108 1.941 sum 0.157 0.842 -5.199 5.269 Atomic orbital electron populations 1.86580 1.17253 1.80299 1.50104 1.24732 0.84928 1.11364 0.97595 0.95065 0.91391 0.74159 0.81053 1.20528 0.98468 0.94942 0.96426 1.22599 0.94466 0.99881 0.88442 1.67526 1.18383 1.09412 1.21014 1.21118 0.98773 0.90307 0.95730 1.17831 0.77973 0.85886 0.82073 1.90820 1.57490 1.14834 1.76978 1.45485 1.55277 1.13826 1.19965 1.21931 0.94342 0.98977 0.83512 0.87277 1.23443 0.96081 0.98662 0.99094 1.21637 0.97412 0.98851 0.91313 0.87827 1.19760 0.99616 0.92230 0.95998 1.21041 0.96128 0.99897 0.92051 1.21189 1.02634 0.94854 0.97591 1.17436 0.99688 0.93124 0.79641 1.91578 1.88003 1.95170 1.35466 1.21997 1.10331 0.91489 0.97137 1.96825 1.96511 1.11641 1.89194 1.20957 0.96456 0.97599 0.92861 1.23621 0.99264 0.97417 0.97934 1.22205 0.95268 1.02338 0.92960 1.21541 0.95623 0.93818 0.96850 0.76685 0.89800 1.18005 1.17386 0.81850 0.75049 0.89994 0.88073 0.84069 0.83592 0.83986 0.88420 0.90349 0.82906 0.83566 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 35. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 0.41 12.82 -35.23 -0.45 -0.04 16 2 C -0.08 0.17 2.81 36.00 0.10 0.27 16 3 Si 0.68 -1.99 29.87 -169.99 -5.08 -7.07 16 4 C -0.10 0.06 5.40 -104.36 -0.56 -0.51 16 5 C 0.11 -0.04 9.84 -17.56 -0.17 -0.22 16 6 N -0.45 -0.35 9.54 -9.80 -0.09 -0.44 16 7 C 0.08 0.12 6.75 -83.01 -0.56 -0.44 16 8 C 0.58 1.27 7.81 -12.18 -0.10 1.17 16 9 O -0.53 -2.65 15.92 5.35 0.09 -2.57 16 10 N -0.69 0.31 5.25 -53.77 -0.28 0.03 16 11 C 0.12 -0.18 4.33 -67.03 -0.29 -0.47 16 12 H 0.11 -0.03 7.46 -51.93 -0.39 -0.42 16 13 C -0.13 0.43 7.29 -25.92 -0.19 0.24 16 14 C -0.07 0.21 3.85 -90.96 -0.35 -0.14 16 15 H 0.10 -0.35 8.08 -51.93 -0.42 -0.77 16 16 C -0.07 0.12 5.29 -104.62 -0.55 -0.43 16 17 C -0.07 0.14 8.53 -39.59 -0.34 -0.20 16 18 C -0.14 0.08 10.03 -39.52 -0.40 -0.31 16 19 C 0.12 0.20 7.27 -39.40 -0.29 -0.09 16 20 F -0.12 -0.39 16.73 2.25 0.04 -0.35 16 21 C -0.13 -0.17 6.23 -39.45 -0.25 -0.42 16 22 Br -0.03 -0.05 33.28 -68.01 -2.26 -2.32 16 23 C -0.06 0.03 9.45 -39.57 -0.37 -0.35 16 24 C -0.14 0.31 7.27 -25.83 -0.19 0.12 16 25 C -0.11 -0.08 9.63 -39.06 -0.38 -0.46 16 26 C -0.05 0.02 9.83 -39.31 -0.39 -0.37 16 27 H 0.38 -1.79 8.74 45.56 0.40 -1.39 16 28 H 0.08 -0.34 7.96 -51.92 -0.41 -0.76 16 29 H -0.26 0.19 7.11 56.52 0.40 0.59 16 30 H -0.25 -0.01 7.05 56.52 0.40 0.39 16 31 H 0.16 -0.42 4.88 -52.49 -0.26 -0.68 16 32 H 0.41 -0.73 8.03 -40.82 -0.33 -1.06 16 33 H 0.08 -0.27 8.14 -51.93 -0.42 -0.70 16 34 H 0.10 -0.38 7.64 -51.93 -0.40 -0.78 16 35 H 0.14 -0.57 6.72 -52.49 -0.35 -0.92 16 36 H 0.15 -0.33 8.06 -52.49 -0.42 -0.75 16 37 H 0.14 -0.27 8.05 -52.48 -0.42 -0.69 16 38 H 0.10 -0.29 6.39 -51.93 -0.33 -0.62 16 39 H 0.08 -0.08 8.14 -51.93 -0.42 -0.50 16 40 H 0.15 0.03 7.64 -52.48 -0.40 -0.37 16 41 H 0.15 -0.29 8.06 -52.49 -0.42 -0.72 16 LS Contribution 373.20 15.07 5.62 5.62 Total: 0.00 -7.97 373.20 -11.89 -19.86 By element: Atomic # 1 Polarization: -5.93 SS G_CDS: -4.20 Total: -10.13 kcal Atomic # 6 Polarization: 2.67 SS G_CDS: -5.26 Total: -2.59 kcal Atomic # 7 Polarization: -0.04 SS G_CDS: -0.38 Total: -0.41 kcal Atomic # 8 Polarization: -2.24 SS G_CDS: -0.37 Total: -2.61 kcal Atomic # 9 Polarization: -0.39 SS G_CDS: 0.04 Total: -0.35 kcal Atomic # 14 Polarization: -1.99 SS G_CDS: -5.08 Total: -7.07 kcal Atomic # 35 Polarization: -0.05 SS G_CDS: -2.26 Total: -2.32 kcal Total LS contribution 5.62 Total: 5.62 kcal Total: -7.97 -11.89 -19.86 kcal The number of atoms in the molecule is 41 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9650940_13287726.mol2 41 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 10.456 kcal (2) G-P(sol) polarization free energy of solvation -7.969 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 2.486 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.889 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.859 kcal (6) G-S(sol) free energy of system = (1) + (5) -9.403 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.34 seconds