Wall clock time and date at job start Tue Mar 9 2021 12:55:47 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46505 * 1 3 3 C 1.34657 * 124.84831 * 2 1 4 4 C 1.36775 * 108.39367 * 180.24467 * 3 2 1 5 5 C 1.47262 * 126.94171 * 179.78784 * 4 3 2 6 6 O 1.21625 * 119.99784 * 179.97438 * 5 4 3 7 7 N 1.34779 * 120.00082 * 359.97438 * 5 4 3 8 8 C 1.46494 * 119.99751 * 179.97438 * 7 5 4 9 9 H 1.08998 * 112.85172 * 336.19071 * 8 7 5 10 10 C 1.53780 * 113.61564 * 107.50120 * 8 7 5 11 11 C 1.53782 * 87.08214 * 89.11351 * 10 8 7 12 12 H 1.09001 * 113.61726 * 270.88545 * 11 10 8 13 13 C 1.50703 * 113.69209 * 139.99367 * 11 10 8 14 14 C 1.38223 * 119.97057 * 142.46530 * 13 11 10 15 15 C 1.38296 * 120.01190 * 180.02562 * 14 13 11 16 16 Br 1.89104 * 120.01643 * 180.02562 * 15 14 13 17 17 C 1.38525 * 119.96035 * 359.97408 * 15 14 13 18 18 F 1.35092 * 120.03046 * 179.97438 * 17 15 14 19 19 C 1.38449 * 119.93650 * 0.02562 * 17 15 14 20 20 C 1.38189 * 119.98976 * 359.76444 * 19 17 15 21 21 C 1.53784 * 87.08171 * 25.43194 * 11 10 8 22 22 C 1.46682 * 106.11416 * 359.76840 * 4 3 2 23 23 C 1.34493 * 106.33635 * 0.02562 * 22 4 3 24 24 C 1.50699 * 125.57399 * 179.97438 * 23 22 4 25 25 O 1.42892 * 109.47249 * 150.02391 * 24 23 22 26 26 Si 1.86298 * 109.47032 * 30.01777 * 24 23 22 27 27 H 1.08999 * 109.47056 * 270.15775 * 1 2 3 28 28 H 1.09004 * 109.47129 * 30.15738 * 1 2 3 29 29 H 1.09000 * 109.46926 * 150.15940 * 1 2 3 30 30 H 1.07994 * 125.80493 * 359.97438 * 3 2 1 31 31 H 0.97001 * 119.99530 * 359.97438 * 7 5 4 32 32 H 1.09001 * 113.61691 * 203.66138 * 10 8 7 33 33 H 1.09000 * 113.61744 * 334.56653 * 10 8 7 34 34 H 1.07998 * 119.98733 * 359.97438 * 14 13 11 35 35 H 1.08001 * 120.00527 * 179.97438 * 19 17 15 36 36 H 1.08005 * 119.98450 * 180.25844 * 20 19 17 37 37 H 1.08998 * 113.61669 * 220.01860 * 21 11 10 38 38 H 1.09002 * 113.61111 * 89.11832 * 21 11 10 39 39 H 1.08002 * 126.83323 * 180.02562 * 22 4 3 40 40 H 1.09004 * 109.46453 * 270.02460 * 24 23 22 41 41 H 0.96703 * 114.00176 * 299.99748 * 25 24 23 42 42 H 1.48506 * 109.99834 * 58.68765 * 26 24 23 43 43 H 1.48502 * 110.00011 * 180.02562 * 26 24 23 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4651 0.0000 0.0000 3 6 2.2345 1.1051 0.0000 4 6 3.5462 0.7177 -0.0055 5 6 4.7284 1.5958 -0.0119 6 8 5.8446 1.1128 -0.0160 7 7 4.5734 2.9346 -0.0132 8 6 5.7494 3.8081 -0.0190 9 1 6.6387 3.3233 0.3838 10 6 5.9862 4.5136 -1.3647 11 6 5.0835 5.6434 -0.8417 12 1 4.0264 5.4953 -1.0623 13 6 5.5691 7.0233 -1.2039 14 6 4.6599 8.0108 -1.5338 15 6 5.1046 9.2772 -1.8669 16 35 3.8608 10.6285 -2.3176 17 6 6.4616 9.5556 -1.8691 18 9 6.8975 10.7921 -2.1947 19 6 7.3706 8.5651 -1.5383 20 6 6.9234 7.3017 -1.2016 21 6 5.4848 5.2014 0.5756 22 6 3.5375 -0.7491 -0.0034 23 6 2.2447 -1.1198 0.0026 24 6 1.7397 -2.5396 0.0062 25 8 0.4835 -2.5967 0.6848 26 14 2.9684 -3.6334 0.8807 27 1 -0.3633 0.0028 1.0276 28 1 -0.3633 0.8886 -0.5163 29 1 -0.3633 -0.8914 -0.5114 30 1 1.8767 2.1240 -0.0004 31 1 3.6831 3.3197 -0.0103 32 1 7.0208 4.8187 -1.5217 33 1 5.5673 3.9794 -2.2175 34 1 3.6021 7.7929 -1.5323 35 1 8.4288 8.7808 -1.5400 36 1 7.6324 6.5302 -0.9395 37 1 4.6611 5.2224 1.2891 38 1 6.3823 5.6945 0.9490 39 1 4.3981 -1.4017 -0.0061 40 1 1.6140 -2.8830 -1.0207 41 1 0.5204 -2.3047 1.6059 42 1 3.1727 -3.1565 2.2722 43 1 2.4823 -5.0366 0.8905 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_9650940_13287730.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:55:47 Heat of formation + Delta-G solvation = 2.890008 kcal Electronic energy + Delta-G solvation = -28867.363825 eV Core-core repulsion = 24455.920404 eV Total energy + Delta-G solvation = -4411.443421 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 409.048 amu Computer time = 0.61 seconds Orbital eigenvalues (eV) -50.07346 -42.44043 -41.44492 -40.06939 -38.60421 -37.85926 -34.57591 -33.69846 -33.36986 -31.97841 -31.17768 -30.20323 -27.66573 -26.62524 -26.49484 -25.79658 -24.14917 -23.77811 -22.51369 -21.03893 -20.62336 -20.05662 -19.08958 -18.82810 -17.66360 -17.43383 -17.36342 -16.84672 -16.78370 -16.65369 -16.57219 -15.85243 -15.54818 -15.45878 -15.34685 -15.27323 -14.70762 -14.66543 -14.45502 -14.32279 -14.14899 -14.06041 -13.73549 -13.40302 -13.38677 -13.25058 -13.17161 -13.04257 -12.40925 -12.34652 -12.07980 -12.01873 -11.96332 -11.52854 -11.43773 -11.17252 -10.97316 -10.93649 -10.04948 -10.01012 -9.58910 -9.53162 -9.18045 -4.88844 -0.17695 0.03102 0.44547 0.77239 1.05345 1.47216 1.63614 1.81865 2.07302 2.29841 2.31846 2.59138 3.04315 3.22144 3.48141 3.52317 3.59340 3.72464 3.76681 3.89551 3.97081 4.01097 4.05796 4.13780 4.18349 4.32113 4.42193 4.48815 4.54239 4.54525 4.69942 4.78712 4.81250 4.83398 4.86947 4.89250 4.95704 5.00076 5.04739 5.07146 5.13042 5.23913 5.42451 5.65665 5.66520 5.73796 5.99100 6.25211 6.36341 6.69441 7.40044 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.062 3.938 2 N -0.427 5.427 3 C 0.071 3.929 4 C -0.261 4.261 5 C 0.591 3.409 6 O -0.591 6.591 7 N -0.699 5.699 8 C 0.115 3.885 9 H 0.085 0.915 10 C -0.142 4.142 11 C -0.063 4.063 12 H 0.118 0.882 13 C -0.069 4.069 14 C -0.061 4.061 15 C -0.143 4.143 16 Br -0.043 7.043 17 C 0.095 3.905 18 F -0.140 7.140 19 C -0.145 4.145 20 C -0.069 4.069 21 C -0.124 4.124 22 C -0.156 4.156 23 C -0.024 4.024 24 C -0.043 4.043 25 O -0.541 6.541 26 Si 0.771 3.229 27 H 0.086 0.914 28 H 0.104 0.896 29 H 0.092 0.908 30 H 0.208 0.792 31 H 0.413 0.587 32 H 0.102 0.898 33 H 0.068 0.932 34 H 0.157 0.843 35 H 0.159 0.841 36 H 0.164 0.836 37 H 0.089 0.911 38 H 0.105 0.895 39 H 0.154 0.846 40 H 0.132 0.868 41 H 0.386 0.614 42 H -0.295 1.295 43 H -0.290 1.290 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.534 -0.780 0.908 4.690 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.078 4.078 2 N -0.101 5.101 3 C -0.066 4.066 4 C -0.271 4.271 5 C 0.381 3.619 6 O -0.473 6.473 7 N -0.351 5.351 8 C 0.009 3.991 9 H 0.103 0.897 10 C -0.181 4.181 11 C -0.081 4.081 12 H 0.136 0.864 13 C -0.070 4.070 14 C -0.081 4.081 15 C -0.223 4.223 16 Br 0.043 6.957 17 C 0.073 3.927 18 F -0.119 7.119 19 C -0.164 4.164 20 C -0.087 4.087 21 C -0.162 4.162 22 C -0.180 4.180 23 C -0.133 4.133 24 C -0.153 4.153 25 O -0.348 6.348 26 Si 0.676 3.324 27 H 0.105 0.895 28 H 0.122 0.878 29 H 0.111 0.889 30 H 0.225 0.775 31 H 0.250 0.750 32 H 0.120 0.880 33 H 0.087 0.913 34 H 0.175 0.825 35 H 0.177 0.823 36 H 0.181 0.819 37 H 0.108 0.892 38 H 0.123 0.877 39 H 0.171 0.829 40 H 0.150 0.850 41 H 0.235 0.765 42 H -0.222 1.222 43 H -0.217 1.217 Dipole moment (debyes) X Y Z Total from point charges -4.653 -1.345 0.814 4.912 hybrid contribution -0.683 0.834 0.607 1.237 sum -5.337 -0.511 1.421 5.546 Atomic orbital electron populations 1.22437 0.74632 1.05889 1.04820 1.43717 1.08009 1.04697 1.53713 1.22414 0.89047 0.93164 1.01970 1.20326 0.92228 0.93902 1.20612 1.17640 0.87725 0.82151 0.74352 1.90756 1.27677 1.76123 1.52705 1.45341 1.09918 1.04593 1.75202 1.21828 0.89328 0.90357 0.97580 0.89703 1.23591 1.01183 0.95923 0.97408 1.21621 1.01016 0.88565 0.96878 0.86405 1.19948 0.92919 0.95657 0.98495 1.21153 1.01797 0.89219 0.95930 1.22117 0.91993 0.96750 1.11454 1.96793 1.56345 1.50206 1.92371 1.17770 0.91730 0.81234 1.01922 1.91526 1.90069 1.40179 1.90116 1.21420 1.00683 0.92644 1.01635 1.21355 0.96060 0.95821 0.95506 1.23413 1.03780 0.93247 0.95792 1.21822 0.95528 0.93682 1.06927 1.20833 0.90505 0.89730 1.12273 1.24701 0.92634 0.94129 1.03848 1.86559 1.29547 1.88978 1.29763 0.93370 0.84480 0.74607 0.79959 0.89537 0.87774 0.88949 0.77501 0.75003 0.88003 0.91297 0.82512 0.82307 0.81864 0.89247 0.87693 0.82867 0.85024 0.76478 1.22168 1.21702 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.06 -0.59 9.81 127.77 1.25 0.66 16 2 N -0.43 1.76 3.09 -533.22 -1.65 0.12 16 3 C 0.07 -0.35 10.83 83.92 0.91 0.56 16 4 C -0.26 -0.56 6.29 -19.04 -0.12 -0.68 16 5 C 0.59 3.01 7.81 86.62 0.68 3.68 16 6 O -0.59 -8.60 16.57 -4.11 -0.07 -8.67 16 7 N -0.70 2.39 5.25 -443.46 -2.33 0.07 16 8 C 0.11 -0.44 4.32 45.52 0.20 -0.24 16 9 H 0.08 0.12 7.46 -2.39 -0.02 0.10 16 10 C -0.14 0.84 7.26 31.12 0.23 1.07 16 11 C -0.06 0.56 3.85 -11.01 -0.04 0.52 16 12 H 0.12 -1.40 8.09 -2.39 -0.02 -1.42 16 13 C -0.07 0.38 5.29 -19.86 -0.11 0.28 16 14 C -0.06 0.18 9.45 22.28 0.21 0.39 16 15 C -0.14 -0.30 6.23 22.35 0.14 -0.16 16 16 Br -0.04 -0.16 33.28 -20.37 -0.68 -0.84 16 17 C 0.09 0.31 7.27 22.39 0.16 0.47 16 18 F -0.14 -1.01 16.73 44.97 0.75 -0.26 16 19 C -0.14 0.27 10.03 22.31 0.22 0.50 16 20 C -0.07 0.38 8.60 22.26 0.19 0.57 16 21 C -0.12 1.10 7.29 31.12 0.23 1.32 16 22 C -0.16 -0.47 9.49 23.62 0.22 -0.24 16 23 C -0.02 0.02 6.13 40.98 0.25 0.27 16 24 C -0.04 0.12 2.86 71.24 0.20 0.32 16 25 O -0.54 1.50 10.33 -148.98 -1.54 -0.04 16 26 Si 0.77 -1.00 31.12 68.60 2.13 1.13 16 27 H 0.09 -0.99 8.14 -2.39 -0.02 -1.00 16 28 H 0.10 -1.41 8.13 -2.38 -0.02 -1.43 16 29 H 0.09 -0.68 6.74 -2.39 -0.02 -0.70 16 30 H 0.21 -2.87 7.45 -2.91 -0.02 -2.90 16 31 H 0.41 -4.27 7.64 -92.71 -0.71 -4.97 16 32 H 0.10 -0.72 6.33 -2.39 -0.02 -0.74 16 33 H 0.07 -0.23 8.14 -2.39 -0.02 -0.25 16 34 H 0.16 -1.05 8.05 -2.91 -0.02 -1.07 16 35 H 0.16 -0.83 8.06 -2.91 -0.02 -0.85 16 36 H 0.16 -1.64 6.68 -2.91 -0.02 -1.66 16 37 H 0.09 -0.91 8.14 -2.39 -0.02 -0.93 16 38 H 0.10 -0.98 7.71 -2.39 -0.02 -1.00 16 39 H 0.15 0.38 6.89 -2.91 -0.02 0.36 16 40 H 0.13 -0.61 7.96 -2.38 -0.02 -0.63 16 41 H 0.39 -2.77 8.70 -74.06 -0.64 -3.42 16 42 H -0.30 -1.47 7.11 99.48 0.71 -0.76 16 43 H -0.29 -1.37 7.11 99.48 0.71 -0.66 16 Total: 0.00 -24.38 383.73 1.22 -23.15 By element: Atomic # 1 Polarization: -23.72 SS G_CDS: -0.23 Total: -23.95 kcal Atomic # 6 Polarization: 4.45 SS G_CDS: 4.83 Total: 9.28 kcal Atomic # 7 Polarization: 4.16 SS G_CDS: -3.97 Total: 0.18 kcal Atomic # 8 Polarization: -7.10 SS G_CDS: -1.61 Total: -8.70 kcal Atomic # 9 Polarization: -1.01 SS G_CDS: 0.75 Total: -0.26 kcal Atomic # 14 Polarization: -1.00 SS G_CDS: 2.13 Total: 1.13 kcal Atomic # 35 Polarization: -0.16 SS G_CDS: -0.68 Total: -0.84 kcal Total: -24.38 1.22 -23.15 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9650940_13287730.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 26.042 kcal (2) G-P(sol) polarization free energy of solvation -24.377 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 1.665 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.225 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.152 kcal (6) G-S(sol) free energy of system = (1) + (5) 2.890 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.62 seconds