Wall clock time and date at job start Tue Mar 9 2021 12:56:16 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46895 * 1 3 3 C 1.46902 * 111.00252 * 2 1 4 4 C 1.39045 * 111.00040 * 123.95389 * 2 1 3 5 5 C 1.39197 * 119.93421 * 119.72035 * 4 2 1 6 6 C 1.50705 * 119.96468 * 0.02562 * 5 4 2 7 7 O 1.42901 * 109.46710 * 74.99779 * 6 5 4 8 8 Si 1.86296 * 109.46977 * 194.99964 * 6 5 4 9 9 C 1.37633 * 120.07201 * 179.76606 * 5 4 2 10 10 C 1.39775 * 119.92695 * 0.49433 * 9 5 4 11 11 C 1.47516 * 120.06824 * 179.74610 * 10 9 5 12 12 O 1.21592 * 120.00169 * 0.02562 * 11 10 9 13 13 N 1.34777 * 120.00034 * 180.02562 * 11 10 9 14 14 C 1.46505 * 120.00282 * 179.97438 * 13 11 10 15 15 H 1.09002 * 112.84338 * 23.79834 * 14 13 11 16 16 C 1.53775 * 113.61714 * 154.99516 * 14 13 11 17 17 C 1.53787 * 87.08038 * 89.11484 * 16 14 13 18 18 H 1.08998 * 113.61839 * 270.88680 * 17 16 14 19 19 C 1.50703 * 113.61369 * 140.05948 * 17 16 14 20 20 C 1.38207 * 119.97359 * 299.73629 * 19 17 16 21 21 C 1.38307 * 120.01512 * 179.72785 * 20 19 17 22 22 Br 1.89097 * 120.02256 * 180.26759 * 21 20 19 23 23 C 1.38522 * 119.95309 * 0.53774 * 21 20 19 24 24 F 1.35099 * 120.02699 * 179.75189 * 23 21 20 25 25 C 1.38449 * 119.94295 * 359.72996 * 23 21 20 26 26 C 1.38195 * 119.98314 * 359.97438 * 25 23 21 27 27 C 1.53780 * 113.61061 * 252.49548 * 14 13 11 28 28 C 1.39822 * 119.86412 * 359.75953 * 10 9 5 29 29 C 1.37591 * 119.92807 * 0.02562 * 28 10 9 30 30 H 1.09002 * 109.47411 * 296.05070 * 1 2 3 31 31 H 1.09007 * 109.47071 * 56.04643 * 1 2 3 32 32 H 1.08996 * 109.47424 * 176.04443 * 1 2 3 33 33 H 1.09000 * 109.46807 * 183.95307 * 3 2 1 34 34 H 1.08997 * 109.46913 * 303.94937 * 3 2 1 35 35 H 1.09005 * 109.47092 * 63.95447 * 3 2 1 36 36 H 1.09000 * 109.46707 * 315.00354 * 6 5 4 37 37 H 0.96700 * 113.99997 * 60.00406 * 7 6 5 38 38 H 1.48489 * 110.00368 * 58.68431 * 8 6 5 39 39 H 1.48507 * 109.99808 * 180.02562 * 8 6 5 40 40 H 1.07994 * 120.03800 * 180.23359 * 9 5 4 41 41 H 0.96998 * 120.00047 * 359.97438 * 13 11 10 42 42 H 1.08994 * 113.61509 * 203.66390 * 16 14 13 43 43 H 1.08997 * 113.61540 * 334.57180 * 16 14 13 44 44 H 1.07999 * 119.99479 * 359.97438 * 20 19 17 45 45 H 1.07996 * 120.01103 * 180.02562 * 25 23 21 46 46 H 1.08006 * 119.97676 * 180.02562 * 26 25 23 47 47 H 1.08999 * 113.62182 * 25.43212 * 27 14 13 48 48 H 1.09007 * 113.60695 * 156.33084 * 27 14 13 49 49 H 1.07996 * 120.03398 * 179.97438 * 28 10 9 50 50 H 1.08004 * 119.96170 * 179.97438 * 29 28 10 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4690 0.0000 0.0000 3 6 1.9955 1.3714 0.0000 4 6 1.9673 -0.7250 1.0768 5 6 2.7745 -1.8365 0.8518 6 6 3.1076 -2.2519 -0.5581 7 8 4.0790 -1.3558 -1.1017 8 14 3.7957 -3.9830 -0.5492 9 6 3.2732 -2.5533 1.9156 10 6 2.9598 -2.1703 3.2228 11 6 3.4881 -2.9398 4.3651 12 8 4.1973 -3.9080 4.1702 13 7 3.1846 -2.5695 5.6250 14 6 3.7088 -3.3340 6.7596 15 1 4.6169 -3.8851 6.5152 16 6 3.8151 -2.5158 8.0573 17 6 2.3725 -2.9547 8.3594 18 1 1.6172 -2.2822 7.9527 19 6 2.1355 -3.2930 9.8087 20 6 2.8553 -4.3098 10.4071 21 6 2.6425 -4.6173 11.7386 22 35 3.6327 -6.0035 12.5595 23 6 1.6995 -3.9129 12.4689 24 9 1.4868 -4.2154 13.7683 25 6 0.9754 -2.8984 11.8662 26 6 1.1945 -2.5891 10.5373 27 6 2.6444 -4.1828 7.4747 28 6 2.1444 -1.0566 3.4454 29 6 1.6526 -0.3415 2.3778 30 1 -0.3634 0.4513 0.9233 31 1 -0.3633 0.5740 -0.8525 32 1 -0.3634 -1.0252 -0.0709 33 1 3.0828 1.3431 -0.0708 34 1 1.5899 1.9163 -0.8525 35 1 1.7044 1.8724 0.9233 36 1 2.2048 -2.2228 -1.1682 37 1 4.9100 -1.3300 -0.6080 38 1 2.8073 -4.9195 0.0431 39 1 4.1288 -4.4043 -1.9338 40 1 3.9025 -3.4133 1.7404 41 1 2.6192 -1.7969 5.7806 42 1 4.5477 -2.9085 8.7623 43 1 3.9193 -1.4437 7.8902 44 1 3.5870 -4.8618 9.8358 45 1 0.2403 -2.3482 12.4347 46 1 0.6299 -1.7974 10.0673 47 1 1.8036 -4.4566 6.8375 48 1 3.0571 -5.0314 8.0205 49 1 1.9002 -0.7584 4.4543 50 1 1.0223 0.5187 2.5491 There are 71 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 71 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_9650940_13422196.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:56:16 Heat of formation + Delta-G solvation = -1.086289 kcal Electronic energy + Delta-G solvation = -34701.469579 eV Core-core repulsion = 29850.552354 eV Total energy + Delta-G solvation = -4850.917225 eV No. of doubly occupied orbitals = 71 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 449.079 amu Computer time = 0.89 seconds Orbital eigenvalues (eV) -50.07733 -41.87671 -41.24368 -40.22545 -38.78032 -37.79421 -37.16199 -34.74190 -33.55297 -32.74171 -31.73623 -31.01344 -30.38213 -28.52857 -26.88947 -26.75638 -26.67435 -25.60866 -24.11262 -23.35348 -22.85077 -22.54049 -21.31994 -20.26234 -19.10753 -18.83248 -17.96500 -17.69656 -17.61098 -17.22062 -16.86039 -16.85070 -16.49717 -16.21385 -16.08425 -15.92026 -15.60885 -15.51470 -15.47915 -15.02480 -14.75202 -14.70128 -14.63930 -14.34107 -14.21436 -14.05387 -13.96526 -13.87902 -13.56908 -13.40724 -13.26930 -13.05794 -12.96440 -12.64249 -12.52729 -12.36806 -12.24699 -12.10070 -12.03801 -12.01575 -11.55347 -11.40994 -11.23206 -11.08238 -10.38719 -10.17977 -10.07512 -10.01412 -9.74365 -9.58926 -9.48508 -5.02736 -0.35530 -0.16983 0.01257 0.18526 0.44377 1.28062 1.56662 1.69602 1.90172 2.03069 2.31510 2.66471 2.81625 3.03791 3.41452 3.52479 3.58027 3.62192 3.64538 3.70036 3.72832 3.84578 3.94498 4.04952 4.06948 4.09203 4.17602 4.25606 4.27496 4.37646 4.44479 4.47236 4.51763 4.60612 4.66084 4.68135 4.77492 4.79215 4.83745 4.86103 4.89644 4.94953 4.96930 5.02437 5.05120 5.06239 5.06610 5.14706 5.19290 5.28895 5.38883 5.56925 5.62216 5.67740 5.86909 6.31375 6.48434 6.82928 7.16429 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.024 3.976 2 N -0.525 5.525 3 C 0.034 3.966 4 C 0.136 3.864 5 C -0.118 4.118 6 C -0.037 4.037 7 O -0.542 6.542 8 Si 0.735 3.265 9 C -0.058 4.058 10 C -0.147 4.147 11 C 0.561 3.439 12 O -0.573 6.573 13 N -0.693 5.693 14 C 0.114 3.886 15 H 0.088 0.912 16 C -0.125 4.125 17 C -0.061 4.061 18 H 0.129 0.871 19 C -0.071 4.071 20 C -0.066 4.066 21 C -0.143 4.143 22 Br -0.045 7.045 23 C 0.094 3.906 24 F -0.141 7.141 25 C -0.146 4.146 26 C -0.063 4.063 27 C -0.147 4.147 28 C -0.054 4.054 29 C -0.157 4.157 30 H 0.045 0.955 31 H 0.081 0.919 32 H 0.062 0.938 33 H 0.067 0.933 34 H 0.078 0.922 35 H 0.042 0.958 36 H 0.106 0.894 37 H 0.389 0.611 38 H -0.295 1.295 39 H -0.291 1.291 40 H 0.139 0.861 41 H 0.416 0.584 42 H 0.099 0.901 43 H 0.096 0.904 44 H 0.150 0.850 45 H 0.161 0.839 46 H 0.173 0.827 47 H 0.071 0.929 48 H 0.093 0.907 49 H 0.163 0.837 50 H 0.149 0.851 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.909 8.429 0.937 8.966 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.122 4.122 2 N -0.246 5.246 3 C -0.111 4.111 4 C 0.042 3.958 5 C -0.119 4.119 6 C -0.148 4.148 7 O -0.349 6.349 8 Si 0.642 3.358 9 C -0.077 4.077 10 C -0.151 4.151 11 C 0.350 3.650 12 O -0.453 6.453 13 N -0.345 5.345 14 C 0.009 3.991 15 H 0.106 0.894 16 C -0.163 4.163 17 C -0.079 4.079 18 H 0.147 0.853 19 C -0.072 4.072 20 C -0.085 4.085 21 C -0.224 4.224 22 Br 0.041 6.959 23 C 0.073 3.927 24 F -0.119 7.119 25 C -0.165 4.165 26 C -0.081 4.081 27 C -0.186 4.186 28 C -0.073 4.073 29 C -0.177 4.177 30 H 0.064 0.936 31 H 0.100 0.900 32 H 0.081 0.919 33 H 0.086 0.914 34 H 0.096 0.904 35 H 0.061 0.939 36 H 0.124 0.876 37 H 0.238 0.762 38 H -0.222 1.222 39 H -0.218 1.218 40 H 0.157 0.843 41 H 0.255 0.745 42 H 0.117 0.883 43 H 0.114 0.886 44 H 0.168 0.832 45 H 0.179 0.821 46 H 0.190 0.810 47 H 0.090 0.910 48 H 0.112 0.888 49 H 0.181 0.819 50 H 0.166 0.834 Dipole moment (debyes) X Y Z Total from point charges -2.457 6.288 0.022 6.751 hybrid contribution -1.210 0.632 0.913 1.642 sum -3.666 6.920 0.935 7.887 Atomic orbital electron populations 1.22528 0.84856 1.02646 1.02161 1.59350 1.09075 1.15371 1.40836 1.22421 1.01006 0.86106 1.01616 1.18987 0.94101 0.93099 0.89648 1.20235 0.99691 0.96223 0.95749 1.24675 0.95184 1.03185 0.91796 1.86519 1.27638 1.65224 1.55477 0.94252 0.87642 0.73878 0.79997 1.21075 0.97155 0.98174 0.91285 1.19844 1.03404 0.98976 0.92837 1.18346 0.79548 0.83422 0.83696 1.90803 1.39335 1.29312 1.85862 1.45420 1.52330 1.32651 1.04067 1.21867 0.97556 0.94245 0.85455 0.89394 1.23401 0.96083 1.01841 0.94990 1.21674 0.98786 0.98536 0.88952 0.85326 1.19952 0.95725 0.94896 0.96669 1.21063 0.99360 0.97129 0.90959 1.22090 1.02136 1.00474 0.97664 1.96800 1.71476 1.46262 1.81410 1.17800 0.98076 0.97964 0.78851 1.91528 1.93821 1.92473 1.34112 1.21474 1.00981 0.96958 0.97081 1.21467 0.95823 0.98738 0.92069 1.23597 0.99479 0.97375 0.98139 1.21451 0.93281 0.91928 1.00682 1.21849 1.01961 1.01662 0.92237 0.93624 0.89979 0.91864 0.91426 0.90352 0.93947 0.87619 0.76221 1.22232 1.21832 0.84334 0.74523 0.88304 0.88562 0.83199 0.82143 0.80960 0.90988 0.88846 0.81923 0.83377 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.08 9.34 127.69 1.19 1.11 16 2 N -0.53 0.29 4.20 -745.10 -3.13 -2.84 16 3 C 0.03 -0.11 9.38 127.69 1.20 1.09 16 4 C 0.14 -0.10 4.70 38.47 0.18 0.08 16 5 C -0.12 -0.11 5.27 -19.78 -0.10 -0.21 16 6 C -0.04 -0.08 2.33 71.24 0.17 0.09 16 7 O -0.54 -0.96 12.88 -148.98 -1.92 -2.88 16 8 Si 0.74 1.95 29.92 68.60 2.05 4.01 16 9 C -0.06 -0.06 8.19 22.50 0.18 0.12 16 10 C -0.15 0.18 5.88 -20.08 -0.12 0.07 16 11 C 0.56 0.65 7.76 86.69 0.67 1.32 16 12 O -0.57 -5.62 15.93 -4.01 -0.06 -5.69 16 13 N -0.69 4.39 5.21 -443.22 -2.31 2.08 16 14 C 0.11 -0.64 4.32 45.51 0.20 -0.45 16 15 H 0.09 -0.05 7.46 -2.39 -0.02 -0.06 16 16 C -0.13 1.27 7.29 31.12 0.23 1.50 16 17 C -0.06 0.65 3.85 -11.01 -0.04 0.61 16 18 H 0.13 -1.96 8.09 -2.39 -0.02 -1.98 16 19 C -0.07 0.48 5.29 -19.86 -0.11 0.37 16 20 C -0.07 0.17 8.36 22.28 0.19 0.36 16 21 C -0.14 -0.32 6.23 22.35 0.14 -0.18 16 22 Br -0.04 -0.20 33.28 -20.37 -0.68 -0.88 16 23 C 0.09 0.25 7.27 22.39 0.16 0.41 16 24 F -0.14 -0.96 16.73 44.97 0.75 -0.20 16 25 C -0.15 0.50 10.03 22.31 0.22 0.72 16 26 C -0.06 0.49 9.71 22.27 0.22 0.71 16 27 C -0.15 0.96 7.25 31.12 0.23 1.19 16 28 C -0.05 0.38 9.53 22.50 0.21 0.59 16 29 C -0.16 0.83 8.53 22.36 0.19 1.02 16 30 H 0.05 -0.28 7.10 -2.39 -0.02 -0.29 16 31 H 0.08 -0.36 8.12 -2.38 -0.02 -0.38 16 32 H 0.06 -0.12 8.14 -2.39 -0.02 -0.14 16 33 H 0.07 -0.09 8.14 -2.39 -0.02 -0.11 16 34 H 0.08 -0.29 8.12 -2.39 -0.02 -0.31 16 35 H 0.04 -0.24 7.32 -2.38 -0.02 -0.26 16 36 H 0.11 0.49 7.77 -2.39 -0.02 0.47 16 37 H 0.39 -2.28 8.70 -74.06 -0.64 -2.93 16 38 H -0.30 -2.63 7.11 99.48 0.71 -1.93 16 39 H -0.29 -2.65 7.11 99.48 0.71 -1.94 16 40 H 0.14 0.22 4.70 -2.91 -0.01 0.21 16 41 H 0.42 -5.50 6.72 -92.71 -0.62 -6.12 16 42 H 0.10 -0.90 7.73 -2.39 -0.02 -0.92 16 43 H 0.10 -1.21 8.14 -2.39 -0.02 -1.23 16 44 H 0.15 -0.69 6.64 -2.91 -0.02 -0.71 16 45 H 0.16 -1.13 8.06 -2.91 -0.02 -1.15 16 46 H 0.17 -2.49 8.05 -2.91 -0.02 -2.51 16 47 H 0.07 -0.34 8.14 -2.39 -0.02 -0.36 16 48 H 0.09 -0.53 6.30 -2.38 -0.02 -0.55 16 49 H 0.16 -2.40 6.39 -2.91 -0.02 -2.42 16 50 H 0.15 -1.34 6.99 -2.91 -0.02 -1.36 16 Total: 0.00 -22.57 429.72 -0.30 -22.87 By element: Atomic # 1 Polarization: -26.77 SS G_CDS: -0.21 Total: -26.98 kcal Atomic # 6 Polarization: 5.32 SS G_CDS: 5.21 Total: 10.52 kcal Atomic # 7 Polarization: 4.67 SS G_CDS: -5.44 Total: -0.77 kcal Atomic # 8 Polarization: -6.59 SS G_CDS: -1.98 Total: -8.57 kcal Atomic # 9 Polarization: -0.96 SS G_CDS: 0.75 Total: -0.20 kcal Atomic # 14 Polarization: 1.95 SS G_CDS: 2.05 Total: 4.01 kcal Atomic # 35 Polarization: -0.20 SS G_CDS: -0.68 Total: -0.88 kcal Total: -22.57 -0.30 -22.87 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9650940_13422196.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 21.783 kcal (2) G-P(sol) polarization free energy of solvation -22.568 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -0.785 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.301 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.869 kcal (6) G-S(sol) free energy of system = (1) + (5) -1.086 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.89 seconds