Wall clock time and date at job start Tue Mar 9 2021 12:56:38 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42895 * 1 3 3 Si 1.86299 * 109.47347 * 2 1 4 4 C 1.50704 * 109.47462 * 120.00325 * 2 1 3 5 5 C 1.31109 * 118.54508 * 250.02660 * 4 2 1 6 6 N 1.38933 * 121.84786 * 179.57111 * 5 4 2 7 7 C 1.47029 * 118.87920 * 13.30814 * 6 5 4 8 8 C 1.50706 * 109.81714 * 196.79576 * 7 6 5 9 9 O 1.21280 * 120.00031 * 18.21387 * 8 7 6 10 10 N 1.34780 * 119.99755 * 198.21015 * 8 7 6 11 11 C 1.46502 * 119.99583 * 180.02562 * 10 8 7 12 12 H 1.08994 * 112.85154 * 336.19420 * 11 10 8 13 13 C 1.53779 * 113.69134 * 107.46310 * 11 10 8 14 14 C 1.53785 * 87.08093 * 89.12362 * 13 11 10 15 15 H 1.09002 * 113.61570 * 270.88522 * 14 13 11 16 16 C 1.50701 * 113.69000 * 139.98979 * 14 13 11 17 17 C 1.38222 * 119.97213 * 320.66252 * 16 14 13 18 18 C 1.38238 * 120.04347 * 179.76514 * 17 16 14 19 19 C 1.38407 * 119.98382 * 0.50941 * 18 17 16 20 20 F 1.35096 * 120.03177 * 179.76891 * 19 18 17 21 21 C 1.38573 * 119.94067 * 359.74255 * 19 18 17 22 22 Br 1.89097 * 120.01980 * 180.02562 * 21 19 18 23 23 C 1.38258 * 119.95584 * 0.02562 * 21 19 18 24 24 C 1.53781 * 87.08241 * 25.43228 * 14 13 11 25 25 C 1.53531 * 107.66182 * 316.33715 * 7 6 5 26 26 C 1.50206 * 118.54721 * 69.99479 * 4 2 1 27 27 H 0.96702 * 113.99885 * 299.99709 * 1 2 3 28 28 H 1.09004 * 109.46970 * 240.00071 * 2 1 3 29 29 H 1.48495 * 110.00242 * 178.68097 * 3 2 1 30 30 H 1.48497 * 110.00176 * 300.00657 * 3 2 1 31 31 H 1.08001 * 119.08113 * 359.53878 * 5 4 2 32 32 H 0.96993 * 120.55915 * 193.33314 * 6 5 4 33 33 H 1.09007 * 109.87405 * 75.91262 * 7 6 5 34 34 H 0.96999 * 120.00116 * 359.97438 * 10 8 7 35 35 H 1.09003 * 113.61775 * 334.58239 * 13 11 10 36 36 H 1.08996 * 113.61960 * 203.66965 * 13 11 10 37 37 H 1.08000 * 119.97835 * 0.02562 * 17 16 14 38 38 H 1.07996 * 120.00694 * 180.27571 * 18 17 16 39 39 H 1.08000 * 119.99119 * 179.97438 * 23 21 19 40 40 H 1.09005 * 113.61302 * 89.11252 * 24 14 13 41 41 H 1.08993 * 113.62030 * 220.02098 * 24 14 13 42 42 H 1.09009 * 109.62473 * 180.67501 * 25 7 6 43 43 H 1.08996 * 109.62716 * 301.04070 * 25 7 6 44 44 H 1.08998 * 109.32662 * 79.81638 * 26 4 2 45 45 H 1.08996 * 109.19106 * 320.25364 * 26 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4289 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9314 -0.7105 1.2304 5 6 2.5111 -0.0029 2.1696 6 7 2.9915 -0.5858 3.3357 7 6 3.1168 -2.0494 3.3984 8 6 3.2500 -2.4897 4.8336 9 8 2.9185 -1.7432 5.7302 10 7 3.7373 -3.7131 5.1206 11 6 3.8663 -4.1413 6.5157 12 1 3.9420 -3.3045 7.2101 13 6 2.8315 -5.1985 6.9357 14 6 3.8391 -6.2591 6.4615 15 1 3.7347 -6.5205 5.4084 16 6 3.9146 -7.4669 7.3596 17 6 3.8526 -7.3120 8.7317 18 6 3.9169 -8.4194 9.5568 19 6 4.0541 -9.6830 9.0090 20 9 4.1217 -10.7654 9.8146 21 6 4.1215 -9.8370 7.6336 22 35 4.3081 -11.5625 6.8828 23 6 4.0521 -8.7283 6.8105 24 6 4.9403 -5.2204 6.7320 25 6 1.8453 -2.6525 2.7846 26 6 1.7451 -2.1978 1.3268 27 1 -0.3933 0.4417 0.7651 28 1 1.7923 -0.5138 -0.8900 29 1 3.5345 1.7702 0.0321 30 1 1.5614 2.4679 -1.2084 31 1 2.6188 1.0630 2.0329 32 1 3.2397 -0.0365 4.0956 33 1 3.9899 -2.3713 2.8307 34 1 4.0020 -4.3102 4.4035 35 1 1.9156 -5.1717 6.3454 36 1 2.6439 -5.2237 8.0091 37 1 3.7496 -6.3257 9.1594 38 1 3.8639 -8.2981 10.6286 39 1 4.1050 -8.8477 5.7384 40 1 5.3293 -5.2515 7.7499 41 1 5.7268 -5.2111 5.9775 42 1 1.8994 -3.7405 2.8259 43 1 0.9723 -2.3083 3.3391 44 1 2.5159 -2.6967 0.7395 45 1 0.7638 -2.4623 0.9330 There are 64 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 64 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_9650940_15413834.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:56:38 Heat of formation + Delta-G solvation = -32.851640 kcal Electronic energy + Delta-G solvation = -29582.848663 eV Core-core repulsion = 25142.543889 eV Total energy + Delta-G solvation = -4440.304774 eV No. of doubly occupied orbitals = 64 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 411.063 amu Computer time = 1.20 seconds Orbital eigenvalues (eV) -50.02754 -41.96344 -41.00495 -39.73547 -38.79108 -37.30697 -34.87976 -33.53568 -33.25271 -32.98914 -31.87713 -30.31765 -27.80111 -26.98696 -26.20095 -25.40760 -24.27412 -23.80882 -22.83557 -22.00890 -20.42368 -19.49156 -19.15065 -18.91461 -18.17945 -17.73799 -17.43004 -16.97169 -16.81079 -16.75716 -16.38599 -15.88814 -15.79582 -15.69715 -15.53501 -15.29249 -14.94077 -14.82305 -14.57670 -14.42195 -14.28380 -14.18596 -13.93711 -13.90311 -13.68767 -13.39021 -13.17238 -12.97171 -12.54740 -12.25808 -12.21246 -12.12210 -12.00755 -11.79797 -11.74204 -11.59315 -11.36236 -11.32578 -10.92931 -10.30706 -10.17062 -10.13291 -9.68505 -8.51838 -4.99441 -0.28979 -0.11839 0.41678 1.27716 1.39527 1.40556 1.65448 1.71283 2.04618 2.15737 2.53237 2.95085 3.16030 3.28933 3.34189 3.43567 3.50252 3.61679 3.66069 3.69322 3.78083 3.80256 3.84830 3.92570 3.98812 4.22671 4.29231 4.33305 4.37139 4.46075 4.50529 4.58115 4.60644 4.63644 4.68518 4.69499 4.70515 4.76818 4.86275 4.89408 4.96988 5.11140 5.16590 5.23001 5.35888 5.49619 5.51268 6.11980 6.29006 6.73263 6.78481 6.96173 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.546 6.546 2 C -0.043 4.043 3 Si 0.667 3.333 4 C -0.280 4.280 5 C 0.144 3.856 6 N -0.732 5.732 7 C 0.136 3.864 8 C 0.516 3.484 9 O -0.526 6.526 10 N -0.710 5.710 11 C 0.119 3.881 12 H 0.108 0.892 13 C -0.143 4.143 14 C -0.073 4.073 15 H 0.102 0.898 16 C -0.077 4.077 17 C -0.073 4.073 18 C -0.143 4.143 19 C 0.124 3.876 20 F -0.123 7.123 21 C -0.129 4.129 22 Br -0.026 7.026 23 C -0.059 4.059 24 C -0.136 4.136 25 C -0.125 4.125 26 C -0.054 4.054 27 H 0.376 0.624 28 H 0.104 0.896 29 H -0.261 1.261 30 H -0.258 1.258 31 H 0.133 0.867 32 H 0.410 0.590 33 H 0.090 0.910 34 H 0.404 0.596 35 H 0.078 0.922 36 H 0.097 0.903 37 H 0.141 0.859 38 H 0.147 0.853 39 H 0.142 0.858 40 H 0.101 0.899 41 H 0.080 0.920 42 H 0.077 0.923 43 H 0.078 0.922 44 H 0.064 0.936 45 H 0.080 0.920 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.417 1.378 0.915 2.178 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.351 6.351 2 C -0.155 4.155 3 Si 0.570 3.430 4 C -0.291 4.291 5 C 0.024 3.976 6 N -0.366 5.366 7 C 0.027 3.973 8 C 0.302 3.698 9 O -0.401 6.401 10 N -0.361 5.361 11 C 0.014 3.986 12 H 0.126 0.874 13 C -0.182 4.182 14 C -0.091 4.091 15 H 0.121 0.879 16 C -0.078 4.078 17 C -0.091 4.091 18 C -0.162 4.162 19 C 0.102 3.898 20 F -0.102 7.102 21 C -0.210 4.210 22 Br 0.059 6.941 23 C -0.079 4.079 24 C -0.174 4.174 25 C -0.164 4.164 26 C -0.091 4.091 27 H 0.223 0.777 28 H 0.121 0.879 29 H -0.186 1.186 30 H -0.183 1.183 31 H 0.150 0.850 32 H 0.247 0.753 33 H 0.108 0.892 34 H 0.238 0.762 35 H 0.097 0.903 36 H 0.115 0.885 37 H 0.159 0.841 38 H 0.164 0.836 39 H 0.160 0.840 40 H 0.119 0.881 41 H 0.099 0.901 42 H 0.096 0.904 43 H 0.096 0.904 44 H 0.082 0.918 45 H 0.098 0.902 Dipole moment (debyes) X Y Z Total from point charges 1.850 1.395 0.323 2.339 hybrid contribution 0.370 -0.689 0.074 0.785 sum 2.220 0.706 0.398 2.363 Atomic orbital electron populations 1.86473 1.17904 1.81669 1.49089 1.24670 0.84722 1.08332 0.97801 0.95256 0.80967 0.79094 0.87663 1.20954 1.11340 0.96935 0.99832 1.20306 0.94381 0.96031 0.86871 1.44259 1.72729 1.04026 1.15551 1.20988 1.00152 0.83634 0.92534 1.20624 0.76523 0.81557 0.91112 1.90743 1.47999 1.53199 1.48196 1.45610 1.65711 1.16651 1.08157 1.21860 0.96315 0.97037 0.83392 0.87415 1.23584 0.97833 0.94184 1.02588 1.21623 0.97735 0.90920 0.98845 0.87942 1.19737 1.00128 0.93928 0.93974 1.21035 0.96590 0.98904 0.92575 1.21196 1.03008 0.90274 1.01766 1.17441 1.01477 0.84190 0.86679 1.91581 1.93230 1.52944 1.72397 1.22009 1.11409 0.94006 0.93547 1.96834 1.96638 1.17315 1.83275 1.20944 0.96845 0.90027 1.00055 1.23458 0.96447 0.93630 1.03832 1.21855 0.96627 1.00364 0.97523 1.19953 1.02535 0.92075 0.94565 0.77717 0.87905 1.18585 1.18278 0.84983 0.75324 0.89246 0.76162 0.90337 0.88464 0.84111 0.83560 0.84021 0.88102 0.90130 0.90403 0.90365 0.91790 0.90174 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 28. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 -0.38 12.88 -35.23 -0.45 -0.83 16 2 C -0.04 0.00 2.81 36.01 0.10 0.10 16 3 Si 0.67 -0.51 29.72 -169.99 -5.05 -5.57 16 4 C -0.28 0.16 5.37 -101.33 -0.54 -0.39 16 5 C 0.14 -0.16 9.62 -16.08 -0.15 -0.32 16 6 N -0.73 0.68 5.47 -55.34 -0.30 0.38 16 7 C 0.14 -0.26 3.36 -68.52 -0.23 -0.49 16 8 C 0.52 -0.44 7.10 -10.98 -0.08 -0.52 16 9 O -0.53 -1.58 15.66 5.56 0.09 -1.49 16 10 N -0.71 2.48 5.27 -53.01 -0.28 2.20 16 11 C 0.12 -0.39 4.32 -67.11 -0.29 -0.68 16 12 H 0.11 -0.16 7.46 -51.93 -0.39 -0.54 16 13 C -0.14 0.52 7.26 -25.92 -0.19 0.33 16 14 C -0.07 0.32 3.86 -90.96 -0.35 -0.04 16 15 H 0.10 -0.54 8.09 -51.93 -0.42 -0.96 16 16 C -0.08 0.20 5.29 -104.62 -0.55 -0.36 16 17 C -0.07 0.19 8.53 -39.59 -0.34 -0.14 16 18 C -0.14 0.17 10.03 -39.52 -0.40 -0.22 16 19 C 0.12 0.12 7.27 -39.40 -0.29 -0.16 16 20 F -0.12 -0.33 16.73 2.25 0.04 -0.29 16 21 C -0.13 -0.08 6.23 -39.45 -0.25 -0.33 16 22 Br -0.03 -0.04 33.28 -68.01 -2.26 -2.30 16 23 C -0.06 0.08 9.45 -39.57 -0.37 -0.29 16 24 C -0.14 0.62 7.29 -25.92 -0.19 0.43 16 25 C -0.12 0.25 5.47 -26.44 -0.14 0.11 16 26 C -0.05 0.06 5.85 -28.10 -0.16 -0.11 16 27 H 0.38 -1.11 8.70 45.56 0.40 -0.72 16 28 H 0.10 0.07 7.96 -51.93 -0.41 -0.35 16 29 H -0.26 -0.42 7.11 56.52 0.40 -0.02 16 30 H -0.26 -0.74 7.11 56.52 0.40 -0.34 16 31 H 0.13 -0.38 4.48 -52.49 -0.24 -0.61 16 32 H 0.41 -0.34 8.08 -40.82 -0.33 -0.67 16 33 H 0.09 -0.28 8.14 -51.92 -0.42 -0.71 16 34 H 0.40 -2.38 8.70 -40.82 -0.36 -2.74 16 35 H 0.08 -0.21 8.14 -51.93 -0.42 -0.63 16 36 H 0.10 -0.39 6.41 -51.93 -0.33 -0.72 16 37 H 0.14 -0.67 6.72 -52.49 -0.35 -1.02 16 38 H 0.15 -0.41 8.06 -52.49 -0.42 -0.84 16 39 H 0.14 -0.41 8.05 -52.49 -0.42 -0.83 16 40 H 0.10 -0.47 7.62 -51.93 -0.40 -0.87 16 41 H 0.08 -0.39 8.14 -51.93 -0.42 -0.81 16 42 H 0.08 -0.29 8.14 -51.92 -0.42 -0.72 16 43 H 0.08 -0.03 8.14 -51.93 -0.42 -0.45 16 44 H 0.06 -0.09 8.14 -51.93 -0.42 -0.52 16 45 H 0.08 -0.01 8.14 -51.93 -0.42 -0.44 16 LS Contribution 389.65 15.07 5.87 5.87 Total: 0.00 -7.98 389.65 -12.61 -20.59 By element: Atomic # 1 Polarization: -9.67 SS G_CDS: -5.83 Total: -15.50 kcal Atomic # 6 Polarization: 1.36 SS G_CDS: -4.43 Total: -3.06 kcal Atomic # 7 Polarization: 3.16 SS G_CDS: -0.58 Total: 2.58 kcal Atomic # 8 Polarization: -1.96 SS G_CDS: -0.37 Total: -2.33 kcal Atomic # 9 Polarization: -0.33 SS G_CDS: 0.04 Total: -0.29 kcal Atomic # 14 Polarization: -0.51 SS G_CDS: -5.05 Total: -5.57 kcal Atomic # 35 Polarization: -0.04 SS G_CDS: -2.26 Total: -2.30 kcal Total LS contribution 5.87 Total: 5.87 kcal Total: -7.98 -12.61 -20.59 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9650940_15413834.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -12.263 kcal (2) G-P(sol) polarization free energy of solvation -7.979 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -20.242 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.610 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.589 kcal (6) G-S(sol) free energy of system = (1) + (5) -32.852 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.20 seconds