Wall clock time and date at job start Tue Mar 9 2021 12:56:38 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42895 * 1 3 3 Si 1.86299 * 109.47347 * 2 1 4 4 C 1.50704 * 109.47462 * 120.00325 * 2 1 3 5 5 C 1.31109 * 118.54508 * 250.02660 * 4 2 1 6 6 N 1.38933 * 121.84786 * 179.57111 * 5 4 2 7 7 C 1.47029 * 118.87920 * 13.30814 * 6 5 4 8 8 C 1.50706 * 109.81714 * 196.79576 * 7 6 5 9 9 O 1.21280 * 120.00031 * 18.21387 * 8 7 6 10 10 N 1.34780 * 119.99755 * 198.21015 * 8 7 6 11 11 C 1.46502 * 119.99583 * 180.02562 * 10 8 7 12 12 H 1.08994 * 112.85154 * 336.19420 * 11 10 8 13 13 C 1.53779 * 113.69134 * 107.46310 * 11 10 8 14 14 C 1.53785 * 87.08093 * 89.12362 * 13 11 10 15 15 H 1.09002 * 113.61570 * 270.88522 * 14 13 11 16 16 C 1.50701 * 113.69000 * 139.98979 * 14 13 11 17 17 C 1.38222 * 119.97213 * 320.66252 * 16 14 13 18 18 C 1.38238 * 120.04347 * 179.76514 * 17 16 14 19 19 C 1.38407 * 119.98382 * 0.50941 * 18 17 16 20 20 F 1.35096 * 120.03177 * 179.76891 * 19 18 17 21 21 C 1.38573 * 119.94067 * 359.74255 * 19 18 17 22 22 Br 1.89097 * 120.01980 * 180.02562 * 21 19 18 23 23 C 1.38258 * 119.95584 * 0.02562 * 21 19 18 24 24 C 1.53781 * 87.08241 * 25.43228 * 14 13 11 25 25 C 1.53531 * 107.66182 * 316.33715 * 7 6 5 26 26 C 1.50206 * 118.54721 * 69.99479 * 4 2 1 27 27 H 0.96702 * 113.99885 * 299.99709 * 1 2 3 28 28 H 1.09004 * 109.46970 * 240.00071 * 2 1 3 29 29 H 1.48495 * 110.00242 * 178.68097 * 3 2 1 30 30 H 1.48497 * 110.00176 * 300.00657 * 3 2 1 31 31 H 1.08001 * 119.08113 * 359.53878 * 5 4 2 32 32 H 0.96993 * 120.55915 * 193.33314 * 6 5 4 33 33 H 1.09007 * 109.87405 * 75.91262 * 7 6 5 34 34 H 0.96999 * 120.00116 * 359.97438 * 10 8 7 35 35 H 1.09003 * 113.61775 * 334.58239 * 13 11 10 36 36 H 1.08996 * 113.61960 * 203.66965 * 13 11 10 37 37 H 1.08000 * 119.97835 * 0.02562 * 17 16 14 38 38 H 1.07996 * 120.00694 * 180.27571 * 18 17 16 39 39 H 1.08000 * 119.99119 * 179.97438 * 23 21 19 40 40 H 1.09005 * 113.61302 * 89.11252 * 24 14 13 41 41 H 1.08993 * 113.62030 * 220.02098 * 24 14 13 42 42 H 1.09009 * 109.62473 * 180.67501 * 25 7 6 43 43 H 1.08996 * 109.62716 * 301.04070 * 25 7 6 44 44 H 1.08998 * 109.32662 * 79.81638 * 26 4 2 45 45 H 1.08996 * 109.19106 * 320.25364 * 26 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4289 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9314 -0.7105 1.2304 5 6 2.5111 -0.0029 2.1696 6 7 2.9915 -0.5858 3.3357 7 6 3.1168 -2.0494 3.3984 8 6 3.2500 -2.4897 4.8336 9 8 2.9185 -1.7432 5.7302 10 7 3.7373 -3.7131 5.1206 11 6 3.8663 -4.1413 6.5157 12 1 3.9420 -3.3045 7.2101 13 6 2.8315 -5.1985 6.9357 14 6 3.8391 -6.2591 6.4615 15 1 3.7347 -6.5205 5.4084 16 6 3.9146 -7.4669 7.3596 17 6 3.8526 -7.3120 8.7317 18 6 3.9169 -8.4194 9.5568 19 6 4.0541 -9.6830 9.0090 20 9 4.1217 -10.7654 9.8146 21 6 4.1215 -9.8370 7.6336 22 35 4.3081 -11.5625 6.8828 23 6 4.0521 -8.7283 6.8105 24 6 4.9403 -5.2204 6.7320 25 6 1.8453 -2.6525 2.7846 26 6 1.7451 -2.1978 1.3268 27 1 -0.3933 0.4417 0.7651 28 1 1.7923 -0.5138 -0.8900 29 1 3.5345 1.7702 0.0321 30 1 1.5614 2.4679 -1.2084 31 1 2.6188 1.0630 2.0329 32 1 3.2397 -0.0365 4.0956 33 1 3.9899 -2.3713 2.8307 34 1 4.0020 -4.3102 4.4035 35 1 1.9156 -5.1717 6.3454 36 1 2.6439 -5.2237 8.0091 37 1 3.7496 -6.3257 9.1594 38 1 3.8639 -8.2981 10.6286 39 1 4.1050 -8.8477 5.7384 40 1 5.3293 -5.2515 7.7499 41 1 5.7268 -5.2111 5.9775 42 1 1.8994 -3.7405 2.8259 43 1 0.9723 -2.3083 3.3391 44 1 2.5159 -2.6967 0.7395 45 1 0.7638 -2.4623 0.9330 There are 64 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 64 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_9650940_15413834.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:56:38 Heat of formation + Delta-G solvation = -30.522208 kcal Electronic energy + Delta-G solvation = -29582.747651 eV Core-core repulsion = 25142.543889 eV Total energy + Delta-G solvation = -4440.203762 eV No. of doubly occupied orbitals = 64 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 411.063 amu Computer time = 0.64 seconds Orbital eigenvalues (eV) -50.08568 -41.77940 -40.86487 -39.62277 -38.67186 -37.28728 -34.75033 -33.45915 -33.15848 -32.86888 -31.73807 -30.24995 -27.70210 -26.66125 -26.02931 -25.30324 -24.13752 -23.69679 -22.68282 -21.86621 -20.19458 -19.39032 -19.01824 -18.84101 -18.10189 -17.64335 -17.31674 -16.86109 -16.79427 -16.64896 -16.26312 -15.84303 -15.68980 -15.55805 -15.42227 -15.22008 -14.81211 -14.68340 -14.42050 -14.36493 -14.16386 -14.12335 -13.88297 -13.72146 -13.41484 -13.24961 -13.08640 -12.91475 -12.37076 -12.20119 -12.11047 -12.02706 -11.87991 -11.83439 -11.56005 -11.45537 -11.25597 -11.21307 -10.87006 -10.16329 -10.10918 -10.02880 -9.59545 -8.42401 -4.97651 -0.19330 0.01417 0.43675 1.37539 1.42064 1.48763 1.64225 1.89984 2.01586 2.30012 2.67258 3.02960 3.44546 3.49385 3.54973 3.68818 3.70582 3.75918 3.81336 3.90958 3.96114 4.03799 4.09011 4.11036 4.16173 4.35954 4.47857 4.51843 4.59539 4.65486 4.65919 4.79413 4.79915 4.81760 4.85218 4.87239 4.95491 5.04583 5.06680 5.09442 5.17038 5.23618 5.32661 5.37448 5.60429 5.62741 5.64762 6.27610 6.48317 6.85621 6.93589 7.13797 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.565 6.565 2 C -0.047 4.047 3 Si 0.754 3.246 4 C -0.292 4.292 5 C 0.145 3.855 6 N -0.737 5.737 7 C 0.137 3.863 8 C 0.517 3.483 9 O -0.570 6.570 10 N -0.695 5.695 11 C 0.115 3.885 12 H 0.089 0.911 13 C -0.142 4.142 14 C -0.065 4.065 15 H 0.118 0.882 16 C -0.070 4.070 17 C -0.069 4.069 18 C -0.145 4.145 19 C 0.094 3.906 20 F -0.141 7.141 21 C -0.143 4.143 22 Br -0.043 7.043 23 C -0.062 4.062 24 C -0.125 4.125 25 C -0.118 4.118 26 C -0.054 4.054 27 H 0.391 0.609 28 H 0.093 0.907 29 H -0.289 1.289 30 H -0.309 1.309 31 H 0.147 0.853 32 H 0.409 0.591 33 H 0.109 0.891 34 H 0.418 0.582 35 H 0.071 0.929 36 H 0.101 0.899 37 H 0.165 0.835 38 H 0.159 0.841 39 H 0.156 0.844 40 H 0.105 0.895 41 H 0.089 0.911 42 H 0.099 0.901 43 H 0.060 0.940 44 H 0.070 0.930 45 H 0.069 0.931 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.898 1.717 0.891 2.710 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.372 6.372 2 C -0.159 4.159 3 Si 0.662 3.338 4 C -0.303 4.303 5 C 0.025 3.975 6 N -0.370 5.370 7 C 0.028 3.972 8 C 0.304 3.696 9 O -0.448 6.448 10 N -0.347 5.347 11 C 0.009 3.991 12 H 0.107 0.893 13 C -0.180 4.180 14 C -0.083 4.083 15 H 0.136 0.864 16 C -0.071 4.071 17 C -0.087 4.087 18 C -0.164 4.164 19 C 0.073 3.927 20 F -0.119 7.119 21 C -0.223 4.223 22 Br 0.042 6.958 23 C -0.082 4.082 24 C -0.163 4.163 25 C -0.157 4.157 26 C -0.091 4.091 27 H 0.240 0.760 28 H 0.111 0.889 29 H -0.216 1.216 30 H -0.237 1.237 31 H 0.164 0.836 32 H 0.246 0.754 33 H 0.126 0.874 34 H 0.256 0.744 35 H 0.089 0.911 36 H 0.120 0.880 37 H 0.182 0.818 38 H 0.177 0.823 39 H 0.174 0.826 40 H 0.124 0.876 41 H 0.108 0.892 42 H 0.117 0.883 43 H 0.079 0.921 44 H 0.088 0.912 45 H 0.087 0.913 Dipole moment (debyes) X Y Z Total from point charges 2.333 1.683 0.313 2.894 hybrid contribution 0.209 -0.733 0.062 0.764 sum 2.542 0.950 0.375 2.739 Atomic orbital electron populations 1.86431 1.18354 1.82122 1.50308 1.24743 0.84546 1.08820 0.97785 0.94272 0.77767 0.76656 0.85127 1.20957 1.12096 0.97360 0.99837 1.20477 0.93763 0.96709 0.86564 1.44377 1.72532 1.04598 1.15494 1.21099 1.00860 0.83181 0.92065 1.20793 0.75988 0.81815 0.91036 1.90727 1.50154 1.54575 1.49361 1.45513 1.64429 1.16028 1.08714 1.21861 0.97426 0.96718 0.83060 0.89295 1.23583 0.97493 0.94102 1.02843 1.21651 0.97490 0.89878 0.99300 0.86405 1.19950 0.98807 0.94011 0.94310 1.21346 0.95303 0.99472 0.92564 1.21427 1.02453 0.89768 1.02752 1.17785 1.03415 0.84579 0.86905 1.91529 1.93636 1.53882 1.72863 1.22129 1.12657 0.93847 0.93713 1.96799 1.96770 1.18860 1.83337 1.21165 0.96470 0.89854 1.00666 1.23421 0.96180 0.92265 1.04465 1.21797 0.95794 1.01592 0.96467 1.19947 1.02113 0.91891 0.95195 0.75989 0.88921 1.21610 1.23736 0.83629 0.75447 0.87400 0.74448 0.91068 0.88034 0.81771 0.82304 0.82596 0.87649 0.89217 0.88299 0.92147 0.91178 0.91269 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.56 -0.91 12.88 -148.98 -1.92 -2.83 16 2 C -0.05 0.00 2.81 71.24 0.20 0.20 16 3 Si 0.75 -0.90 29.72 68.60 2.04 1.14 16 4 C -0.29 0.40 5.37 -16.75 -0.09 0.31 16 5 C 0.15 -0.40 9.62 83.42 0.80 0.40 16 6 N -0.74 1.68 5.47 -329.00 -1.80 -0.12 16 7 C 0.14 -0.65 3.36 44.32 0.15 -0.51 16 8 C 0.52 -1.21 7.10 87.66 0.62 -0.59 16 9 O -0.57 -3.58 15.66 -3.03 -0.05 -3.63 16 10 N -0.69 5.85 5.27 -440.02 -2.32 3.54 16 11 C 0.11 -0.89 4.32 45.52 0.20 -0.69 16 12 H 0.09 -0.28 7.46 -2.39 -0.02 -0.30 16 13 C -0.14 1.24 7.26 31.12 0.23 1.47 16 14 C -0.06 0.70 3.86 -11.01 -0.04 0.66 16 15 H 0.12 -1.59 8.09 -2.39 -0.02 -1.60 16 16 C -0.07 0.47 5.29 -19.86 -0.11 0.37 16 17 C -0.07 0.46 8.53 22.27 0.19 0.65 16 18 C -0.14 0.40 10.03 22.31 0.22 0.63 16 19 C 0.09 0.25 7.27 22.39 0.16 0.41 16 20 F -0.14 -0.95 16.73 44.97 0.75 -0.20 16 21 C -0.14 -0.23 6.23 22.35 0.14 -0.09 16 22 Br -0.04 -0.15 33.28 -20.37 -0.68 -0.83 16 23 C -0.06 0.22 9.45 22.28 0.21 0.43 16 24 C -0.13 1.41 7.29 31.12 0.23 1.64 16 25 C -0.12 0.58 5.47 30.78 0.17 0.75 16 26 C -0.05 0.14 5.85 29.70 0.17 0.31 16 27 H 0.39 -2.34 8.70 -74.06 -0.64 -2.98 16 28 H 0.09 0.17 7.96 -2.39 -0.02 0.15 16 29 H -0.29 -1.00 7.11 99.48 0.71 -0.29 16 30 H -0.31 -2.27 7.11 99.48 0.71 -1.56 16 31 H 0.15 -0.93 4.48 -2.91 -0.01 -0.94 16 32 H 0.41 -0.69 8.08 -92.71 -0.75 -1.44 16 33 H 0.11 -0.89 8.14 -2.38 -0.02 -0.91 16 34 H 0.42 -5.92 8.70 -92.71 -0.81 -6.73 16 35 H 0.07 -0.47 8.14 -2.39 -0.02 -0.49 16 36 H 0.10 -0.97 6.41 -2.39 -0.02 -0.98 16 37 H 0.16 -1.93 6.72 -2.91 -0.02 -1.94 16 38 H 0.16 -0.97 8.06 -2.91 -0.02 -0.99 16 39 H 0.16 -1.10 8.05 -2.91 -0.02 -1.13 16 40 H 0.11 -1.22 7.62 -2.38 -0.02 -1.24 16 41 H 0.09 -1.11 8.14 -2.39 -0.02 -1.13 16 42 H 0.10 -0.92 8.14 -2.38 -0.02 -0.94 16 43 H 0.06 -0.05 8.14 -2.39 -0.02 -0.07 16 44 H 0.07 -0.27 8.14 -2.39 -0.02 -0.29 16 45 H 0.07 -0.02 8.14 -2.39 -0.02 -0.04 16 Total: 0.00 -20.81 389.65 -1.61 -22.42 By element: Atomic # 1 Polarization: -24.76 SS G_CDS: -1.09 Total: -25.85 kcal Atomic # 6 Polarization: 2.91 SS G_CDS: 3.45 Total: 6.36 kcal Atomic # 7 Polarization: 7.54 SS G_CDS: -4.12 Total: 3.42 kcal Atomic # 8 Polarization: -4.49 SS G_CDS: -1.97 Total: -6.46 kcal Atomic # 9 Polarization: -0.95 SS G_CDS: 0.75 Total: -0.20 kcal Atomic # 14 Polarization: -0.90 SS G_CDS: 2.04 Total: 1.14 kcal Atomic # 35 Polarization: -0.15 SS G_CDS: -0.68 Total: -0.83 kcal Total: -20.81 -1.61 -22.42 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9650940_15413834.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -8.102 kcal (2) G-P(sol) polarization free energy of solvation -20.813 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -28.915 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -1.607 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.420 kcal (6) G-S(sol) free energy of system = (1) + (5) -30.522 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.64 seconds