Wall clock time and date at job start Tue Mar 9 2021 12:57:25 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42903 * 1 3 3 C 1.35992 * 116.99869 * 2 1 4 4 C 1.39157 * 120.07234 * 180.02562 * 3 2 1 5 5 O 1.35992 * 120.07487 * 359.97438 * 4 3 2 6 6 C 1.42892 * 117.00306 * 179.72744 * 5 4 3 7 7 C 1.50703 * 109.47367 * 179.97438 * 6 5 4 8 8 O 1.21281 * 119.99610 * 0.02562 * 7 6 5 9 9 N 1.34773 * 120.00273 * 179.97438 * 7 6 5 10 10 C 1.46497 * 120.00044 * 180.02562 * 9 7 6 11 11 H 1.08994 * 112.84993 * 23.80849 * 10 9 7 12 12 C 1.53788 * 113.61393 * 155.00553 * 10 9 7 13 13 C 1.53780 * 87.07921 * 89.11713 * 12 10 9 14 14 H 1.09000 * 113.61120 * 270.79810 * 13 12 10 15 15 C 1.50698 * 113.61321 * 139.98513 * 13 12 10 16 16 C 1.38214 * 119.97532 * 121.52366 * 15 13 12 17 17 C 1.38293 * 120.02113 * 180.02562 * 16 15 13 18 18 Br 1.89099 * 120.02487 * 179.97438 * 17 16 15 19 19 C 1.38527 * 119.95327 * 359.97438 * 17 16 15 20 20 F 1.35104 * 120.02662 * 180.02562 * 19 17 16 21 21 C 1.38455 * 119.94183 * 359.97438 * 19 17 16 22 22 C 1.38190 * 119.98214 * 0.26111 * 21 19 17 23 23 C 1.53779 * 87.17687 * 25.39106 * 13 12 10 24 24 C 1.38565 * 119.85217 * 179.72779 * 4 3 2 25 25 C 1.38240 * 120.00252 * 0.26974 * 24 4 3 26 26 N 1.48005 * 119.93034 * 180.02562 * 25 24 4 27 27 O 1.21799 * 119.99578 * 359.97438 * 26 25 24 28 28 O 1.21796 * 120.00257 * 180.02562 * 26 25 24 29 29 C 1.38257 * 120.14397 * 0.02562 * 25 24 4 30 30 C 1.50702 * 119.92566 * 179.97438 * 29 25 24 31 31 O 1.42905 * 109.46626 * 75.00201 * 30 29 25 32 32 Si 1.86294 * 109.47039 * 195.00212 * 30 29 25 33 33 C 1.38244 * 120.14887 * 359.97438 * 29 25 24 34 34 H 1.08999 * 109.47169 * 179.97438 * 1 2 3 35 35 H 1.08997 * 109.47021 * 300.00032 * 1 2 3 36 36 H 1.08995 * 109.47330 * 59.99710 * 1 2 3 37 37 H 1.09003 * 109.47003 * 60.00628 * 6 5 4 38 38 H 1.08996 * 109.47378 * 300.00357 * 6 5 4 39 39 H 0.96998 * 119.99860 * 0.02562 * 9 7 6 40 40 H 1.08996 * 113.61181 * 334.56580 * 12 10 9 41 41 H 1.08999 * 113.61342 * 203.66803 * 12 10 9 42 42 H 1.08004 * 119.98873 * 0.02562 * 16 15 13 43 43 H 1.08002 * 120.00555 * 179.97438 * 21 19 17 44 44 H 1.07997 * 119.97468 * 179.72271 * 22 21 19 45 45 H 1.08993 * 113.61093 * 89.15704 * 23 13 12 46 46 H 1.09000 * 113.61329 * 220.06120 * 23 13 12 47 47 H 1.08000 * 120.00005 * 180.25274 * 24 4 3 48 48 H 1.08998 * 109.47062 * 315.00330 * 30 29 25 49 49 H 0.96694 * 113.99652 * 60.00284 * 31 30 29 50 50 H 1.48500 * 110.00029 * 58.68763 * 32 30 29 51 51 H 1.48503 * 109.99715 * 180.02562 * 32 30 29 52 52 H 1.07998 * 119.99873 * 179.97438 * 33 29 25 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0464 1.2117 0.0000 4 6 3.4360 1.2863 -0.0005 5 8 4.1796 0.1477 -0.0005 6 6 5.6003 0.3007 -0.0072 7 6 6.2519 -1.0582 -0.0055 8 8 5.5670 -2.0591 0.0003 9 7 7.5957 -1.1612 -0.0115 10 6 8.2291 -2.4822 -0.0104 11 1 7.5816 -3.2623 -0.4105 12 6 9.6442 -2.4873 -0.6124 13 6 10.1620 -2.1790 0.8024 14 1 10.2206 -1.1132 1.0232 15 6 11.4249 -2.9205 1.1578 16 6 12.5612 -2.2184 1.5131 17 6 13.7208 -2.8979 1.8389 18 35 15.2757 -1.9374 2.3243 19 6 13.7424 -4.2827 1.8096 20 9 14.8743 -4.9480 2.1282 21 6 12.6028 -4.9843 1.4545 22 6 11.4469 -4.3026 1.1246 23 6 8.8839 -2.8490 1.3338 24 6 4.0603 2.5234 -0.0062 25 6 3.3029 3.6799 -0.0058 26 7 3.9714 5.0003 -0.0124 27 8 5.1876 5.0671 -0.0179 28 8 3.3055 6.0201 -0.0115 29 6 1.9224 3.6057 0.0010 30 6 1.1016 4.8696 0.0021 31 8 1.1285 5.4560 -1.3009 32 14 -0.6573 4.4674 0.4660 33 6 1.2932 2.3748 0.0067 34 1 -0.3633 -1.0277 -0.0005 35 1 -0.3633 0.5138 0.8900 36 1 -0.3634 0.5138 -0.8899 37 1 5.9104 0.8529 0.8800 38 1 5.9027 0.8480 -0.9000 39 1 8.1434 -0.3607 -0.0165 40 1 9.8179 -1.6820 -1.3261 41 1 9.9552 -3.4619 -0.9885 42 1 12.5435 -1.1388 1.5362 43 1 12.6187 -6.0640 1.4309 44 1 10.5594 -4.8499 0.8434 45 1 8.9867 -3.9226 1.4908 46 1 8.4449 -2.3352 2.1890 47 1 5.1385 2.5840 -0.0108 48 1 1.5166 5.5717 0.7252 49 1 0.7732 4.8857 -1.9962 50 1 -0.6956 3.8279 1.8057 51 1 -1.4772 5.7055 0.4700 52 1 0.2146 2.3197 0.0123 There are 82 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 82 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_9650940_4549636.mol2 52 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:57:25 Heat of formation + Delta-G solvation = -76.483536 kcal Electronic energy + Delta-G solvation = -43278.082833 eV Core-core repulsion = 37176.478848 eV Total energy + Delta-G solvation = -6101.603985 eV No. of doubly occupied orbitals = 82 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 511.061 amu Computer time = 1.22 seconds Orbital eigenvalues (eV) -50.08835 -43.39477 -42.12315 -41.62551 -40.63670 -39.69010 -39.21581 -38.64300 -37.72242 -37.12105 -34.74743 -33.43140 -32.67130 -32.55419 -31.90803 -30.38383 -29.67746 -28.73016 -27.90666 -26.67646 -26.19575 -25.68285 -24.15568 -23.92286 -23.23373 -22.70465 -21.97402 -20.77920 -20.19442 -19.83629 -19.50108 -18.94278 -18.73645 -18.66393 -18.31507 -17.82625 -17.72417 -17.61762 -17.35502 -17.03434 -16.86665 -16.83250 -16.58117 -16.37747 -16.08029 -15.76382 -15.66921 -15.45309 -15.26326 -14.91780 -14.69372 -14.68172 -14.39539 -14.37370 -14.18316 -13.93321 -13.87952 -13.76651 -13.47116 -13.42863 -13.26933 -13.01249 -12.66347 -12.48594 -12.43224 -12.37619 -12.32088 -12.26725 -12.21120 -12.11868 -12.03055 -11.77635 -11.57570 -11.46442 -11.22803 -11.07716 -10.52981 -10.45144 -10.16836 -10.03402 -9.60128 -9.48018 -5.13304 -1.35908 -0.42569 -0.19809 0.01083 0.16963 0.31247 0.43350 1.13266 1.24589 1.39204 1.57622 1.90552 1.90801 1.94304 2.29539 2.34639 2.98766 3.02555 3.18331 3.28130 3.42936 3.46712 3.48856 3.53238 3.56819 3.68060 3.70143 3.89283 3.92169 3.95035 3.99406 4.03257 4.06805 4.10285 4.12389 4.15752 4.23410 4.40403 4.42829 4.51177 4.55685 4.63593 4.74189 4.79002 4.79317 4.83375 4.84187 4.85923 4.94110 5.03859 5.08452 5.15075 5.25692 5.34594 5.55503 5.62922 5.64363 6.07133 6.40199 6.47113 6.72041 7.09319 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.005 4.005 2 O -0.307 6.307 3 C 0.171 3.829 4 C 0.101 3.899 5 O -0.290 6.290 6 C 0.025 3.975 7 C 0.520 3.480 8 O -0.564 6.564 9 N -0.693 5.693 10 C 0.115 3.885 11 H 0.089 0.911 12 C -0.124 4.124 13 C -0.065 4.065 14 H 0.119 0.881 15 C -0.070 4.070 16 C -0.062 4.062 17 C -0.143 4.143 18 Br -0.043 7.043 19 C 0.094 3.906 20 F -0.141 7.141 21 C -0.145 4.145 22 C -0.069 4.069 23 C -0.143 4.143 24 C -0.109 4.109 25 C -0.047 4.047 26 N 0.036 4.964 27 O -0.185 6.185 28 O -0.168 6.168 29 C -0.040 4.040 30 C -0.091 4.091 31 O -0.536 6.536 32 Si 0.786 3.214 33 C -0.163 4.163 34 H 0.121 0.879 35 H 0.079 0.921 36 H 0.093 0.907 37 H 0.127 0.873 38 H 0.129 0.871 39 H 0.421 0.579 40 H 0.092 0.908 41 H 0.106 0.894 42 H 0.156 0.844 43 H 0.159 0.841 44 H 0.165 0.835 45 H 0.102 0.898 46 H 0.071 0.929 47 H 0.184 0.816 48 H 0.114 0.886 49 H 0.393 0.607 50 H -0.272 1.272 51 H -0.291 1.291 52 H 0.193 0.807 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -5.912 -3.918 -3.011 7.705 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.098 4.098 2 O -0.218 6.218 3 C 0.122 3.878 4 C 0.054 3.946 5 O -0.202 6.202 6 C -0.053 4.053 7 C 0.306 3.694 8 O -0.442 6.442 9 N -0.347 5.347 10 C 0.010 3.990 11 H 0.107 0.893 12 C -0.162 4.162 13 C -0.084 4.084 14 H 0.137 0.863 15 C -0.071 4.071 16 C -0.082 4.082 17 C -0.224 4.224 18 Br 0.042 6.958 19 C 0.073 3.927 20 F -0.119 7.119 21 C -0.164 4.164 22 C -0.087 4.087 23 C -0.181 4.181 24 C -0.129 4.129 25 C -0.131 4.131 26 N 0.549 4.451 27 O -0.396 6.396 28 O -0.381 6.381 29 C -0.042 4.042 30 C -0.199 4.199 31 O -0.343 6.343 32 Si 0.689 3.311 33 C -0.182 4.182 34 H 0.140 0.860 35 H 0.098 0.902 36 H 0.112 0.888 37 H 0.145 0.855 38 H 0.147 0.853 39 H 0.259 0.741 40 H 0.110 0.890 41 H 0.125 0.875 42 H 0.174 0.826 43 H 0.177 0.823 44 H 0.183 0.817 45 H 0.121 0.879 46 H 0.090 0.910 47 H 0.201 0.799 48 H 0.132 0.868 49 H 0.242 0.758 50 H -0.198 1.198 51 H -0.218 1.218 52 H 0.210 0.790 Dipole moment (debyes) X Y Z Total from point charges -6.417 -4.706 -1.929 8.188 hybrid contribution 1.519 0.923 0.435 1.830 sum -4.898 -3.783 -1.494 6.367 Atomic orbital electron populations 1.23818 0.74694 1.07103 1.04193 1.86332 1.24849 1.24476 1.86171 1.18677 0.89184 0.86371 0.93530 1.17950 0.88803 0.85108 1.02756 1.86299 1.18487 1.26741 1.88707 1.22928 0.78816 0.96209 1.07298 1.20261 0.83063 0.90311 0.75780 1.90787 1.63901 1.39738 1.49724 1.45358 1.05016 1.09902 1.74406 1.21922 0.94264 0.85084 0.97757 0.89288 1.23422 0.92213 1.04740 0.95823 1.21664 0.89358 1.00339 0.96998 0.86279 1.19947 0.94927 0.93708 0.98497 1.21163 0.89650 1.01424 0.95931 1.22130 0.95947 0.92973 1.11328 1.96801 1.34034 1.73457 1.91485 1.17792 0.83988 0.88985 1.01924 1.91531 1.49488 1.80590 1.90301 1.21427 0.91241 1.02180 1.01533 1.21352 0.97892 0.93860 0.95580 1.23629 0.94799 1.02382 0.97298 1.20906 1.03020 0.88118 1.00868 1.20565 0.92769 0.81926 1.17840 1.43724 1.00820 1.03453 0.97141 1.94499 0.96525 1.94126 1.54468 1.94580 1.64414 1.25444 1.53667 1.20222 0.91084 0.97647 0.95291 1.25761 1.10571 0.92824 0.90787 1.86671 1.86990 1.44622 1.16028 0.94402 0.71827 0.82186 0.82732 1.21080 1.01765 0.88110 1.07215 0.86039 0.90204 0.88818 0.85524 0.85330 0.74065 0.88964 0.87543 0.82594 0.82301 0.81734 0.87944 0.91045 0.79891 0.86846 0.75806 1.19768 1.21814 0.79014 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.00 0.05 9.81 113.37 1.11 1.17 16 2 O -0.31 0.47 10.28 -79.59 -0.82 -0.35 16 3 C 0.17 -0.39 6.70 22.57 0.15 -0.23 16 4 C 0.10 -0.08 6.70 22.57 0.15 0.07 16 5 O -0.29 -0.43 9.45 -67.04 -0.63 -1.06 16 6 C 0.03 -0.16 5.22 71.24 0.37 0.21 16 7 C 0.52 -0.77 7.91 87.66 0.69 -0.08 16 8 O -0.56 -5.52 16.10 16.01 0.26 -5.26 16 9 N -0.69 5.94 5.26 -439.75 -2.31 3.63 16 10 C 0.12 -0.85 4.33 45.58 0.20 -0.66 16 11 H 0.09 -0.22 7.46 -2.39 -0.02 -0.24 16 12 C -0.12 1.41 7.29 31.12 0.23 1.63 16 13 C -0.07 0.71 3.85 -11.02 -0.04 0.66 16 14 H 0.12 -1.62 8.08 -2.39 -0.02 -1.64 16 15 C -0.07 0.46 5.29 -19.86 -0.11 0.36 16 16 C -0.06 0.21 9.45 22.28 0.21 0.42 16 17 C -0.14 -0.26 6.23 22.35 0.14 -0.12 16 18 Br -0.04 -0.17 33.28 -20.37 -0.68 -0.84 16 19 C 0.09 0.27 7.27 22.39 0.16 0.43 16 20 F -0.14 -0.98 16.73 44.97 0.75 -0.22 16 21 C -0.14 0.38 10.03 22.31 0.22 0.61 16 22 C -0.07 0.46 8.53 22.27 0.19 0.65 16 23 C -0.14 1.22 7.27 31.18 0.23 1.45 16 24 C -0.11 0.20 8.54 22.35 0.19 0.39 16 25 C -0.05 -0.11 6.85 36.38 0.25 0.14 16 26 N 0.04 0.31 4.45 -46.46 -0.21 0.11 16 27 O -0.19 -1.80 18.44 18.89 0.35 -1.45 16 28 O -0.17 -2.06 14.62 25.11 0.37 -1.70 16 29 C -0.04 0.06 5.26 -19.86 -0.10 -0.05 16 30 C -0.09 0.04 1.74 71.24 0.12 0.17 16 31 O -0.54 -0.34 11.80 -129.62 -1.53 -1.87 16 32 Si 0.79 -4.57 29.91 68.60 2.05 -2.52 16 33 C -0.16 1.00 7.65 22.35 0.17 1.17 16 34 H 0.12 -1.52 8.14 -2.39 -0.02 -1.54 16 35 H 0.08 -1.11 7.65 -2.39 -0.02 -1.13 16 36 H 0.09 -1.51 7.68 -2.39 -0.02 -1.53 16 37 H 0.13 -1.54 7.66 -2.39 -0.02 -1.56 16 38 H 0.13 -1.59 7.66 -2.39 -0.02 -1.61 16 39 H 0.42 -6.52 8.70 -92.71 -0.81 -7.33 16 40 H 0.09 -1.17 8.14 -2.39 -0.02 -1.19 16 41 H 0.11 -1.24 7.62 -2.39 -0.02 -1.26 16 42 H 0.16 -1.07 8.05 -2.91 -0.02 -1.09 16 43 H 0.16 -0.95 8.06 -2.91 -0.02 -0.97 16 44 H 0.17 -1.91 6.72 -2.91 -0.02 -1.93 16 45 H 0.10 -0.96 6.40 -2.39 -0.02 -0.97 16 46 H 0.07 -0.46 8.14 -2.39 -0.02 -0.48 16 47 H 0.18 -1.20 5.85 -2.91 -0.02 -1.22 16 48 H 0.11 0.50 6.07 -2.39 -0.01 0.49 16 49 H 0.39 -3.69 8.70 -74.06 -0.64 -4.34 16 50 H -0.27 0.67 7.11 99.48 0.71 1.38 16 51 H -0.29 -0.69 7.11 99.48 0.71 0.02 16 52 H 0.19 -2.56 3.36 -2.91 -0.01 -2.57 16 Total: 0.00 -35.67 460.61 1.79 -33.88 By element: Atomic # 1 Polarization: -30.37 SS G_CDS: -0.35 Total: -30.71 kcal Atomic # 6 Polarization: 3.84 SS G_CDS: 4.54 Total: 8.38 kcal Atomic # 7 Polarization: 6.26 SS G_CDS: -2.52 Total: 3.74 kcal Atomic # 8 Polarization: -9.68 SS G_CDS: -2.01 Total: -11.69 kcal Atomic # 9 Polarization: -0.98 SS G_CDS: 0.75 Total: -0.22 kcal Atomic # 14 Polarization: -4.57 SS G_CDS: 2.05 Total: -2.52 kcal Atomic # 35 Polarization: -0.17 SS G_CDS: -0.68 Total: -0.84 kcal Total: -35.67 1.79 -33.88 kcal The number of atoms in the molecule is 52 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9650940_4549636.mol2 52 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -42.608 kcal (2) G-P(sol) polarization free energy of solvation -35.667 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -78.274 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.791 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -33.876 kcal (6) G-S(sol) free energy of system = (1) + (5) -76.484 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.22 seconds