Wall clock time and date at job start Tue Mar 9 2021 12:57:49 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42893 * 1 3 3 C 1.35986 * 117.00346 * 2 1 4 4 C 1.38667 * 120.00413 * 180.02562 * 3 2 1 5 5 C 1.38157 * 120.00159 * 180.02562 * 4 3 2 6 6 C 1.50701 * 120.00056 * 180.02562 * 5 4 3 7 7 O 1.42896 * 109.47106 * 104.97963 * 6 5 4 8 8 Si 1.86303 * 109.46984 * 344.97722 * 6 5 4 9 9 C 1.38677 * 119.99980 * 0.02562 * 5 4 3 10 10 O 1.35978 * 120.00004 * 180.02562 * 9 5 4 11 11 C 1.42896 * 117.00039 * 179.97438 * 10 9 5 12 12 C 1.50700 * 109.47293 * 179.97438 * 11 10 9 13 13 O 1.21279 * 120.00113 * 0.02562 * 12 11 10 14 14 N 1.34784 * 119.99961 * 179.97438 * 12 11 10 15 15 C 1.46494 * 119.99635 * 180.02562 * 14 12 11 16 16 H 1.08995 * 112.85546 * 23.80497 * 15 14 12 17 17 C 1.53782 * 113.61176 * 155.00482 * 15 14 12 18 18 C 1.53779 * 87.08415 * 89.11507 * 17 15 14 19 19 H 1.08998 * 113.61131 * 270.88162 * 18 17 15 20 20 C 1.50697 * 113.61203 * 140.06550 * 18 17 15 21 21 C 1.38216 * 119.96877 * 120.00027 * 20 18 17 22 22 C 1.38298 * 120.01745 * 179.97438 * 21 20 18 23 23 Br 1.89097 * 120.02475 * 179.97438 * 22 21 20 24 24 C 1.38520 * 119.95738 * 0.02672 * 22 21 20 25 25 F 1.35092 * 120.03457 * 179.97438 * 24 22 21 26 26 C 1.38464 * 119.93785 * 359.97438 * 24 22 21 27 27 C 1.38188 * 119.98169 * 359.72786 * 26 24 22 28 28 C 1.53783 * 87.07964 * 25.43304 * 18 17 15 29 29 C 1.38715 * 119.99641 * 0.27543 * 9 5 4 30 30 C 1.38113 * 120.00138 * 359.44681 * 29 9 5 31 31 H 1.08998 * 109.47190 * 179.97438 * 1 2 3 32 32 H 1.09007 * 109.47273 * 299.99740 * 1 2 3 33 33 H 1.09000 * 109.47117 * 59.99640 * 1 2 3 34 34 H 1.08005 * 119.99887 * 0.04662 * 4 3 2 35 35 H 1.08999 * 109.47399 * 224.97895 * 6 5 4 36 36 H 0.96702 * 114.00241 * 59.99715 * 7 6 5 37 37 H 1.48502 * 109.99754 * 178.67811 * 8 6 5 38 38 H 1.48497 * 110.00096 * 299.99898 * 8 6 5 39 39 H 1.09004 * 109.47379 * 59.99704 * 11 10 9 40 40 H 1.08997 * 109.47194 * 300.00213 * 11 10 9 41 41 H 0.96995 * 120.00015 * 359.72695 * 14 12 11 42 42 H 1.09009 * 113.61196 * 203.66403 * 17 15 14 43 43 H 1.08999 * 113.61212 * 334.47478 * 17 15 14 44 44 H 1.07999 * 119.99288 * 359.97438 * 21 20 18 45 45 H 1.08001 * 120.00522 * 180.02562 * 26 24 22 46 46 H 1.07999 * 119.97587 * 180.29373 * 27 26 24 47 47 H 1.09003 * 113.60957 * 220.02254 * 28 18 17 48 48 H 1.08998 * 113.61171 * 89.12181 * 28 18 17 49 49 H 1.08009 * 119.99964 * 179.70253 * 29 9 5 50 50 H 1.08005 * 119.99941 * 180.25090 * 30 29 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4289 0.0000 0.0000 3 6 2.0464 1.2116 0.0000 4 6 3.4311 1.2842 -0.0005 5 6 4.0584 2.5152 0.0000 6 6 5.5633 2.5940 -0.0012 7 8 6.0197 2.9678 -1.3027 8 14 6.2726 0.9320 0.4521 9 6 3.3031 3.6782 0.0016 10 8 3.9204 4.8898 0.0016 11 6 3.0805 6.0459 0.0027 12 6 3.9347 7.2874 0.0032 13 8 5.1437 7.1917 0.0021 14 7 3.3551 8.5042 0.0038 15 6 4.1855 9.7111 0.0036 16 1 5.1823 9.5390 -0.4023 17 6 3.4822 10.9426 -0.5912 18 6 2.9647 11.2344 0.8272 19 1 2.0131 10.7529 1.0524 20 6 2.9793 12.6980 1.1858 21 6 1.8009 13.3391 1.5185 22 6 1.8132 14.6822 1.8483 23 35 0.2010 15.5597 2.3028 24 6 3.0072 15.3845 1.8444 25 9 3.0209 16.6965 2.1658 26 6 4.1866 14.7404 1.5108 27 6 4.1723 13.3969 1.1877 28 6 4.1862 10.4585 1.3476 29 6 1.9179 3.6056 0.0085 30 6 1.2908 2.3750 0.0021 31 1 -0.3633 -1.0276 -0.0005 32 1 -0.3634 0.5138 0.8901 33 1 -0.3633 0.5139 -0.8899 34 1 4.0194 0.3784 -0.0017 35 1 5.8888 3.3383 0.7256 36 1 5.6888 3.8249 -1.6044 37 1 7.7563 0.9881 0.4234 38 1 5.8054 0.5319 1.8037 39 1 2.4519 6.0374 0.8932 40 1 2.4506 6.0381 -0.8867 41 1 2.3881 8.5808 -0.0002 42 1 4.1708 11.6985 -0.9689 43 1 2.6945 10.6944 -1.3025 44 1 0.8703 12.7912 1.5210 45 1 5.1182 15.2868 1.5079 46 1 5.0930 12.8935 0.9321 47 1 3.9656 9.8194 2.2027 48 1 5.0671 11.0821 1.5000 49 1 1.3296 4.5114 0.0146 50 1 0.2123 2.3185 0.0034 There are 74 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 74 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_9650940_4974302.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:57:49 Heat of formation + Delta-G solvation = -91.817841 kcal Electronic energy + Delta-G solvation = -36410.111989 eV Core-core repulsion = 31138.859494 eV Total energy + Delta-G solvation = -5271.252494 eV No. of doubly occupied orbitals = 74 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 466.067 amu Computer time = 0.83 seconds Orbital eigenvalues (eV) -50.04178 -42.01270 -41.66825 -40.66168 -39.91525 -38.91157 -37.96914 -36.85443 -34.84980 -33.51764 -32.81285 -32.12790 -31.09390 -30.37738 -29.46437 -28.11603 -27.01189 -26.51649 -26.26901 -24.30016 -23.91250 -22.82784 -22.42728 -21.97876 -20.44083 -19.57327 -19.02146 -18.84640 -18.54767 -17.94877 -17.79588 -17.64907 -17.49877 -17.18687 -16.83314 -16.81322 -16.71431 -16.06095 -15.92921 -15.76270 -15.56734 -15.48391 -15.30614 -14.99898 -14.84138 -14.49539 -14.43856 -14.30903 -14.16147 -14.02241 -13.97574 -13.72517 -13.65871 -13.51713 -13.37701 -13.11022 -12.69838 -12.56804 -12.28786 -12.26007 -12.22629 -11.88409 -11.76444 -11.61582 -11.55017 -11.34511 -11.18648 -11.06537 -10.96336 -10.34387 -10.14938 -10.09599 -9.70222 -8.84915 -4.75852 -0.30462 -0.13427 0.05037 0.32210 0.39902 1.27010 1.32409 1.51949 1.77453 2.12934 2.14204 2.23162 2.40899 2.53637 2.93631 3.13478 3.26688 3.29082 3.39914 3.48537 3.51467 3.60859 3.62578 3.68572 3.77470 3.77998 3.83297 3.93742 3.97222 4.06124 4.08919 4.09695 4.15765 4.31390 4.31484 4.34863 4.41129 4.44595 4.51848 4.56605 4.61419 4.62697 4.66504 4.67758 4.74337 4.83818 4.88257 5.00199 5.07903 5.14525 5.16101 5.32267 5.38124 5.48102 6.01483 6.18836 6.35809 6.72345 6.93587 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.026 3.974 2 O -0.313 6.313 3 C 0.104 3.896 4 C -0.103 4.103 5 C -0.098 4.098 6 C -0.072 4.072 7 O -0.533 6.533 8 Si 0.743 3.257 9 C 0.099 3.901 10 O -0.290 6.290 11 C 0.041 3.959 12 C 0.519 3.481 13 O -0.508 6.508 14 N -0.711 5.711 15 C 0.121 3.879 16 H 0.109 0.891 17 C -0.135 4.135 18 C -0.073 4.073 19 H 0.102 0.898 20 C -0.077 4.077 21 C -0.059 4.059 22 C -0.129 4.129 23 Br -0.026 7.026 24 C 0.124 3.876 25 F -0.123 7.123 26 C -0.143 4.143 27 C -0.073 4.073 28 C -0.144 4.144 29 C -0.165 4.165 30 C -0.165 4.165 31 H 0.103 0.897 32 H 0.055 0.945 33 H 0.056 0.944 34 H 0.147 0.853 35 H 0.078 0.922 36 H 0.368 0.632 37 H -0.254 1.254 38 H -0.251 1.251 39 H 0.094 0.906 40 H 0.095 0.905 41 H 0.403 0.597 42 H 0.102 0.898 43 H 0.081 0.919 44 H 0.142 0.858 45 H 0.147 0.853 46 H 0.142 0.858 47 H 0.078 0.922 48 H 0.098 0.902 49 H 0.133 0.867 50 H 0.135 0.865 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -6.111 -1.116 -1.512 6.394 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.069 4.069 2 O -0.227 6.227 3 C 0.059 3.941 4 C -0.121 4.121 5 C -0.099 4.099 6 C -0.180 4.180 7 O -0.338 6.338 8 Si 0.641 3.359 9 C 0.054 3.946 10 O -0.203 6.203 11 C -0.038 4.038 12 C 0.304 3.696 13 O -0.381 6.381 14 N -0.365 5.365 15 C 0.016 3.984 16 H 0.127 0.873 17 C -0.173 4.173 18 C -0.091 4.091 19 H 0.120 0.880 20 C -0.078 4.078 21 C -0.079 4.079 22 C -0.210 4.210 23 Br 0.059 6.941 24 C 0.102 3.898 25 F -0.101 7.101 26 C -0.162 4.162 27 C -0.091 4.091 28 C -0.183 4.183 29 C -0.184 4.184 30 C -0.184 4.184 31 H 0.122 0.878 32 H 0.074 0.926 33 H 0.075 0.925 34 H 0.164 0.836 35 H 0.096 0.904 36 H 0.216 0.784 37 H -0.179 1.179 38 H -0.175 1.175 39 H 0.112 0.888 40 H 0.113 0.887 41 H 0.238 0.762 42 H 0.120 0.880 43 H 0.099 0.901 44 H 0.160 0.840 45 H 0.165 0.835 46 H 0.159 0.841 47 H 0.096 0.904 48 H 0.116 0.884 49 H 0.151 0.849 50 H 0.153 0.847 Dipole moment (debyes) X Y Z Total from point charges -4.729 -1.978 -0.724 5.177 hybrid contribution -1.312 2.286 0.402 2.666 sum -6.041 0.308 -0.322 6.057 Atomic orbital electron populations 1.23104 0.78047 1.04421 1.01321 1.86116 1.21556 1.26168 1.88860 1.18814 0.91914 0.84587 0.98810 1.20062 0.91646 0.96785 1.03594 1.19484 0.96621 0.90024 1.03785 1.25365 0.91483 1.12359 0.88813 1.86710 1.73809 1.41891 1.31434 0.93016 0.79794 0.80248 0.82825 1.18646 0.90822 0.84539 1.00590 1.86108 1.33848 1.11066 1.89310 1.22437 0.93139 0.84101 1.04093 1.20031 0.88845 0.84106 0.76622 1.90798 1.14130 1.86439 1.46740 1.45469 1.10214 1.04614 1.76185 1.21859 0.96188 0.83257 0.97085 0.87256 1.23456 1.00913 0.97073 0.95837 1.21622 0.99825 0.90673 0.97003 0.87961 1.19729 0.92506 0.95793 0.99773 1.20930 0.99185 0.91422 0.96355 1.22003 0.92004 0.96690 1.10295 1.96833 1.26889 1.78291 1.92055 1.17445 0.93399 0.78831 1.00087 1.91581 1.97109 1.31700 1.89743 1.21205 0.97170 0.95692 1.02147 1.21049 0.98477 0.92906 0.96670 1.23601 0.98082 0.98591 0.98009 1.21014 0.92804 0.98691 1.05862 1.21087 1.00341 0.91509 1.05460 0.87846 0.92617 0.92531 0.83625 0.90409 0.78391 1.17885 1.17523 0.88832 0.88669 0.76240 0.88010 0.90083 0.84047 0.83539 0.84064 0.90350 0.88352 0.84921 0.84687 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.07 9.81 101.05 0.99 0.93 16 2 O -0.31 -0.31 10.50 -19.70 -0.21 -0.52 16 3 C 0.10 0.12 6.69 -39.25 -0.26 -0.14 16 4 C -0.10 -0.16 8.59 -39.45 -0.34 -0.50 16 5 C -0.10 -0.21 5.27 -104.49 -0.55 -0.76 16 6 C -0.07 -0.19 2.33 36.01 0.08 -0.11 16 7 O -0.53 -1.87 12.65 -35.23 -0.45 -2.32 16 8 Si 0.74 1.15 30.17 -169.99 -5.13 -3.98 16 9 C 0.10 0.12 6.62 -39.24 -0.26 -0.14 16 10 O -0.29 -0.40 8.56 -39.58 -0.34 -0.74 16 11 C 0.04 -0.10 5.22 36.01 0.19 0.09 16 12 C 0.52 -0.20 7.91 -10.98 -0.09 -0.29 16 13 O -0.51 -2.34 16.10 -14.35 -0.23 -2.57 16 14 N -0.71 2.57 5.26 -53.02 -0.28 2.29 16 15 C 0.12 -0.38 4.32 -67.12 -0.29 -0.67 16 16 H 0.11 -0.12 7.46 -51.93 -0.39 -0.51 16 17 C -0.13 0.63 7.29 -25.92 -0.19 0.44 16 18 C -0.07 0.32 3.85 -90.96 -0.35 -0.03 16 19 H 0.10 -0.56 8.09 -51.93 -0.42 -0.98 16 20 C -0.08 0.20 5.29 -104.62 -0.55 -0.35 16 21 C -0.06 0.09 9.45 -39.57 -0.37 -0.29 16 22 C -0.13 -0.07 6.23 -39.46 -0.25 -0.32 16 23 Br -0.03 -0.03 33.28 -68.01 -2.26 -2.30 16 24 C 0.12 0.12 7.27 -39.39 -0.29 -0.16 16 25 F -0.12 -0.32 16.73 2.25 0.04 -0.29 16 26 C -0.14 0.17 10.03 -39.52 -0.40 -0.23 16 27 C -0.07 0.19 8.62 -39.59 -0.34 -0.15 16 28 C -0.14 0.51 7.25 -25.92 -0.19 0.32 16 29 C -0.16 0.12 9.03 -39.45 -0.36 -0.23 16 30 C -0.17 0.07 9.03 -39.45 -0.36 -0.28 16 31 H 0.10 -0.40 8.14 -51.93 -0.42 -0.82 16 32 H 0.06 -0.19 7.66 -51.92 -0.40 -0.59 16 33 H 0.06 -0.19 7.66 -51.93 -0.40 -0.59 16 34 H 0.15 0.00 5.13 -52.48 -0.27 -0.27 16 35 H 0.08 0.27 7.82 -51.93 -0.41 -0.14 16 36 H 0.37 0.76 8.60 45.56 0.39 1.15 16 37 H -0.25 -1.09 7.11 56.52 0.40 -0.69 16 38 H -0.25 -0.68 7.11 56.52 0.40 -0.28 16 39 H 0.09 -0.44 7.65 -51.93 -0.40 -0.83 16 40 H 0.10 -0.47 7.67 -51.93 -0.40 -0.87 16 41 H 0.40 -2.69 8.70 -40.82 -0.36 -3.04 16 42 H 0.10 -0.48 7.73 -51.92 -0.40 -0.88 16 43 H 0.08 -0.41 8.14 -51.93 -0.42 -0.84 16 44 H 0.14 -0.43 8.05 -52.49 -0.42 -0.86 16 45 H 0.15 -0.40 8.06 -52.49 -0.42 -0.83 16 46 H 0.14 -0.66 6.64 -52.49 -0.35 -1.01 16 47 H 0.08 -0.20 8.14 -51.93 -0.42 -0.62 16 48 H 0.10 -0.38 6.30 -51.93 -0.33 -0.71 16 49 H 0.13 -0.50 6.29 -52.48 -0.33 -0.83 16 50 H 0.14 -0.37 6.29 -52.48 -0.33 -0.70 16 LS Contribution 437.83 15.07 6.60 6.60 Total: 0.00 -9.91 437.83 -12.51 -22.42 By element: Atomic # 1 Polarization: -9.64 SS G_CDS: -6.09 Total: -15.73 kcal Atomic # 6 Polarization: 1.30 SS G_CDS: -4.16 Total: -2.86 kcal Atomic # 7 Polarization: 2.57 SS G_CDS: -0.28 Total: 2.29 kcal Atomic # 8 Polarization: -4.92 SS G_CDS: -1.22 Total: -6.15 kcal Atomic # 9 Polarization: -0.32 SS G_CDS: 0.04 Total: -0.29 kcal Atomic # 14 Polarization: 1.15 SS G_CDS: -5.13 Total: -3.98 kcal Atomic # 35 Polarization: -0.03 SS G_CDS: -2.26 Total: -2.30 kcal Total LS contribution 6.60 Total: 6.60 kcal Total: -9.91 -12.51 -22.42 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9650940_4974302.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -69.401 kcal (2) G-P(sol) polarization free energy of solvation -9.909 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -79.310 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.508 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.417 kcal (6) G-S(sol) free energy of system = (1) + (5) -91.818 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.83 seconds