Wall clock time and date at job start Tue Mar 9 2021 12:57:48 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42893 * 1 3 3 C 1.35986 * 117.00346 * 2 1 4 4 C 1.38667 * 120.00413 * 180.02562 * 3 2 1 5 5 C 1.38157 * 120.00159 * 180.02562 * 4 3 2 6 6 C 1.50701 * 120.00056 * 180.02562 * 5 4 3 7 7 O 1.42896 * 109.47106 * 104.97963 * 6 5 4 8 8 Si 1.86303 * 109.46984 * 344.97722 * 6 5 4 9 9 C 1.38677 * 119.99980 * 0.02562 * 5 4 3 10 10 O 1.35978 * 120.00004 * 180.02562 * 9 5 4 11 11 C 1.42896 * 117.00039 * 179.97438 * 10 9 5 12 12 C 1.50700 * 109.47293 * 179.97438 * 11 10 9 13 13 O 1.21279 * 120.00113 * 0.02562 * 12 11 10 14 14 N 1.34784 * 119.99961 * 179.97438 * 12 11 10 15 15 C 1.46494 * 119.99635 * 180.02562 * 14 12 11 16 16 H 1.08995 * 112.85546 * 23.80497 * 15 14 12 17 17 C 1.53782 * 113.61176 * 155.00482 * 15 14 12 18 18 C 1.53779 * 87.08415 * 89.11507 * 17 15 14 19 19 H 1.08998 * 113.61131 * 270.88162 * 18 17 15 20 20 C 1.50697 * 113.61203 * 140.06550 * 18 17 15 21 21 C 1.38216 * 119.96877 * 120.00027 * 20 18 17 22 22 C 1.38298 * 120.01745 * 179.97438 * 21 20 18 23 23 Br 1.89097 * 120.02475 * 179.97438 * 22 21 20 24 24 C 1.38520 * 119.95738 * 0.02672 * 22 21 20 25 25 F 1.35092 * 120.03457 * 179.97438 * 24 22 21 26 26 C 1.38464 * 119.93785 * 359.97438 * 24 22 21 27 27 C 1.38188 * 119.98169 * 359.72786 * 26 24 22 28 28 C 1.53783 * 87.07964 * 25.43304 * 18 17 15 29 29 C 1.38715 * 119.99641 * 0.27543 * 9 5 4 30 30 C 1.38113 * 120.00138 * 359.44681 * 29 9 5 31 31 H 1.08998 * 109.47190 * 179.97438 * 1 2 3 32 32 H 1.09007 * 109.47273 * 299.99740 * 1 2 3 33 33 H 1.09000 * 109.47117 * 59.99640 * 1 2 3 34 34 H 1.08005 * 119.99887 * 0.04662 * 4 3 2 35 35 H 1.08999 * 109.47399 * 224.97895 * 6 5 4 36 36 H 0.96702 * 114.00241 * 59.99715 * 7 6 5 37 37 H 1.48502 * 109.99754 * 178.67811 * 8 6 5 38 38 H 1.48497 * 110.00096 * 299.99898 * 8 6 5 39 39 H 1.09004 * 109.47379 * 59.99704 * 11 10 9 40 40 H 1.08997 * 109.47194 * 300.00213 * 11 10 9 41 41 H 0.96995 * 120.00015 * 359.72695 * 14 12 11 42 42 H 1.09009 * 113.61196 * 203.66403 * 17 15 14 43 43 H 1.08999 * 113.61212 * 334.47478 * 17 15 14 44 44 H 1.07999 * 119.99288 * 359.97438 * 21 20 18 45 45 H 1.08001 * 120.00522 * 180.02562 * 26 24 22 46 46 H 1.07999 * 119.97587 * 180.29373 * 27 26 24 47 47 H 1.09003 * 113.60957 * 220.02254 * 28 18 17 48 48 H 1.08998 * 113.61171 * 89.12181 * 28 18 17 49 49 H 1.08009 * 119.99964 * 179.70253 * 29 9 5 50 50 H 1.08005 * 119.99941 * 180.25090 * 30 29 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4289 0.0000 0.0000 3 6 2.0464 1.2116 0.0000 4 6 3.4311 1.2842 -0.0005 5 6 4.0584 2.5152 0.0000 6 6 5.5633 2.5940 -0.0012 7 8 6.0197 2.9678 -1.3027 8 14 6.2726 0.9320 0.4521 9 6 3.3031 3.6782 0.0016 10 8 3.9204 4.8898 0.0016 11 6 3.0805 6.0459 0.0027 12 6 3.9347 7.2874 0.0032 13 8 5.1437 7.1917 0.0021 14 7 3.3551 8.5042 0.0038 15 6 4.1855 9.7111 0.0036 16 1 5.1823 9.5390 -0.4023 17 6 3.4822 10.9426 -0.5912 18 6 2.9647 11.2344 0.8272 19 1 2.0131 10.7529 1.0524 20 6 2.9793 12.6980 1.1858 21 6 1.8009 13.3391 1.5185 22 6 1.8132 14.6822 1.8483 23 35 0.2010 15.5597 2.3028 24 6 3.0072 15.3845 1.8444 25 9 3.0209 16.6965 2.1658 26 6 4.1866 14.7404 1.5108 27 6 4.1723 13.3969 1.1877 28 6 4.1862 10.4585 1.3476 29 6 1.9179 3.6056 0.0085 30 6 1.2908 2.3750 0.0021 31 1 -0.3633 -1.0276 -0.0005 32 1 -0.3634 0.5138 0.8901 33 1 -0.3633 0.5139 -0.8899 34 1 4.0194 0.3784 -0.0017 35 1 5.8888 3.3383 0.7256 36 1 5.6888 3.8249 -1.6044 37 1 7.7563 0.9881 0.4234 38 1 5.8054 0.5319 1.8037 39 1 2.4519 6.0374 0.8932 40 1 2.4506 6.0381 -0.8867 41 1 2.3881 8.5808 -0.0002 42 1 4.1708 11.6985 -0.9689 43 1 2.6945 10.6944 -1.3025 44 1 0.8703 12.7912 1.5210 45 1 5.1182 15.2868 1.5079 46 1 5.0930 12.8935 0.9321 47 1 3.9656 9.8194 2.2027 48 1 5.0671 11.0821 1.5000 49 1 1.3296 4.5114 0.0146 50 1 0.2123 2.3185 0.0034 There are 74 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 74 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_9650940_4974302.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:57:48 Heat of formation + Delta-G solvation = -89.592987 kcal Electronic energy + Delta-G solvation = -36410.015512 eV Core-core repulsion = 31138.859494 eV Total energy + Delta-G solvation = -5271.156018 eV No. of doubly occupied orbitals = 74 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 466.067 amu Computer time = 0.89 seconds Orbital eigenvalues (eV) -50.10137 -41.89944 -41.53281 -40.57378 -39.84015 -38.80103 -38.04615 -36.91828 -34.74075 -33.43952 -32.80787 -31.99386 -31.00008 -30.31029 -29.31920 -27.95097 -26.69654 -26.58747 -26.06535 -24.16735 -23.84618 -22.68488 -22.40576 -21.86679 -20.21703 -19.52267 -18.94435 -18.79930 -18.46151 -18.05429 -17.70236 -17.56308 -17.41314 -17.04420 -16.87425 -16.64497 -16.59105 -16.09522 -15.78431 -15.66014 -15.50469 -15.43554 -15.34160 -14.88497 -14.69978 -14.47185 -14.39742 -14.20192 -14.15782 -14.07279 -13.77398 -13.54715 -13.51715 -13.38292 -13.26152 -13.02770 -12.50641 -12.38874 -12.30242 -12.12809 -12.05186 -12.01939 -11.59001 -11.47137 -11.43499 -11.30325 -11.24110 -11.22686 -10.99887 -10.16735 -10.08811 -10.04406 -9.61405 -8.81366 -4.93259 -0.20977 -0.00149 0.07338 0.34261 0.42299 1.33907 1.42306 1.44288 1.58346 1.91576 2.28268 2.35843 2.55013 2.57985 3.01458 3.41700 3.46494 3.49307 3.55558 3.66906 3.68850 3.74967 3.86517 3.91276 3.96224 4.01578 4.08753 4.09501 4.10176 4.14433 4.14773 4.21952 4.28576 4.45660 4.46439 4.49974 4.62249 4.71183 4.76724 4.77969 4.80628 4.83041 4.84558 4.93167 4.98149 5.01927 5.07223 5.13043 5.13866 5.21745 5.34001 5.42619 5.58397 5.62902 6.13931 6.41729 6.47307 6.53400 7.12328 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.017 3.983 2 O -0.334 6.334 3 C 0.090 3.910 4 C -0.119 4.119 5 C -0.119 4.119 6 C -0.080 4.080 7 O -0.545 6.545 8 Si 0.809 3.191 9 C 0.090 3.910 10 O -0.316 6.316 11 C 0.036 3.964 12 C 0.516 3.484 13 O -0.569 6.569 14 N -0.692 5.692 15 C 0.114 3.886 16 H 0.085 0.915 17 C -0.123 4.123 18 C -0.063 4.063 19 H 0.122 0.878 20 C -0.070 4.070 21 C -0.061 4.061 22 C -0.143 4.143 23 Br -0.042 7.042 24 C 0.095 3.905 25 F -0.140 7.140 26 C -0.145 4.145 27 C -0.070 4.070 28 C -0.144 4.144 29 C -0.159 4.159 30 C -0.162 4.162 31 H 0.114 0.886 32 H 0.066 0.934 33 H 0.068 0.932 34 H 0.151 0.849 35 H 0.062 0.938 36 H 0.372 0.628 37 H -0.294 1.294 38 H -0.265 1.265 39 H 0.123 0.877 40 H 0.127 0.873 41 H 0.421 0.579 42 H 0.104 0.896 43 H 0.093 0.907 44 H 0.159 0.841 45 H 0.158 0.842 46 H 0.163 0.837 47 H 0.070 0.930 48 H 0.100 0.900 49 H 0.169 0.831 50 H 0.161 0.839 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -8.517 -1.500 -2.007 8.878 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.077 4.077 2 O -0.248 6.248 3 C 0.045 3.955 4 C -0.137 4.137 5 C -0.120 4.120 6 C -0.187 4.187 7 O -0.351 6.351 8 Si 0.710 3.290 9 C 0.045 3.955 10 O -0.230 6.230 11 C -0.042 4.042 12 C 0.303 3.697 13 O -0.447 6.447 14 N -0.346 5.346 15 C 0.009 3.991 16 H 0.103 0.897 17 C -0.161 4.161 18 C -0.081 4.081 19 H 0.140 0.860 20 C -0.071 4.071 21 C -0.080 4.080 22 C -0.223 4.223 23 Br 0.043 6.957 24 C 0.073 3.927 25 F -0.119 7.119 26 C -0.165 4.165 27 C -0.088 4.088 28 C -0.183 4.183 29 C -0.177 4.177 30 C -0.180 4.180 31 H 0.132 0.868 32 H 0.085 0.915 33 H 0.086 0.914 34 H 0.168 0.832 35 H 0.080 0.920 36 H 0.221 0.779 37 H -0.222 1.222 38 H -0.191 1.191 39 H 0.140 0.860 40 H 0.145 0.855 41 H 0.260 0.740 42 H 0.122 0.878 43 H 0.112 0.888 44 H 0.176 0.824 45 H 0.176 0.824 46 H 0.180 0.820 47 H 0.089 0.911 48 H 0.119 0.881 49 H 0.186 0.814 50 H 0.179 0.821 Dipole moment (debyes) X Y Z Total from point charges -7.211 -2.329 -1.227 7.676 hybrid contribution -0.557 2.416 0.555 2.541 sum -7.768 0.087 -0.673 7.798 Atomic orbital electron populations 1.23354 0.76387 1.05603 1.02370 1.86087 1.23390 1.26366 1.88940 1.18985 0.91941 0.85374 0.99217 1.20182 0.92439 0.96802 1.04292 1.19450 0.95996 0.91023 1.05526 1.25480 0.92852 1.12380 0.88022 1.86662 1.74238 1.42249 1.31960 0.92227 0.76268 0.79152 0.81337 1.18779 0.91712 0.84239 1.00734 1.86082 1.35547 1.11922 1.89442 1.22733 0.92660 0.81879 1.06879 1.20500 0.88286 0.85432 0.75529 1.90778 1.16743 1.87311 1.49904 1.45336 1.11155 1.03628 1.74511 1.21859 0.95624 0.83884 0.97749 0.89696 1.23409 1.00963 0.95891 0.95864 1.21648 1.00285 0.89311 0.96862 0.86036 1.19940 0.92020 0.96579 0.98576 1.21163 1.00374 0.90658 0.95817 1.22129 0.91282 0.97518 1.11402 1.96800 1.27699 1.78885 1.92268 1.17785 0.94494 0.78482 1.01894 1.91528 1.97243 1.32927 1.90197 1.21422 0.96940 0.96387 1.01713 1.21348 0.99521 0.92350 0.95598 1.23603 0.98741 0.98564 0.97355 1.21376 0.92036 1.00014 1.04286 1.21426 1.01592 0.90948 1.04050 0.86786 0.91541 0.91385 0.83158 0.92007 0.77947 1.22196 1.19050 0.85963 0.85517 0.74031 0.87780 0.88806 0.82387 0.82412 0.81954 0.91115 0.88140 0.81411 0.82135 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.11 9.81 113.37 1.11 1.00 16 2 O -0.33 -0.51 10.50 -93.39 -0.98 -1.49 16 3 C 0.09 0.17 6.69 22.49 0.15 0.32 16 4 C -0.12 -0.44 8.59 22.35 0.19 -0.25 16 5 C -0.12 -0.61 5.27 -19.78 -0.10 -0.71 16 6 C -0.08 -0.59 2.33 71.24 0.17 -0.42 16 7 O -0.54 -4.92 12.65 -148.98 -1.89 -6.80 16 8 Si 0.81 3.95 30.17 68.60 2.07 6.02 16 9 C 0.09 0.19 6.62 22.49 0.15 0.34 16 10 O -0.32 -0.90 8.56 -74.27 -0.64 -1.53 16 11 C 0.04 -0.23 5.22 71.24 0.37 0.14 16 12 C 0.52 -0.58 7.91 87.66 0.69 0.11 16 13 O -0.57 -6.14 16.10 16.01 0.26 -5.88 16 14 N -0.69 6.00 5.26 -440.04 -2.32 3.68 16 15 C 0.11 -0.80 4.32 45.52 0.20 -0.60 16 16 H 0.08 -0.11 7.46 -2.39 -0.02 -0.13 16 17 C -0.12 1.39 7.29 31.12 0.23 1.62 16 18 C -0.06 0.70 3.85 -11.01 -0.04 0.65 16 19 H 0.12 -1.75 8.09 -2.39 -0.02 -1.77 16 20 C -0.07 0.48 5.29 -19.86 -0.11 0.38 16 21 C -0.06 0.25 9.45 22.28 0.21 0.46 16 22 C -0.14 -0.19 6.23 22.35 0.14 -0.05 16 23 Br -0.04 -0.13 33.28 -20.37 -0.68 -0.81 16 24 C 0.09 0.25 7.27 22.39 0.16 0.42 16 25 F -0.14 -0.95 16.73 44.97 0.75 -0.20 16 26 C -0.15 0.36 10.03 22.31 0.22 0.58 16 27 C -0.07 0.45 8.62 22.26 0.19 0.64 16 28 C -0.14 1.17 7.25 31.12 0.23 1.40 16 29 C -0.16 0.59 9.03 22.35 0.20 0.79 16 30 C -0.16 0.47 9.03 22.36 0.20 0.67 16 31 H 0.11 -1.02 8.14 -2.39 -0.02 -1.04 16 32 H 0.07 -0.58 7.66 -2.38 -0.02 -0.59 16 33 H 0.07 -0.60 7.66 -2.39 -0.02 -0.62 16 34 H 0.15 0.17 5.13 -2.91 -0.01 0.15 16 35 H 0.06 0.60 7.82 -2.39 -0.02 0.59 16 36 H 0.37 2.35 8.60 -74.06 -0.64 1.71 16 37 H -0.29 -3.31 7.11 99.48 0.71 -2.60 16 38 H -0.26 -1.83 7.11 99.48 0.71 -1.12 16 39 H 0.12 -1.51 7.65 -2.38 -0.02 -1.53 16 40 H 0.13 -1.65 7.67 -2.39 -0.02 -1.67 16 41 H 0.42 -6.84 8.70 -92.71 -0.81 -7.65 16 42 H 0.10 -1.16 7.73 -2.38 -0.02 -1.18 16 43 H 0.09 -1.23 8.14 -2.39 -0.02 -1.25 16 44 H 0.16 -1.26 8.05 -2.91 -0.02 -1.28 16 45 H 0.16 -0.88 8.06 -2.91 -0.02 -0.90 16 46 H 0.16 -1.77 6.64 -2.91 -0.02 -1.79 16 47 H 0.07 -0.43 8.14 -2.39 -0.02 -0.45 16 48 H 0.10 -0.86 6.30 -2.39 -0.02 -0.88 16 49 H 0.17 -1.96 6.29 -2.91 -0.02 -1.98 16 50 H 0.16 -1.39 6.29 -2.91 -0.02 -1.41 16 Total: 0.00 -27.70 437.83 0.78 -26.92 By element: Atomic # 1 Polarization: -27.03 SS G_CDS: -0.37 Total: -27.40 kcal Atomic # 6 Polarization: 2.92 SS G_CDS: 4.56 Total: 7.49 kcal Atomic # 7 Polarization: 6.00 SS G_CDS: -2.32 Total: 3.68 kcal Atomic # 8 Polarization: -12.46 SS G_CDS: -3.24 Total: -15.70 kcal Atomic # 9 Polarization: -0.95 SS G_CDS: 0.75 Total: -0.20 kcal Atomic # 14 Polarization: 3.95 SS G_CDS: 2.07 Total: 6.02 kcal Atomic # 35 Polarization: -0.13 SS G_CDS: -0.68 Total: -0.81 kcal Total: -27.70 0.78 -26.92 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9650940_4974302.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -62.672 kcal (2) G-P(sol) polarization free energy of solvation -27.702 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -90.373 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.781 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -26.921 kcal (6) G-S(sol) free energy of system = (1) + (5) -89.593 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.89 seconds