Wall clock time and date at job start Tue Mar 9 2021 12:58:05 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42901 * 1 3 3 Si 1.86302 * 109.46940 * 2 1 4 4 C 1.50704 * 109.46867 * 119.99541 * 2 1 3 5 5 C 1.38243 * 119.93758 * 65.00273 * 4 2 1 6 6 C 1.38238 * 120.04169 * 180.02562 * 5 4 2 7 7 Br 1.89098 * 120.03596 * 179.97438 * 6 5 4 8 8 C 1.38800 * 119.92979 * 359.97438 * 6 5 4 9 9 O 1.35912 * 120.05934 * 180.02562 * 8 6 5 10 10 C 1.42899 * 117.00075 * 180.02562 * 9 8 6 11 11 C 1.50695 * 109.47400 * 180.02562 * 10 9 8 12 12 O 1.21282 * 119.99917 * 359.97438 * 11 10 9 13 13 N 1.34772 * 120.00305 * 180.02562 * 11 10 9 14 14 C 1.46506 * 120.00033 * 179.97438 * 13 11 10 15 15 H 1.08992 * 112.90684 * 336.24748 * 14 13 11 16 16 C 1.54049 * 113.61276 * 107.61836 * 14 13 11 17 17 C 1.53781 * 87.08031 * 89.07129 * 16 14 13 18 18 H 1.09003 * 113.69043 * 270.86777 * 17 16 14 19 19 C 1.50698 * 113.61565 * 139.97986 * 17 16 14 20 20 C 1.38215 * 119.97230 * 142.50631 * 19 17 16 21 21 C 1.38234 * 120.04330 * 179.97438 * 20 19 17 22 22 C 1.38412 * 119.98589 * 359.97438 * 21 20 19 23 23 F 1.35101 * 120.02706 * 180.02562 * 22 21 20 24 24 C 1.38567 * 119.93740 * 359.97438 * 22 21 20 25 25 Br 1.89099 * 120.01737 * 179.97438 * 24 22 21 26 26 C 1.38250 * 119.95694 * 359.77314 * 24 22 21 27 27 C 1.53781 * 87.08070 * 25.42738 * 17 16 14 28 28 C 1.38714 * 119.88048 * 0.27590 * 8 6 5 29 29 C 1.38153 * 119.95277 * 359.47646 * 28 8 6 30 30 H 0.96704 * 114.00044 * 60.00514 * 1 2 3 31 31 H 1.08995 * 109.47145 * 239.99866 * 2 1 3 32 32 H 1.48502 * 109.99597 * 298.67538 * 3 2 1 33 33 H 1.48490 * 110.00310 * 59.99704 * 3 2 1 34 34 H 1.07991 * 119.98344 * 0.02562 * 5 4 2 35 35 H 1.08997 * 109.47308 * 59.99601 * 10 9 8 36 36 H 1.09001 * 109.46756 * 299.99737 * 10 9 8 37 37 H 0.97002 * 120.00078 * 359.97438 * 13 11 10 38 38 H 1.09005 * 113.62125 * 334.52173 * 16 14 13 39 39 H 1.09003 * 113.61268 * 203.61961 * 16 14 13 40 40 H 1.07996 * 119.97863 * 359.97130 * 20 19 17 41 41 H 1.08002 * 120.00649 * 179.97438 * 21 20 19 42 42 H 1.08006 * 119.99239 * 180.25628 * 26 24 22 43 43 H 1.09002 * 113.61445 * 89.11830 * 27 17 16 44 44 H 1.09002 * 113.61408 * 219.93560 * 27 17 16 45 45 H 1.08000 * 120.02497 * 179.72054 * 28 8 6 46 46 H 1.08002 * 119.96436 * 180.25202 * 29 28 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9313 -0.7103 1.2306 5 6 1.6840 -2.0602 1.3972 6 6 2.1432 -2.7138 2.5254 7 35 1.8042 -4.5601 2.7536 8 6 2.8535 -2.0135 3.4906 9 8 3.3067 -2.6536 4.6006 10 6 4.0297 -1.8697 5.5518 11 6 4.4499 -2.7423 6.7063 12 8 4.1585 -3.9196 6.7140 13 7 5.1486 -2.2144 7.7307 14 6 5.5566 -3.0627 8.8534 15 1 4.9267 -3.9446 8.9695 16 6 7.0655 -3.3722 8.8764 17 6 7.2353 -2.0920 9.7113 18 1 7.3902 -1.1951 9.1114 19 6 8.2370 -2.2286 10.8289 20 6 9.0646 -1.1685 11.1478 21 6 9.9836 -1.2920 12.1730 22 6 10.0748 -2.4778 12.8811 23 9 10.9724 -2.5992 13.8835 24 6 9.2441 -3.5397 12.5615 25 35 9.3673 -5.1610 13.5269 26 6 8.3223 -3.4117 11.5391 27 6 5.7782 -2.2871 10.1627 28 6 3.0955 -0.6579 3.3227 29 6 2.6386 -0.0107 2.1909 30 1 -0.3933 0.4416 -0.7651 31 1 1.7923 -0.5138 -0.8899 32 1 1.5879 2.4585 -1.2243 33 1 1.5614 2.4679 1.2083 34 1 1.1316 -2.6045 0.6457 35 1 3.3931 -1.0641 5.9177 36 1 4.9143 -1.4462 5.0762 37 1 5.3813 -1.2727 7.7248 38 1 7.5372 -3.3193 7.8951 39 1 7.3160 -4.2838 9.4190 40 1 8.9932 -0.2431 10.5956 41 1 10.6303 -0.4634 12.4214 42 1 7.6716 -4.2377 11.2923 43 1 5.6768 -2.9020 11.0570 44 1 5.2111 -1.3581 10.2213 45 1 3.6440 -0.1097 4.0744 46 1 2.8305 1.0438 2.0581 There are 71 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 71 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_9650940_6201210.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:58:05 Heat of formation + Delta-G solvation = -46.738044 kcal Electronic energy + Delta-G solvation = -33696.581649 eV Core-core repulsion = 28561.685769 eV Total energy + Delta-G solvation = -5134.895880 eV No. of doubly occupied orbitals = 71 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 513.962 amu Computer time = 0.71 seconds Orbital eigenvalues (eV) -50.01779 -41.93559 -41.48351 -40.43298 -39.31859 -38.63027 -37.42683 -34.77987 -33.64282 -33.58085 -32.14469 -31.81764 -30.53420 -30.39758 -29.62238 -26.96181 -26.56083 -26.10117 -24.36398 -23.97782 -22.81494 -22.36556 -21.91185 -20.47152 -19.63785 -18.96685 -18.66766 -18.46618 -17.82370 -17.61118 -17.51521 -17.02692 -16.90050 -16.80331 -16.70502 -15.88491 -15.80651 -15.70501 -15.62786 -15.44146 -14.93647 -14.80874 -14.63354 -14.49071 -14.25108 -14.17141 -14.08467 -14.02569 -13.93758 -13.65755 -13.58325 -13.35309 -12.69169 -12.56997 -12.38999 -12.22744 -12.18196 -12.14195 -11.84754 -11.76583 -11.72532 -11.52398 -11.34569 -11.02823 -10.98464 -10.58620 -10.29415 -10.10766 -9.94936 -9.67952 -9.31517 -5.08507 -0.27015 -0.12045 -0.06794 0.08835 0.43209 0.73608 1.17440 1.26029 1.38580 1.48302 1.84196 2.16843 2.31679 2.35759 2.95893 3.16541 3.20005 3.30594 3.34756 3.43338 3.47177 3.53283 3.62047 3.66224 3.71496 3.79248 3.82400 3.82647 3.86246 4.02633 4.03008 4.18864 4.27000 4.39463 4.42602 4.49674 4.57316 4.61251 4.65901 4.69625 4.70766 4.77779 4.79699 4.85495 4.92023 4.92331 5.18507 5.21307 5.35382 5.41669 5.50775 5.96198 6.22791 6.34984 7.00011 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.535 6.535 2 C -0.072 4.072 3 Si 0.683 3.317 4 C -0.104 4.104 5 C -0.023 4.023 6 C -0.122 4.122 7 Br -0.025 7.025 8 C 0.160 3.840 9 O -0.274 6.274 10 C 0.037 3.963 11 C 0.519 3.481 12 O -0.502 6.502 13 N -0.711 5.711 14 C 0.122 3.878 15 H 0.110 0.890 16 C -0.145 4.145 17 C -0.073 4.073 18 H 0.104 0.896 19 C -0.077 4.077 20 C -0.071 4.071 21 C -0.144 4.144 22 C 0.123 3.877 23 F -0.123 7.123 24 C -0.128 4.128 25 Br -0.025 7.025 26 C -0.061 4.061 27 C -0.136 4.136 28 C -0.200 4.200 29 C -0.059 4.059 30 H 0.381 0.619 31 H 0.079 0.921 32 H -0.259 1.259 33 H -0.254 1.254 34 H 0.143 0.857 35 H 0.098 0.902 36 H 0.099 0.901 37 H 0.403 0.597 38 H 0.079 0.921 39 H 0.097 0.903 40 H 0.140 0.860 41 H 0.146 0.854 42 H 0.144 0.856 43 H 0.101 0.899 44 H 0.081 0.919 45 H 0.142 0.858 46 H 0.137 0.863 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.728 8.144 -2.688 8.999 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.343 6.343 2 C -0.182 4.182 3 Si 0.584 3.416 4 C -0.106 4.106 5 C -0.043 4.043 6 C -0.203 4.203 7 Br 0.061 6.939 8 C 0.112 3.888 9 O -0.185 6.185 10 C -0.042 4.042 11 C 0.303 3.697 12 O -0.375 6.375 13 N -0.365 5.365 14 C 0.017 3.983 15 H 0.128 0.872 16 C -0.184 4.184 17 C -0.091 4.091 18 H 0.122 0.878 19 C -0.078 4.078 20 C -0.089 4.089 21 C -0.164 4.164 22 C 0.102 3.898 23 F -0.102 7.102 24 C -0.209 4.209 25 Br 0.060 6.940 26 C -0.081 4.081 27 C -0.174 4.174 28 C -0.219 4.219 29 C -0.077 4.077 30 H 0.229 0.771 31 H 0.097 0.903 32 H -0.184 1.184 33 H -0.179 1.179 34 H 0.160 0.840 35 H 0.116 0.884 36 H 0.117 0.883 37 H 0.237 0.763 38 H 0.097 0.903 39 H 0.115 0.885 40 H 0.158 0.842 41 H 0.164 0.836 42 H 0.161 0.839 43 H 0.119 0.881 44 H 0.099 0.901 45 H 0.159 0.841 46 H 0.154 0.846 Dipole moment (debyes) X Y Z Total from point charges 2.310 6.250 -1.583 6.848 hybrid contribution -0.583 1.364 -0.486 1.561 sum 1.726 7.614 -2.069 8.077 Atomic orbital electron populations 1.86602 1.17666 1.80161 1.49851 1.24743 0.84604 1.10908 0.97915 0.95153 0.91491 0.74480 0.80489 1.19138 1.01358 0.93481 0.96597 1.20856 0.94959 0.93671 0.94791 1.21120 1.07947 0.93157 0.98039 1.96806 1.94743 1.04785 1.97599 1.18613 0.93143 0.90686 0.86369 1.86283 1.68037 1.36009 1.28171 1.22539 0.98016 0.94104 0.89521 1.19962 0.78262 0.88518 0.82971 1.90821 1.52947 1.16007 1.77708 1.45449 1.57127 1.13187 1.20743 1.21902 0.96119 0.94955 0.85372 0.87230 1.23651 0.96071 0.97614 1.01021 1.21628 0.93032 0.99863 0.94565 0.87782 1.19737 0.97554 0.93209 0.97308 1.21077 0.93396 0.98827 0.95627 1.21205 1.01352 0.96625 0.97181 1.17443 0.89767 0.94236 0.88374 1.91582 1.64826 1.96243 1.57513 1.21990 1.02797 0.93835 1.02264 1.96842 1.98108 1.25978 1.73046 1.20900 0.96173 0.98342 0.92636 1.23461 0.94827 1.01635 0.97447 1.21129 1.07113 0.92782 1.00896 1.20911 0.95106 0.99573 0.92083 0.77069 0.90326 1.18423 1.17888 0.83957 0.88438 0.88335 0.76271 0.90251 0.88457 0.84223 0.83616 0.83857 0.88100 0.90078 0.84072 0.84574 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 -0.19 12.81 -35.23 -0.45 -0.64 16 2 C -0.07 0.08 2.79 36.01 0.10 0.18 16 3 Si 0.68 -1.53 29.85 -169.99 -5.07 -6.61 16 4 C -0.10 -0.03 5.38 -104.60 -0.56 -0.59 16 5 C -0.02 -0.03 9.42 -39.58 -0.37 -0.41 16 6 C -0.12 -0.31 6.24 -39.37 -0.25 -0.56 16 7 Br -0.02 -0.09 33.16 -68.01 -2.26 -2.35 16 8 C 0.16 0.22 6.68 -39.20 -0.26 -0.04 16 9 O -0.27 -0.55 9.00 -39.37 -0.35 -0.91 16 10 C 0.04 -0.09 5.22 36.00 0.19 0.10 16 11 C 0.52 -0.05 7.91 -10.99 -0.09 -0.14 16 12 O -0.50 -2.61 16.10 -14.35 -0.23 -2.84 16 13 N -0.71 2.50 5.26 -52.88 -0.28 2.22 16 14 C 0.12 -0.34 4.34 -66.97 -0.29 -0.63 16 15 H 0.11 -0.06 7.47 -51.93 -0.39 -0.45 16 16 C -0.15 0.47 7.26 -25.78 -0.19 0.28 16 17 C -0.07 0.32 3.86 -90.96 -0.35 -0.03 16 18 H 0.10 -0.63 8.09 -51.93 -0.42 -1.05 16 19 C -0.08 0.20 5.29 -104.62 -0.55 -0.35 16 20 C -0.07 0.20 9.70 -39.59 -0.38 -0.18 16 21 C -0.14 0.19 10.03 -39.52 -0.40 -0.21 16 22 C 0.12 0.12 7.27 -39.40 -0.29 -0.16 16 23 F -0.12 -0.33 16.73 2.25 0.04 -0.29 16 24 C -0.13 -0.09 6.23 -39.46 -0.25 -0.34 16 25 Br -0.03 -0.04 33.29 -68.01 -2.26 -2.30 16 26 C -0.06 0.08 8.33 -39.57 -0.33 -0.25 16 27 C -0.14 0.59 7.28 -25.92 -0.19 0.40 16 28 C -0.20 0.26 9.04 -39.44 -0.36 -0.10 16 29 C -0.06 0.06 8.66 -39.60 -0.34 -0.28 16 30 H 0.38 -1.36 8.74 45.56 0.40 -0.96 16 31 H 0.08 -0.22 7.96 -51.93 -0.41 -0.63 16 32 H -0.26 0.00 7.11 56.52 0.40 0.40 16 33 H -0.25 -0.14 7.05 56.52 0.40 0.25 16 34 H 0.14 0.11 8.06 -52.49 -0.42 -0.31 16 35 H 0.10 -0.48 7.65 -51.93 -0.40 -0.88 16 36 H 0.10 -0.53 7.67 -51.93 -0.40 -0.93 16 37 H 0.40 -2.76 8.70 -40.82 -0.36 -3.11 16 38 H 0.08 -0.20 8.14 -51.93 -0.42 -0.62 16 39 H 0.10 -0.30 6.32 -51.93 -0.33 -0.62 16 40 H 0.14 -0.74 8.05 -52.49 -0.42 -1.17 16 41 H 0.15 -0.43 8.06 -52.49 -0.42 -0.85 16 42 H 0.14 -0.36 6.68 -52.48 -0.35 -0.71 16 43 H 0.10 -0.40 7.71 -51.93 -0.40 -0.81 16 44 H 0.08 -0.41 8.14 -51.93 -0.42 -0.83 16 45 H 0.14 -0.67 6.30 -52.49 -0.33 -1.00 16 46 H 0.14 -0.45 4.86 -52.49 -0.26 -0.70 16 LS Contribution 429.89 15.07 6.48 6.48 Total: 0.00 -11.00 429.89 -14.50 -25.50 By element: Atomic # 1 Polarization: -10.03 SS G_CDS: -4.95 Total: -14.98 kcal Atomic # 6 Polarization: 1.87 SS G_CDS: -5.15 Total: -3.29 kcal Atomic # 7 Polarization: 2.50 SS G_CDS: -0.28 Total: 2.22 kcal Atomic # 8 Polarization: -3.36 SS G_CDS: -1.04 Total: -4.39 kcal Atomic # 9 Polarization: -0.33 SS G_CDS: 0.04 Total: -0.29 kcal Atomic # 14 Polarization: -1.53 SS G_CDS: -5.07 Total: -6.61 kcal Atomic # 35 Polarization: -0.13 SS G_CDS: -4.52 Total: -4.65 kcal Total LS contribution 6.48 Total: 6.48 kcal Total: -11.00 -14.50 -25.50 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9650940_6201210.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -21.235 kcal (2) G-P(sol) polarization free energy of solvation -11.004 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -32.239 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -14.499 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -25.503 kcal (6) G-S(sol) free energy of system = (1) + (5) -46.738 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.71 seconds