Wall clock time and date at job start Tue Mar 9 2021 12:58:21 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50703 * 1 3 3 C 1.33818 * 122.45115 * 2 1 4 4 C 1.50691 * 124.52212 * 0.02562 * 3 2 1 5 5 O 1.42900 * 109.47513 * 46.34497 * 4 3 2 6 6 Si 1.86301 * 109.47227 * 166.34948 * 4 3 2 7 7 S 1.70616 * 110.95426 * 179.97438 * 3 2 1 8 8 C 1.75837 * 91.56470 * 0.02562 * 7 3 2 9 9 C 1.46582 * 125.45797 * 180.02562 * 8 7 3 10 10 O 1.21706 * 119.99785 * 180.02562 * 9 8 7 11 11 N 1.34779 * 119.99895 * 0.02562 * 9 8 7 12 12 C 1.46497 * 119.99503 * 180.02562 * 11 9 8 13 13 H 1.08996 * 112.85332 * 336.19698 * 12 11 9 14 14 C 1.53952 * 113.53641 * 107.50973 * 12 11 9 15 15 C 1.53780 * 87.02358 * 89.18343 * 14 12 11 16 16 H 1.08990 * 113.61721 * 270.77198 * 15 14 12 17 17 C 1.50704 * 113.61368 * 139.94966 * 15 14 12 18 18 C 1.38213 * 119.96512 * 140.86850 * 17 15 14 19 19 C 1.38302 * 120.01037 * 179.69822 * 18 17 15 20 20 Br 1.89104 * 120.02225 * 180.25087 * 19 18 17 21 21 C 1.38524 * 119.95770 * 0.27731 * 19 18 17 22 22 F 1.35102 * 120.02754 * 180.02562 * 21 19 18 23 23 C 1.38454 * 119.94321 * 359.97438 * 21 19 18 24 24 C 1.38190 * 119.97922 * 359.97438 * 23 21 19 25 25 C 1.53785 * 87.17266 * 25.36224 * 15 14 12 26 26 C 1.36648 * 109.08124 * 0.26313 * 8 7 3 27 27 H 1.08997 * 109.46935 * 84.18031 * 1 2 3 28 28 H 1.08994 * 109.47200 * 204.17969 * 1 2 3 29 29 H 1.09000 * 109.46562 * 324.18200 * 1 2 3 30 30 H 1.09007 * 109.47294 * 286.34692 * 4 3 2 31 31 H 0.96698 * 114.00015 * 59.99878 * 5 4 3 32 32 H 1.48491 * 110.00063 * 58.67883 * 6 4 3 33 33 H 1.48502 * 109.99824 * 179.97438 * 6 4 3 34 34 H 0.96994 * 120.00371 * 0.02562 * 11 9 8 35 35 H 1.08996 * 113.67101 * 334.65588 * 14 12 11 36 36 H 1.09003 * 113.61520 * 203.70663 * 14 12 11 37 37 H 1.08000 * 119.99940 * 359.97438 * 18 17 15 38 38 H 1.07999 * 120.01042 * 180.02562 * 23 21 19 39 39 H 1.08006 * 119.97541 * 180.02562 * 24 23 21 40 40 H 1.09002 * 113.61243 * 89.15258 * 25 15 14 41 41 H 1.08994 * 113.61773 * 219.98245 * 25 15 14 42 42 H 1.07996 * 123.35079 * 179.74284 * 26 8 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.2251 1.1292 0.0000 4 6 1.6356 2.5161 0.0006 5 8 0.5937 2.5905 0.9757 6 14 2.9637 3.7552 0.4149 7 16 3.8970 0.7892 0.0007 8 6 3.5937 -0.9429 0.0002 9 6 4.6231 -1.9864 0.0010 10 8 4.3001 -3.1598 0.0001 11 7 5.9273 -1.6464 0.0028 12 6 6.9561 -2.6894 0.0030 13 1 6.5986 -3.6364 0.4072 14 6 7.6916 -2.8277 -1.3423 15 6 8.6833 -1.7764 -0.8168 16 1 8.3914 -0.7505 -1.0406 17 6 10.1180 -2.0680 -1.1746 18 6 10.9630 -1.0354 -1.5352 19 6 12.2814 -1.3012 -1.8577 20 35 13.4398 0.1122 -2.3443 21 6 12.7528 -2.6033 -1.8244 22 9 14.0405 -2.8644 -2.1386 23 6 11.9033 -3.6369 -1.4679 24 6 10.5867 -3.3684 -1.1452 25 6 8.2972 -2.2316 0.6005 26 6 2.2446 -1.1601 -0.0064 27 1 -0.3633 0.1042 -1.0223 28 1 -0.3633 -0.9374 0.4209 29 1 -0.3632 0.8333 0.6014 30 1 1.2269 2.7376 -0.9854 31 1 0.8859 2.4043 1.8785 32 1 4.0680 3.6658 -0.5738 33 1 2.3952 5.1270 0.4180 34 1 6.1848 -0.7113 0.0039 35 1 7.1074 -2.4878 -2.1974 36 1 8.1379 -3.8101 -1.4970 37 1 10.5950 -0.0204 -1.5610 38 1 12.2697 -4.6524 -1.4412 39 1 9.9242 -4.1747 -0.8667 40 1 8.9093 -3.0508 0.9779 41 1 8.2024 -1.4113 1.3119 42 1 1.8019 -2.1452 -0.0120 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_9650940_6739946.mol2 42 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:58:21 Heat of formation + Delta-G solvation = -16.527406 kcal Electronic energy + Delta-G solvation = -28605.103809 eV Core-core repulsion = 24219.170402 eV Total energy + Delta-G solvation = -4385.933407 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 426.009 amu Computer time = 0.61 seconds Orbital eigenvalues (eV) -50.08194 -41.67860 -40.59919 -39.79672 -38.73761 -37.32137 -34.75423 -33.42906 -32.34690 -31.65335 -30.25192 -30.12717 -27.10768 -26.68781 -25.72393 -24.46447 -24.08506 -22.67376 -21.98009 -20.42363 -19.96847 -19.47802 -18.86006 -17.69859 -17.69544 -17.41338 -17.01994 -16.85677 -16.63222 -16.48375 -16.07365 -15.95162 -15.52712 -15.38580 -14.91798 -14.72443 -14.67243 -14.46260 -14.35294 -14.18746 -13.94198 -13.78968 -13.48054 -13.46336 -13.28521 -13.12303 -12.88933 -12.47440 -12.39058 -12.24569 -12.12604 -12.02017 -11.74933 -11.58868 -11.47123 -11.26536 -11.22396 -10.57703 -10.25086 -10.03002 -9.75712 -9.59859 -9.42569 -5.09758 -0.67870 -0.19294 0.01489 0.26359 0.43557 0.66820 1.14255 1.27305 1.55723 1.90530 1.94795 2.04741 2.30018 3.02955 3.38356 3.41306 3.48808 3.59524 3.66361 3.69392 3.74203 3.92675 4.03488 4.08795 4.11351 4.15742 4.30963 4.42543 4.50820 4.58163 4.62266 4.76076 4.78438 4.80839 4.84197 4.85387 4.89235 4.92390 5.01745 5.03295 5.08201 5.13600 5.34042 5.39783 5.47124 5.57292 5.64544 6.32433 6.67245 7.01097 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.107 4.107 2 C -0.096 4.096 3 C -0.238 4.238 4 C -0.030 4.030 5 O -0.540 6.540 6 Si 0.723 3.277 7 S 0.248 5.752 8 C -0.282 4.282 9 C 0.593 3.407 10 O -0.568 6.568 11 N -0.697 5.697 12 C 0.112 3.888 13 H 0.094 0.906 14 C -0.143 4.143 15 C -0.067 4.067 16 H 0.115 0.885 17 C -0.069 4.069 18 C -0.062 4.062 19 C -0.143 4.143 20 Br -0.043 7.043 21 C 0.095 3.905 22 F -0.140 7.140 23 C -0.144 4.144 24 C -0.068 4.068 25 C -0.124 4.124 26 C -0.059 4.059 27 H 0.065 0.935 28 H 0.067 0.933 29 H 0.097 0.903 30 H 0.120 0.880 31 H 0.397 0.603 32 H -0.251 1.251 33 H -0.271 1.271 34 H 0.411 0.589 35 H 0.068 0.932 36 H 0.107 0.893 37 H 0.156 0.844 38 H 0.160 0.840 39 H 0.166 0.834 40 H 0.111 0.889 41 H 0.091 0.909 42 H 0.145 0.855 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.168 2.567 3.842 4.766 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.165 4.165 2 C -0.109 4.109 3 C -0.358 4.358 4 C -0.143 4.143 5 O -0.348 6.348 6 Si 0.625 3.375 7 S 0.517 5.483 8 C -0.402 4.402 9 C 0.381 3.619 10 O -0.449 6.449 11 N -0.348 5.348 12 C 0.007 3.993 13 H 0.112 0.888 14 C -0.181 4.181 15 C -0.085 4.085 16 H 0.133 0.867 17 C -0.070 4.070 18 C -0.082 4.082 19 C -0.223 4.223 20 Br 0.043 6.957 21 C 0.074 3.926 22 F -0.119 7.119 23 C -0.163 4.163 24 C -0.086 4.086 25 C -0.161 4.161 26 C -0.093 4.093 27 H 0.083 0.917 28 H 0.086 0.914 29 H 0.115 0.885 30 H 0.137 0.863 31 H 0.248 0.752 32 H -0.176 1.176 33 H -0.197 1.197 34 H 0.248 0.752 35 H 0.087 0.913 36 H 0.125 0.875 37 H 0.173 0.827 38 H 0.178 0.822 39 H 0.183 0.817 40 H 0.130 0.870 41 H 0.110 0.890 42 H 0.163 0.837 Dipole moment (debyes) X Y Z Total from point charges 0.567 4.024 2.868 4.975 hybrid contribution -1.387 -1.234 -0.727 1.994 sum -0.820 2.791 2.141 3.612 Atomic orbital electron populations 1.20753 0.88476 1.04279 1.02987 1.18770 0.98756 0.90528 1.02854 1.24608 0.98842 1.01113 1.11219 1.24588 0.98398 0.95161 0.96105 1.86454 1.35043 1.92619 1.20698 0.94145 0.76704 0.77675 0.89009 1.82634 1.02411 0.95836 1.67431 1.24600 0.97674 0.98500 1.19385 1.17134 0.82459 0.87011 0.75332 1.90837 1.82298 1.19983 1.51773 1.45446 1.04279 1.10644 1.74443 1.21999 0.87382 0.91893 0.98030 0.88753 1.23643 0.96874 1.00458 0.97147 1.21647 0.88812 1.00927 0.97112 0.86711 1.19907 0.95975 0.92575 0.98569 1.21153 0.89615 1.01464 0.95959 1.22116 0.97170 0.91701 1.11329 1.96797 1.63361 1.44113 1.91458 1.17781 0.79645 0.93270 1.01889 1.91531 1.35318 1.94630 1.90393 1.21428 0.94117 0.99265 1.01499 1.21351 0.94219 0.97483 0.95556 1.23437 0.93867 1.03081 0.95745 1.20811 0.91412 1.00247 0.96795 0.91673 0.91401 0.88484 0.86256 0.75227 1.17622 1.19679 0.75237 0.91333 0.87471 0.82655 0.82212 0.81671 0.87048 0.89010 0.83711 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.11 0.12 9.74 71.24 0.69 0.81 16 2 C -0.10 -0.01 5.75 -21.05 -0.12 -0.13 16 3 C -0.24 0.64 5.62 24.68 0.14 0.77 16 4 C -0.03 0.13 2.68 71.23 0.19 0.32 16 5 O -0.54 2.38 10.27 -148.98 -1.53 0.85 16 6 Si 0.72 -4.33 30.96 68.60 2.12 -2.21 16 7 S 0.25 -1.15 19.33 -56.49 -1.09 -2.25 16 8 C -0.28 -0.41 6.45 24.08 0.16 -0.25 16 9 C 0.59 2.35 7.78 86.42 0.67 3.03 16 10 O -0.57 -7.02 16.44 -4.37 -0.07 -7.09 16 11 N -0.70 2.32 5.26 -443.80 -2.33 -0.02 16 12 C 0.11 -0.54 4.33 45.58 0.20 -0.35 16 13 H 0.09 -0.08 7.46 -2.39 -0.02 -0.10 16 14 C -0.14 0.94 7.27 31.18 0.23 1.17 16 15 C -0.07 0.60 3.85 -11.01 -0.04 0.56 16 16 H 0.11 -1.29 8.08 -2.39 -0.02 -1.31 16 17 C -0.07 0.40 5.29 -19.86 -0.11 0.30 16 18 C -0.06 0.18 9.45 22.28 0.21 0.39 16 19 C -0.14 -0.29 6.23 22.35 0.14 -0.15 16 20 Br -0.04 -0.16 33.28 -20.37 -0.68 -0.84 16 21 C 0.10 0.28 7.27 22.39 0.16 0.44 16 22 F -0.14 -0.97 16.73 44.97 0.75 -0.22 16 23 C -0.14 0.36 10.03 22.31 0.22 0.58 16 24 C -0.07 0.42 8.54 22.26 0.19 0.61 16 25 C -0.12 1.20 7.29 31.13 0.23 1.42 16 26 C -0.06 -0.16 9.78 21.72 0.21 0.05 16 27 H 0.06 -0.04 8.14 -2.39 -0.02 -0.06 16 28 H 0.07 -0.12 8.10 -2.39 -0.02 -0.14 16 29 H 0.10 -0.16 5.55 -2.39 -0.01 -0.18 16 30 H 0.12 -0.41 7.96 -2.38 -0.02 -0.42 16 31 H 0.40 -4.66 8.70 -74.06 -0.64 -5.30 16 32 H -0.25 0.80 7.11 99.48 0.71 1.51 16 33 H -0.27 -0.27 7.11 99.48 0.71 0.44 16 34 H 0.41 -3.47 7.81 -92.71 -0.72 -4.19 16 35 H 0.07 -0.27 8.14 -2.39 -0.02 -0.29 16 36 H 0.11 -0.89 6.38 -2.39 -0.02 -0.91 16 37 H 0.16 -0.97 8.05 -2.91 -0.02 -1.00 16 38 H 0.16 -0.94 8.06 -2.91 -0.02 -0.96 16 39 H 0.17 -1.85 6.72 -2.91 -0.02 -1.87 16 40 H 0.11 -1.22 7.65 -2.39 -0.02 -1.24 16 41 H 0.09 -1.01 8.14 -2.39 -0.02 -1.03 16 42 H 0.15 0.57 8.06 -2.91 -0.02 0.55 16 Total: 0.00 -19.00 386.85 0.32 -18.68 By element: Atomic # 1 Polarization: -16.27 SS G_CDS: -0.23 Total: -16.49 kcal Atomic # 6 Polarization: 6.21 SS G_CDS: 3.37 Total: 9.58 kcal Atomic # 7 Polarization: 2.32 SS G_CDS: -2.33 Total: -0.02 kcal Atomic # 8 Polarization: -4.64 SS G_CDS: -1.60 Total: -6.24 kcal Atomic # 9 Polarization: -0.97 SS G_CDS: 0.75 Total: -0.22 kcal Atomic # 14 Polarization: -4.33 SS G_CDS: 2.12 Total: -2.21 kcal Atomic # 16 Polarization: -1.15 SS G_CDS: -1.09 Total: -2.25 kcal Atomic # 35 Polarization: -0.16 SS G_CDS: -0.68 Total: -0.84 kcal Total: -19.00 0.32 -18.68 kcal The number of atoms in the molecule is 42 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9650940_6739946.mol2 42 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 2.150 kcal (2) G-P(sol) polarization free energy of solvation -18.997 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -16.847 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.319 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.678 kcal (6) G-S(sol) free energy of system = (1) + (5) -16.527 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.61 seconds