Wall clock time and date at job start Tue Mar 9 2021 12:58:34 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50707 * 1 3 3 C 1.37932 * 120.07398 * 2 1 4 4 C 1.38384 * 120.14652 * 180.28085 * 3 2 1 5 5 C 1.50696 * 119.85581 * 179.72402 * 4 3 2 6 6 C 1.38344 * 120.29056 * 359.74243 * 4 3 2 7 7 C 1.50697 * 119.92520 * 180.02562 * 6 4 3 8 8 O 1.42894 * 109.46980 * 75.02406 * 7 6 4 9 9 Si 1.86301 * 109.46700 * 195.02474 * 7 6 4 10 10 C 1.37980 * 120.14133 * 0.02562 * 6 4 3 11 11 C 1.39555 * 119.85725 * 359.97438 * 10 6 4 12 12 C 1.47841 * 120.14363 * 179.97438 * 11 10 6 13 13 O 1.21552 * 119.99779 * 173.75839 * 12 11 10 14 14 N 1.34773 * 120.00218 * 353.74876 * 12 11 10 15 15 C 1.46503 * 119.99944 * 180.02562 * 14 12 11 16 16 H 1.08991 * 112.90918 * 336.25588 * 15 14 12 17 17 C 1.53784 * 113.61050 * 107.50304 * 15 14 12 18 18 C 1.53787 * 87.08015 * 89.11829 * 17 15 14 19 19 H 1.09004 * 113.68877 * 270.87132 * 18 17 15 20 20 C 1.50695 * 113.61706 * 139.98044 * 18 17 15 21 21 C 1.38216 * 119.96879 * 322.80072 * 20 18 17 22 22 C 1.38301 * 120.01207 * 180.29966 * 21 20 18 23 23 Br 1.89100 * 120.02163 * 179.69658 * 22 21 20 24 24 C 1.38522 * 119.95976 * 359.42431 * 22 21 20 25 25 F 1.35098 * 120.03160 * 180.25451 * 24 22 21 26 26 C 1.38458 * 119.93631 * 0.27706 * 24 22 21 27 27 C 1.38193 * 119.98652 * 0.02562 * 26 24 22 28 28 C 1.53781 * 113.61253 * 204.99977 * 15 14 12 29 29 H 1.09005 * 109.46722 * 263.61996 * 1 2 3 30 30 H 1.09001 * 109.46984 * 23.61854 * 1 2 3 31 31 H 1.08999 * 109.47020 * 143.62179 * 1 2 3 32 32 H 1.08000 * 119.92847 * 0.02562 * 3 2 1 33 33 H 1.09000 * 109.46971 * 270.01911 * 5 4 3 34 34 H 1.09002 * 109.47212 * 30.01918 * 5 4 3 35 35 H 1.09001 * 109.47410 * 150.02131 * 5 4 3 36 36 H 1.08998 * 109.47113 * 315.01695 * 7 6 4 37 37 H 0.96696 * 114.00417 * 299.99311 * 8 7 6 38 38 H 1.48498 * 109.99902 * 298.67745 * 9 7 6 39 39 H 1.48493 * 110.00426 * 60.00043 * 9 7 6 40 40 H 1.08000 * 120.06889 * 179.97438 * 10 6 4 41 41 H 0.96998 * 120.00201 * 0.02562 * 14 12 11 42 42 H 1.09000 * 113.61690 * 334.57073 * 17 15 14 43 43 H 1.08999 * 113.61241 * 203.66254 * 17 15 14 44 44 H 1.07995 * 119.99449 * 0.02562 * 21 20 18 45 45 H 1.08001 * 120.00353 * 180.02562 * 26 24 22 46 46 H 1.08000 * 119.97529 * 180.02562 * 27 26 24 47 47 H 1.08998 * 113.61158 * 156.33895 * 28 15 14 48 48 H 1.08998 * 113.61711 * 25.43837 * 28 15 14 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5071 0.0000 0.0000 3 6 2.1983 1.1936 0.0000 4 6 3.5821 1.1954 -0.0059 5 6 4.3306 2.5033 -0.0121 6 6 4.2814 0.0017 -0.0064 7 6 5.7883 0.0132 -0.0122 8 8 6.2669 0.3674 1.2868 9 14 6.4204 -1.6793 -0.4669 10 6 3.6021 -1.1993 -0.0016 11 6 2.2066 -1.2081 0.0043 12 6 1.4723 -2.4912 0.0089 13 8 0.2627 -2.4988 0.1285 14 7 2.1440 -3.6525 -0.1197 15 6 1.4162 -4.9240 -0.1157 16 1 0.4528 -4.8598 0.3899 17 6 1.3435 -5.5964 -1.4968 18 6 2.6679 -6.2923 -1.1405 19 1 3.5524 -5.7214 -1.4233 20 6 2.7328 -7.7306 -1.5853 21 6 1.6040 -8.5254 -1.5193 22 6 1.6641 -9.8473 -1.9214 23 35 0.1220 -10.9372 -1.8231 24 6 2.8533 -10.3709 -2.4015 25 9 2.9124 -11.6605 -2.7995 26 6 3.9815 -9.5713 -2.4726 27 6 3.9202 -8.2525 -2.0643 28 6 2.2699 -6.1210 0.3350 29 1 -0.3633 -0.1142 1.0214 30 1 -0.3633 0.9416 -0.4117 31 1 -0.3633 -0.8274 -0.6095 32 1 1.6583 2.1290 0.0004 33 1 4.5064 2.8164 -1.0413 34 1 3.7410 3.2619 0.5027 35 1 5.2859 2.3777 0.4976 36 1 6.1433 0.7415 -0.7413 37 1 5.9762 1.2386 1.5891 38 1 5.9698 -2.6763 0.5370 39 1 5.9296 -2.0593 -1.8159 40 1 4.1492 -2.1304 -0.0024 41 1 3.1092 -3.6466 -0.2149 42 1 1.4279 -4.8966 -2.3282 43 1 0.5043 -6.2837 -1.6042 44 1 0.6759 -8.1153 -1.1495 45 1 4.9091 -9.9783 -2.8471 46 1 4.8002 -7.6289 -2.1202 47 1 1.6840 -6.9517 0.7284 48 1 3.1021 -5.8447 0.9825 There are 68 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 68 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_9650940_9599494.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:58:34 Heat of formation + Delta-G solvation = -22.680806 kcal Electronic energy + Delta-G solvation = -32950.807958 eV Core-core repulsion = 28319.917854 eV Total energy + Delta-G solvation = -4630.890104 eV No. of doubly occupied orbitals = 68 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 434.068 amu Computer time = 0.79 seconds Orbital eigenvalues (eV) -50.11538 -42.05214 -41.23621 -40.12146 -38.88431 -37.60998 -35.13943 -34.36181 -33.65691 -33.28985 -31.62901 -30.45988 -29.39529 -28.62439 -26.81522 -26.29602 -25.54253 -24.23256 -23.84329 -23.09278 -22.43023 -21.18044 -20.29103 -19.09021 -18.85627 -18.36587 -17.76811 -17.33422 -17.05172 -16.89088 -16.62453 -16.51000 -16.26416 -16.20965 -15.60791 -15.57808 -15.19091 -14.94979 -14.75113 -14.70015 -14.59760 -14.35976 -14.14611 -14.11234 -13.99365 -13.79443 -13.55737 -13.39424 -13.32763 -13.03896 -12.86030 -12.71958 -12.66875 -12.43532 -12.18913 -12.18181 -12.08325 -11.65937 -11.46397 -11.35790 -11.31376 -11.14108 -10.79043 -10.31697 -10.07029 -10.01536 -9.72201 -9.65137 -4.80748 -0.39407 -0.22787 -0.04478 0.04891 0.39416 1.34855 1.56460 1.67130 1.88159 1.92131 2.25064 2.51416 2.98386 3.28440 3.35940 3.42737 3.47324 3.49977 3.57119 3.58493 3.68863 3.81043 3.81581 3.96201 4.02043 4.04492 4.09098 4.15911 4.34985 4.37835 4.41753 4.47405 4.54258 4.59118 4.65974 4.67881 4.70739 4.72684 4.75479 4.78371 4.81177 4.85017 4.92784 4.96683 4.97921 5.02943 5.06904 5.16546 5.30655 5.34071 5.38784 5.49085 5.60380 5.70353 6.26029 6.62001 6.97688 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.117 4.117 2 C -0.028 4.028 3 C -0.131 4.131 4 C -0.039 4.039 5 C -0.126 4.126 6 C -0.138 4.138 7 C -0.091 4.091 8 O -0.546 6.546 9 Si 0.791 3.209 10 C -0.086 4.086 11 C -0.161 4.161 12 C 0.558 3.442 13 O -0.556 6.556 14 N -0.702 5.702 15 C 0.112 3.888 16 H 0.092 0.908 17 C -0.143 4.143 18 C -0.064 4.064 19 H 0.119 0.881 20 C -0.072 4.072 21 C -0.064 4.064 22 C -0.142 4.142 23 Br -0.042 7.042 24 C 0.098 3.902 25 F -0.139 7.139 26 C -0.143 4.143 27 C -0.065 4.065 28 C -0.128 4.128 29 H 0.070 0.930 30 H 0.078 0.922 31 H 0.076 0.924 32 H 0.153 0.847 33 H 0.091 0.909 34 H 0.086 0.914 35 H 0.082 0.918 36 H 0.098 0.902 37 H 0.373 0.627 38 H -0.278 1.278 39 H -0.260 1.260 40 H 0.129 0.871 41 H 0.406 0.594 42 H 0.070 0.930 43 H 0.101 0.899 44 H 0.151 0.849 45 H 0.163 0.837 46 H 0.170 0.830 47 H 0.106 0.894 48 H 0.087 0.913 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 7.663 6.364 -0.832 9.996 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.173 4.173 2 C -0.029 4.029 3 C -0.149 4.149 4 C -0.040 4.040 5 C -0.182 4.182 6 C -0.138 4.138 7 C -0.199 4.199 8 O -0.354 6.354 9 Si 0.692 3.308 10 C -0.104 4.104 11 C -0.164 4.164 12 C 0.347 3.653 13 O -0.436 6.436 14 N -0.354 5.354 15 C 0.007 3.993 16 H 0.111 0.889 17 C -0.181 4.181 18 C -0.082 4.082 19 H 0.137 0.863 20 C -0.074 4.074 21 C -0.084 4.084 22 C -0.222 4.222 23 Br 0.044 6.956 24 C 0.076 3.924 25 F -0.117 7.117 26 C -0.162 4.162 27 C -0.083 4.083 28 C -0.165 4.165 29 H 0.088 0.912 30 H 0.096 0.904 31 H 0.095 0.905 32 H 0.171 0.829 33 H 0.109 0.891 34 H 0.105 0.895 35 H 0.101 0.899 36 H 0.115 0.885 37 H 0.224 0.776 38 H -0.205 1.205 39 H -0.186 1.186 40 H 0.147 0.853 41 H 0.243 0.757 42 H 0.089 0.911 43 H 0.119 0.881 44 H 0.169 0.831 45 H 0.181 0.819 46 H 0.187 0.813 47 H 0.124 0.876 48 H 0.106 0.894 Dipole moment (debyes) X Y Z Total from point charges 6.278 4.494 -0.972 7.782 hybrid contribution -0.999 0.628 0.077 1.183 sum 5.279 5.122 -0.895 7.409 Atomic orbital electron populations 1.21021 0.89820 1.03417 1.03088 1.20276 0.97192 0.91904 0.93575 1.21279 0.93807 0.98015 1.01763 1.20355 0.93699 0.95941 0.93988 1.21070 1.00427 0.92407 1.04262 1.20334 0.97246 0.92761 1.03488 1.25470 0.89983 1.15519 0.88915 1.86770 1.75221 1.40960 1.32463 0.92380 0.90798 0.70775 0.76883 1.21202 0.92893 0.98247 0.98056 1.19717 0.93532 0.93258 1.09937 1.18433 0.86848 0.84329 0.75666 1.90736 1.14808 1.87436 1.50578 1.45567 1.10973 1.05009 1.73829 1.21926 0.96884 0.82305 0.98165 0.88937 1.23584 0.97958 0.99447 0.97138 1.21626 0.99467 0.90798 0.96315 0.86318 1.19868 0.92749 0.95926 0.98816 1.21032 1.00366 0.89939 0.97045 1.22073 0.92466 0.97244 1.10450 1.96800 1.33811 1.67399 1.97631 1.17771 0.94667 0.79610 1.00314 1.91534 1.96930 1.34985 1.88267 1.21464 0.97675 0.94671 1.02403 1.21443 0.98706 0.93998 0.94128 1.23430 1.00303 0.97026 0.95784 0.91186 0.90350 0.90507 0.82925 0.89074 0.89500 0.89942 0.88461 0.77597 1.20474 1.18552 0.85343 0.75704 0.91086 0.88097 0.83126 0.81899 0.81284 0.87570 0.89399 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.12 -0.59 8.73 71.24 0.62 0.04 16 2 C -0.03 -0.14 5.91 -19.61 -0.12 -0.25 16 3 C -0.13 -0.06 9.31 22.23 0.21 0.15 16 4 C -0.04 0.06 5.87 -19.81 -0.12 -0.06 16 5 C -0.13 0.98 9.27 71.23 0.66 1.64 16 6 C -0.14 -0.03 5.26 -19.90 -0.10 -0.13 16 7 C -0.09 0.31 1.96 71.24 0.14 0.45 16 8 O -0.55 1.09 12.64 -148.98 -1.88 -0.79 16 9 Si 0.79 -3.70 30.40 68.60 2.09 -1.61 16 10 C -0.09 -0.21 8.13 22.53 0.18 -0.03 16 11 C -0.16 -0.90 5.87 -20.09 -0.12 -1.02 16 12 C 0.56 3.95 7.70 86.79 0.67 4.62 16 13 O -0.56 -7.16 12.96 -3.88 -0.05 -7.21 16 14 N -0.70 -0.61 5.21 -442.91 -2.31 -2.92 16 15 C 0.11 -0.11 4.32 45.52 0.20 0.09 16 16 H 0.09 0.28 7.46 -2.39 -0.02 0.26 16 17 C -0.14 0.44 7.25 31.12 0.23 0.67 16 18 C -0.06 0.40 3.86 -11.01 -0.04 0.36 16 19 H 0.12 -1.10 8.09 -2.38 -0.02 -1.12 16 20 C -0.07 0.29 5.29 -19.86 -0.11 0.18 16 21 C -0.06 0.05 8.36 22.28 0.19 0.24 16 22 C -0.14 -0.48 6.23 22.35 0.14 -0.34 16 23 Br -0.04 -0.22 33.28 -20.37 -0.68 -0.90 16 24 C 0.10 0.36 7.27 22.39 0.16 0.53 16 25 F -0.14 -1.03 16.73 44.97 0.75 -0.28 16 26 C -0.14 0.28 10.03 22.31 0.22 0.50 16 27 C -0.06 0.34 9.71 22.27 0.22 0.56 16 28 C -0.13 0.70 7.29 31.12 0.23 0.92 16 29 H 0.07 0.44 8.14 -2.38 -0.02 0.42 16 30 H 0.08 0.05 8.04 -2.39 -0.02 0.04 16 31 H 0.08 0.71 5.87 -2.39 -0.01 0.69 16 32 H 0.15 -0.61 8.06 -2.91 -0.02 -0.63 16 33 H 0.09 -0.83 8.14 -2.39 -0.02 -0.85 16 34 H 0.09 -0.80 8.08 -2.39 -0.02 -0.82 16 35 H 0.08 -0.84 4.96 -2.39 -0.01 -0.86 16 36 H 0.10 -0.73 7.37 -2.39 -0.02 -0.75 16 37 H 0.37 -2.67 6.85 -74.06 -0.51 -3.18 16 38 H -0.28 0.09 6.80 99.48 0.68 0.77 16 39 H -0.26 0.65 7.11 99.48 0.71 1.36 16 40 H 0.13 -0.03 3.32 -2.91 -0.01 -0.04 16 41 H 0.41 -1.27 6.77 -92.71 -0.63 -1.90 16 42 H 0.07 -0.08 8.14 -2.39 -0.02 -0.10 16 43 H 0.10 -0.36 6.29 -2.39 -0.02 -0.38 16 44 H 0.15 -0.45 6.64 -2.91 -0.02 -0.47 16 45 H 0.16 -0.95 8.06 -2.91 -0.02 -0.98 16 46 H 0.17 -1.91 8.05 -2.91 -0.02 -1.94 16 47 H 0.11 -0.62 7.73 -2.39 -0.02 -0.64 16 48 H 0.09 -0.57 8.14 -2.39 -0.02 -0.59 16 Total: 0.00 -17.59 406.98 1.29 -16.30 By element: Atomic # 1 Polarization: -11.62 SS G_CDS: -0.08 Total: -11.70 kcal Atomic # 6 Polarization: 5.65 SS G_CDS: 3.46 Total: 9.10 kcal Atomic # 7 Polarization: -0.61 SS G_CDS: -2.31 Total: -2.92 kcal Atomic # 8 Polarization: -6.06 SS G_CDS: -1.93 Total: -8.00 kcal Atomic # 9 Polarization: -1.03 SS G_CDS: 0.75 Total: -0.28 kcal Atomic # 14 Polarization: -3.70 SS G_CDS: 2.09 Total: -1.61 kcal Atomic # 35 Polarization: -0.22 SS G_CDS: -0.68 Total: -0.90 kcal Total: -17.59 1.29 -16.30 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9650940_9599494.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -6.383 kcal (2) G-P(sol) polarization free energy of solvation -17.589 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -23.972 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.292 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -16.297 kcal (6) G-S(sol) free energy of system = (1) + (5) -22.681 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.79 seconds