Wall clock time and date at job start Tue Mar 9 2021 12:59:50 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46494 * 1 3 3 C 1.35538 * 125.67687 * 2 1 4 4 C 1.35448 * 108.87147 * 179.83118 * 3 2 1 5 5 C 1.50694 * 126.06993 * 180.16344 * 4 3 2 6 6 O 1.42897 * 109.47412 * 300.28653 * 5 4 3 7 7 Si 1.86307 * 109.47517 * 180.28532 * 5 4 3 8 8 H 1.48497 * 109.46996 * 180.02562 * 7 5 4 9 9 H 1.48499 * 109.46891 * 300.00127 * 7 5 4 10 10 H 1.48497 * 109.46689 * 60.00353 * 7 5 4 11 11 C 1.39842 * 107.86554 * 0.43025 * 4 3 2 12 12 C 1.37654 * 125.67988 * 180.30820 * 2 1 3 13 13 C 1.46679 * 126.23031 * 359.97438 * 12 2 1 14 14 O 1.21690 * 120.00217 * 5.03370 * 13 12 2 15 15 N 1.34774 * 119.99623 * 185.02890 * 13 12 2 16 16 C 1.46502 * 119.99814 * 185.09798 * 15 13 12 17 17 C 1.53006 * 109.46954 * 180.02562 * 16 15 13 18 18 C 1.53001 * 109.46897 * 180.02562 * 17 16 15 19 19 Si 1.86296 * 109.46996 * 179.97438 * 18 17 16 20 20 C 1.86298 * 109.46876 * 60.00309 * 19 18 17 21 21 C 1.86301 * 109.47012 * 179.97438 * 19 18 17 22 22 C 1.86295 * 109.47472 * 300.00211 * 19 18 17 23 23 H 1.09003 * 109.47030 * 264.16177 * 1 2 3 24 24 H 1.09000 * 109.47263 * 144.16388 * 1 2 3 25 25 H 1.09003 * 109.47552 * 24.16093 * 1 2 3 26 26 H 1.07999 * 125.56117 * 359.97438 * 3 2 1 27 27 H 1.09004 * 109.47100 * 60.28694 * 5 4 3 28 28 H 0.96705 * 114.00832 * 179.97438 * 6 5 4 29 29 H 1.08004 * 126.45841 * 179.71557 * 11 4 3 30 30 H 0.97003 * 120.00474 * 5.10339 * 15 13 12 31 31 H 1.08995 * 109.47463 * 300.00149 * 16 15 13 32 32 H 1.09003 * 109.46765 * 60.00686 * 16 15 13 33 33 H 1.09003 * 109.46745 * 299.99832 * 17 16 15 34 34 H 1.08996 * 109.47416 * 60.00247 * 17 16 15 35 35 H 1.08999 * 109.47345 * 300.00095 * 18 17 16 36 36 H 1.09003 * 109.46976 * 60.00161 * 18 17 16 37 37 H 1.09003 * 109.47685 * 59.99936 * 20 19 18 38 38 H 1.09005 * 109.47411 * 179.97438 * 20 19 18 39 39 H 1.09003 * 109.47397 * 299.99625 * 20 19 18 40 40 H 1.09003 * 109.46841 * 60.00626 * 21 19 18 41 41 H 1.09007 * 109.46977 * 180.02562 * 21 19 18 42 42 H 1.08995 * 109.47429 * 300.00063 * 21 19 18 43 43 H 1.09003 * 109.47036 * 60.00231 * 22 19 18 44 44 H 1.09005 * 109.46989 * 179.97438 * 22 19 18 45 45 H 1.09003 * 109.47299 * 299.99936 * 22 19 18 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4649 0.0000 0.0000 3 6 2.2554 1.1010 0.0000 4 6 3.5520 0.7094 0.0038 5 6 4.7535 1.6189 0.0086 6 8 4.7270 2.4493 -1.1540 7 14 6.3089 0.5934 0.0038 8 1 7.4928 1.4897 0.0091 9 1 6.3365 -0.2696 1.2120 10 1 6.3370 -0.2574 -1.2130 11 6 3.5779 -0.6888 -0.0038 12 6 2.2678 -1.1181 -0.0060 13 6 1.8124 -2.5124 -0.0130 14 8 0.6255 -2.7644 -0.1063 15 7 2.7084 -3.5144 0.0839 16 6 2.2667 -4.9062 -0.0352 17 6 3.4714 -5.8380 0.1114 18 6 3.0101 -7.2914 -0.0136 19 14 4.4771 -8.4259 0.1641 20 6 5.2648 -8.1657 1.8322 21 6 3.9153 -10.1957 0.0128 22 6 5.7179 -8.0510 -1.1739 23 1 -0.3633 -0.1045 1.0224 24 1 -0.3634 -0.8331 -0.6017 25 1 -0.3634 0.9376 -0.4206 26 1 1.9080 2.1236 -0.0004 27 1 4.7329 2.2435 0.9017 28 1 5.4724 3.0623 -1.2168 29 1 4.4583 -1.3144 -0.0075 30 1 3.6459 -3.3142 0.2325 31 1 1.5409 -5.1253 0.7480 32 1 1.8055 -5.0587 -1.0110 33 1 4.1974 -5.6189 -0.6716 34 1 3.9322 -5.6853 1.0873 35 1 2.2838 -7.5107 0.7691 36 1 2.5496 -7.4438 -0.9897 37 1 4.5389 -8.3851 2.6152 38 1 6.1229 -8.8298 1.9365 39 1 5.5935 -7.1302 1.9213 40 1 3.4541 -10.3483 -0.9631 41 1 4.7735 -10.8596 0.1172 42 1 3.1895 -10.4149 0.7959 43 1 6.0465 -7.0155 -1.0848 44 1 6.5764 -8.7145 -1.0696 45 1 5.2570 -8.2032 -2.1499 RHF calculation, no. of doubly occupied orbitals= 54 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_9704008_10803934.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:59:50 Heat of formation + Delta-G solvation = -77.656191 kcal Electronic energy + Delta-G solvation = -21908.020884 eV Core-core repulsion = 18663.280676 eV Total energy + Delta-G solvation = -3244.740208 eV No. of doubly occupied orbitals = 54 Molecular weight (most abundant/longest-lived isotopes) = 298.163 amu Computer time = 0.31 seconds Orbital eigenvalues (eV) -42.44496 -40.07733 -37.66686 -36.72994 -34.29117 -33.41992 -30.74992 -29.55284 -28.52268 -28.45883 -28.45811 -26.87731 -25.51929 -23.34942 -22.55408 -20.94968 -20.31041 -18.65802 -18.34697 -17.00710 -16.86612 -16.64295 -16.28061 -15.93474 -15.29575 -15.11823 -14.98831 -14.52700 -14.49905 -14.25296 -14.13926 -14.08853 -13.96614 -13.52293 -13.44377 -13.39996 -13.28997 -13.19589 -13.12928 -13.12781 -13.09032 -12.62228 -12.38745 -12.04323 -11.87437 -11.81022 -11.01857 -10.84845 -10.83228 -10.56050 -10.27847 -10.09048 -9.63598 -9.12182 0.52012 1.23590 1.47662 1.52107 1.64503 1.69124 1.78185 1.83941 1.84695 2.00374 2.39664 2.43752 2.60645 3.53401 3.80030 3.84812 3.99958 4.08038 4.11126 4.22753 4.24660 4.33772 4.36777 4.55713 4.62632 4.64807 4.68607 4.70161 4.71257 4.72494 4.73297 4.73587 4.76009 4.81871 4.96204 5.11923 5.19756 5.29936 5.41982 5.47809 5.51814 5.51995 5.72813 5.97797 6.21585 6.51326 6.69285 7.23528 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.066 3.934 2 N -0.408 5.408 3 C 0.054 3.946 4 C -0.168 4.168 5 C -0.046 4.046 6 O -0.549 6.549 7 Si 0.948 3.052 8 H -0.259 1.259 9 H -0.251 1.251 10 H -0.249 1.249 11 C -0.141 4.141 12 C -0.047 4.047 13 C 0.590 3.410 14 O -0.547 6.547 15 N -0.722 5.722 16 C 0.122 3.878 17 C -0.122 4.122 18 C -0.411 4.411 19 Si 1.012 2.988 20 C -0.451 4.451 21 C -0.452 4.452 22 C -0.452 4.452 23 H 0.078 0.922 24 H 0.102 0.898 25 H 0.086 0.914 26 H 0.174 0.826 27 H 0.070 0.930 28 H 0.377 0.623 29 H 0.143 0.857 30 H 0.403 0.597 31 H 0.070 0.930 32 H 0.069 0.931 33 H 0.072 0.928 34 H 0.072 0.928 35 H 0.079 0.921 36 H 0.079 0.921 37 H 0.068 0.932 38 H 0.068 0.932 39 H 0.068 0.932 40 H 0.068 0.932 41 H 0.068 0.932 42 H 0.068 0.932 43 H 0.068 0.932 44 H 0.068 0.932 45 H 0.068 0.932 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.820 0.467 1.396 3.181 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.075 4.075 2 N -0.080 5.080 3 C -0.082 4.082 4 C -0.174 4.174 5 C -0.157 4.157 6 O -0.354 6.354 7 Si 0.771 3.229 8 H -0.183 1.183 9 H -0.174 1.174 10 H -0.172 1.172 11 C -0.167 4.167 12 C -0.161 4.161 13 C 0.378 3.622 14 O -0.426 6.426 15 N -0.374 5.374 16 C -0.001 4.001 17 C -0.160 4.160 18 C -0.497 4.497 19 Si 1.208 2.792 20 C -0.559 4.559 21 C -0.560 4.560 22 C -0.559 4.559 23 H 0.097 0.903 24 H 0.120 0.880 25 H 0.105 0.895 26 H 0.191 0.809 27 H 0.088 0.912 28 H 0.224 0.776 29 H 0.160 0.840 30 H 0.237 0.763 31 H 0.088 0.912 32 H 0.087 0.913 33 H 0.091 0.909 34 H 0.091 0.909 35 H 0.098 0.902 36 H 0.098 0.902 37 H 0.087 0.913 38 H 0.087 0.913 39 H 0.087 0.913 40 H 0.087 0.913 41 H 0.087 0.913 42 H 0.087 0.913 43 H 0.087 0.913 44 H 0.087 0.913 45 H 0.087 0.913 Dipole moment (debyes) X Y Z Total from point charges 1.731 -0.615 1.198 2.193 hybrid contribution 0.490 0.748 0.174 0.911 sum 2.221 0.134 1.372 2.614 Atomic orbital electron populations 1.22314 0.75558 1.05156 1.04440 1.43888 1.07071 1.04872 1.52192 1.21866 0.89761 0.91599 1.05022 1.18622 0.93138 0.92744 1.12908 1.23998 1.04488 0.96946 0.90250 1.86514 1.51278 1.54510 1.43142 0.85741 0.75469 0.80102 0.81618 1.18326 1.17437 1.17198 1.21115 0.94761 0.94520 1.06318 1.19889 0.89951 0.87709 1.18504 1.16950 0.85555 0.83486 0.76235 1.90804 1.16126 1.84899 1.50745 1.45705 1.11286 1.06200 1.74169 1.21537 0.97471 0.78625 1.02492 1.21440 0.97369 0.94382 1.02819 1.26140 1.14703 1.03459 1.05362 0.79168 0.66449 0.66572 0.67035 1.26171 1.07352 1.04667 1.17671 1.26145 1.05927 1.19348 1.04540 1.26171 1.11719 1.05022 1.12960 0.90326 0.87976 0.89504 0.80921 0.91180 0.77575 0.83973 0.76265 0.91180 0.91289 0.90946 0.90938 0.90231 0.90237 0.91290 0.91328 0.91295 0.91275 0.91284 0.91279 0.91292 0.91325 0.91277 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.07 0.03 10.49 59.84 0.63 0.66 16 2 N -0.41 -0.98 3.16 -120.24 -0.38 -1.36 16 3 C 0.05 0.09 11.27 -16.91 -0.19 -0.10 16 4 C -0.17 -0.31 5.44 -105.02 -0.57 -0.89 16 5 C -0.05 0.01 2.99 36.00 0.11 0.11 16 6 O -0.55 -0.20 12.85 -35.23 -0.45 -0.66 16 7 Si 0.95 -0.52 25.92 -169.99 -4.41 -4.92 16 8 H -0.26 0.10 7.11 56.52 0.40 0.50 16 9 H -0.25 0.06 7.11 56.52 0.40 0.47 16 10 H -0.25 -0.23 7.11 56.52 0.40 0.17 16 11 C -0.14 -0.26 8.83 -39.12 -0.35 -0.60 16 12 C -0.05 -0.15 6.89 -81.98 -0.56 -0.71 16 13 C 0.59 2.17 7.77 -12.85 -0.10 2.07 16 14 O -0.55 -3.55 14.78 5.20 0.08 -3.47 16 15 N -0.72 -0.52 5.53 -61.62 -0.34 -0.86 16 16 C 0.12 0.01 5.68 -4.04 -0.02 -0.01 16 17 C -0.12 0.28 4.70 -26.73 -0.13 0.16 16 18 C -0.41 1.06 4.45 37.16 0.17 1.23 16 19 Si 1.01 -3.37 12.19 -169.99 -2.07 -5.45 16 20 C -0.45 0.95 8.65 101.05 0.87 1.82 16 21 C -0.45 0.76 8.65 101.05 0.87 1.64 16 22 C -0.45 0.93 8.65 101.05 0.87 1.81 16 23 H 0.08 -0.01 8.14 -51.93 -0.42 -0.43 16 24 H 0.10 0.21 6.54 -51.93 -0.34 -0.13 16 25 H 0.09 -0.17 8.12 -51.93 -0.42 -0.59 16 26 H 0.17 -0.13 8.06 -52.49 -0.42 -0.55 16 27 H 0.07 -0.13 7.96 -51.93 -0.41 -0.54 16 28 H 0.38 -1.51 8.74 45.56 0.40 -1.11 16 29 H 0.14 -0.07 5.81 -52.48 -0.30 -0.37 16 30 H 0.40 -0.69 7.42 -40.82 -0.30 -0.99 16 31 H 0.07 0.08 8.14 -51.93 -0.42 -0.35 16 32 H 0.07 0.07 8.14 -51.93 -0.42 -0.35 16 33 H 0.07 -0.22 7.79 -51.93 -0.40 -0.63 16 34 H 0.07 -0.23 7.79 -51.93 -0.40 -0.63 16 35 H 0.08 -0.19 7.96 -51.93 -0.41 -0.61 16 36 H 0.08 -0.19 7.96 -51.93 -0.41 -0.61 16 37 H 0.07 -0.13 7.96 -51.93 -0.41 -0.54 16 38 H 0.07 -0.12 7.96 -51.93 -0.41 -0.53 16 39 H 0.07 -0.16 7.79 -51.93 -0.40 -0.56 16 40 H 0.07 -0.10 7.96 -51.93 -0.41 -0.52 16 41 H 0.07 -0.10 7.96 -51.93 -0.41 -0.51 16 42 H 0.07 -0.11 7.96 -51.93 -0.41 -0.52 16 43 H 0.07 -0.15 7.79 -51.93 -0.40 -0.56 16 44 H 0.07 -0.12 7.96 -51.93 -0.41 -0.53 16 45 H 0.07 -0.12 7.96 -51.93 -0.41 -0.54 16 LS Contribution 370.13 15.07 5.58 5.58 Total: 0.00 -7.91 370.13 -7.61 -15.51 By element: Atomic # 1 Polarization: -4.34 SS G_CDS: -7.21 Total: -11.56 kcal Atomic # 6 Polarization: 5.58 SS G_CDS: 1.60 Total: 7.19 kcal Atomic # 7 Polarization: -1.50 SS G_CDS: -0.72 Total: -2.22 kcal Atomic # 8 Polarization: -3.75 SS G_CDS: -0.38 Total: -4.13 kcal Atomic # 14 Polarization: -3.89 SS G_CDS: -6.48 Total: -10.37 kcal Total LS contribution 5.58 Total: 5.58 kcal Total: -7.91 -7.61 -15.51 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9704008_10803934.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -62.143 kcal (2) G-P(sol) polarization free energy of solvation -7.907 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -70.050 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.606 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -15.513 kcal (6) G-S(sol) free energy of system = (1) + (5) -77.656 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.31 seconds