Wall clock time and date at job start Tue Mar 9 2021 13:00:43 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50699 * 1 3 3 C 1.35446 * 125.56215 * 2 1 4 4 C 1.50704 * 126.07249 * 0.02562 * 3 2 1 5 5 O 1.42900 * 109.47207 * 129.39938 * 4 3 2 6 6 Si 1.86292 * 109.47129 * 249.39923 * 4 3 2 7 7 H 1.48506 * 109.46861 * 185.05903 * 6 4 3 8 8 H 1.48500 * 109.47566 * 305.06214 * 6 4 3 9 9 H 1.48499 * 109.47051 * 65.06445 * 6 4 3 10 10 C 1.39843 * 107.86368 * 180.02562 * 3 2 1 11 11 C 1.50695 * 126.45852 * 180.02562 * 10 3 2 12 12 C 1.37870 * 107.08107 * 0.02562 * 10 3 2 13 13 C 1.46683 * 126.22763 * 180.02562 * 12 10 3 14 14 O 1.21688 * 120.00216 * 0.02562 * 13 12 10 15 15 N 1.34783 * 119.99693 * 179.97438 * 13 12 10 16 16 C 1.46499 * 119.99864 * 179.97438 * 15 13 12 17 17 C 1.52998 * 109.46917 * 180.02562 * 16 15 13 18 18 C 1.53006 * 109.47158 * 179.97438 * 17 16 15 19 19 Si 1.86296 * 109.47183 * 179.97438 * 18 17 16 20 20 C 1.86289 * 109.47267 * 60.00213 * 19 18 17 21 21 C 1.86302 * 109.46921 * 180.02562 * 19 18 17 22 22 C 1.86307 * 109.47191 * 299.99955 * 19 18 17 23 23 N 1.35530 * 125.56253 * 179.70063 * 2 1 3 24 24 H 1.09008 * 109.47313 * 84.71080 * 1 2 3 25 25 H 1.08997 * 109.47450 * 324.70732 * 1 2 3 26 26 H 1.08995 * 109.47189 * 204.70514 * 1 2 3 27 27 H 1.08999 * 109.46477 * 9.40372 * 4 3 2 28 28 H 0.96691 * 114.00130 * 180.02562 * 5 4 3 29 29 H 1.09004 * 109.47442 * 89.99623 * 11 10 3 30 30 H 1.09004 * 109.47418 * 209.99864 * 11 10 3 31 31 H 1.09000 * 109.47255 * 330.00111 * 11 10 3 32 32 H 0.96995 * 120.00126 * 0.02562 * 15 13 12 33 33 H 1.08997 * 109.47320 * 300.00175 * 16 15 13 34 34 H 1.08997 * 109.47190 * 60.00079 * 16 15 13 35 35 H 1.08997 * 109.47101 * 300.00104 * 17 16 15 36 36 H 1.08997 * 109.47293 * 59.99937 * 17 16 15 37 37 H 1.08998 * 109.46932 * 300.00785 * 18 17 16 38 38 H 1.09004 * 109.46379 * 60.00101 * 18 17 16 39 39 H 1.09006 * 109.47294 * 59.99883 * 20 19 18 40 40 H 1.09000 * 109.47642 * 179.97438 * 20 19 18 41 41 H 1.09004 * 109.47252 * 299.99740 * 20 19 18 42 42 H 1.09004 * 109.47203 * 60.00205 * 21 19 18 43 43 H 1.09003 * 109.46921 * 179.97438 * 21 19 18 44 44 H 1.08997 * 109.47227 * 299.99909 * 21 19 18 45 45 H 1.09000 * 109.46870 * 59.99952 * 22 19 18 46 46 H 1.08993 * 109.46722 * 180.02562 * 22 19 18 47 47 H 1.08997 * 109.47073 * 300.00198 * 22 19 18 48 48 H 0.97002 * 125.67951 * 359.96340 * 23 2 1 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.2947 1.1018 0.0000 4 6 1.8199 2.5321 0.0005 5 8 2.4818 3.2534 1.0416 6 14 2.2102 3.3166 -1.6435 7 1 1.8542 4.7577 -1.6011 8 1 3.6604 3.1731 -1.9287 9 1 1.4268 2.6444 -2.7110 10 6 3.6270 0.6767 -0.0006 11 6 4.8485 1.5591 -0.0003 12 6 3.6121 -0.7019 -0.0015 13 6 4.7860 -1.5815 -0.0019 14 8 5.9048 -1.1030 -0.0008 15 7 4.6252 -2.9197 -0.0023 16 6 5.7976 -3.7982 -0.0032 17 6 5.3406 -5.2584 -0.0042 18 6 6.5650 -6.1760 -0.0058 19 14 6.0086 -7.9539 -0.0062 20 6 4.9837 -8.2835 -1.5265 21 6 7.4995 -9.0711 -0.0073 22 6 4.9864 -8.2851 1.5158 23 7 2.2952 -1.1025 0.0058 24 1 -0.3634 0.0947 -1.0234 25 1 -0.3634 0.8387 0.5937 26 1 -0.3633 -0.9336 0.4295 27 1 0.7433 2.5573 0.1689 28 1 2.2238 4.1833 1.1012 29 1 5.1433 1.7713 1.0275 30 1 5.6642 1.0508 -0.5146 31 1 4.6218 2.4937 -0.5134 32 1 3.7334 -3.3011 -0.0028 33 1 6.3961 -3.6046 -0.8934 34 1 6.3969 -3.6053 0.8865 35 1 4.7419 -5.4523 0.8858 36 1 4.7415 -5.4510 -0.8941 37 1 7.1634 -5.9818 -0.8959 38 1 7.1644 -5.9834 0.8841 39 1 5.5818 -8.0898 -2.4169 40 1 4.6585 -9.3239 -1.5270 41 1 4.1114 -7.6299 -1.5254 42 1 8.0988 -8.8782 0.8825 43 1 7.1739 -10.1114 -0.0071 44 1 8.0979 -8.8775 -0.8975 45 1 4.1141 -7.6314 1.5169 46 1 4.6613 -9.3254 1.5157 47 1 5.5861 -8.0922 2.4053 48 1 1.9833 -2.0210 0.0111 RHF calculation, no. of doubly occupied orbitals= 57 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_9704008_12297754.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:00:43 Heat of formation + Delta-G solvation = -94.003580 kcal Electronic energy + Delta-G solvation = -23903.347773 eV Core-core repulsion = 20502.361070 eV Total energy + Delta-G solvation = -3400.986703 eV No. of doubly occupied orbitals = 57 Molecular weight (most abundant/longest-lived isotopes) = 312.178 amu Computer time = 0.36 seconds Orbital eigenvalues (eV) -42.53527 -40.09324 -37.59785 -36.77274 -33.97500 -33.52570 -32.74612 -29.63465 -29.16012 -28.50014 -28.49345 -28.01964 -26.73127 -25.55080 -22.62906 -22.24159 -20.54744 -19.88525 -19.17144 -18.25936 -16.99153 -16.84207 -16.69012 -16.08385 -15.74279 -15.21646 -15.04808 -14.77362 -14.49577 -14.30059 -14.22188 -14.14399 -14.07074 -13.92867 -13.89297 -13.68788 -13.48257 -13.44171 -13.24279 -13.16470 -13.15619 -13.11434 -13.03595 -12.66340 -12.46452 -12.36081 -12.12347 -11.90825 -11.43932 -10.92654 -10.86836 -10.83705 -10.56715 -10.47666 -10.10274 -9.32619 -8.87253 0.52277 1.17786 1.49571 1.61059 1.70063 1.76564 1.79774 1.81424 2.03912 2.13242 2.21064 2.50816 2.57034 3.54579 3.80718 3.85365 3.96242 4.03710 4.10202 4.20643 4.21305 4.36990 4.48270 4.58282 4.60850 4.60971 4.64986 4.67501 4.68695 4.70849 4.70875 4.72072 4.73989 4.83396 4.95755 5.08826 5.11272 5.22927 5.26951 5.37594 5.43916 5.45236 5.47714 5.49136 5.56357 5.82437 6.04867 6.36877 6.55451 6.76238 7.27625 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.096 4.096 2 C 0.075 3.925 3 C -0.174 4.174 4 C -0.037 4.037 5 O -0.542 6.542 6 Si 0.935 3.065 7 H -0.256 1.256 8 H -0.240 1.240 9 H -0.255 1.255 10 C -0.039 4.039 11 C -0.095 4.095 12 C -0.069 4.069 13 C 0.590 3.410 14 O -0.523 6.523 15 N -0.736 5.736 16 C 0.120 3.880 17 C -0.121 4.121 18 C -0.412 4.412 19 Si 1.012 2.988 20 C -0.451 4.451 21 C -0.452 4.452 22 C -0.451 4.451 23 N -0.537 5.537 24 H 0.081 0.919 25 H 0.087 0.913 26 H 0.070 0.930 27 H 0.069 0.931 28 H 0.376 0.624 29 H 0.072 0.928 30 H 0.077 0.923 31 H 0.066 0.934 32 H 0.393 0.607 33 H 0.069 0.931 34 H 0.070 0.930 35 H 0.070 0.930 36 H 0.070 0.930 37 H 0.079 0.921 38 H 0.079 0.921 39 H 0.068 0.932 40 H 0.068 0.932 41 H 0.067 0.933 42 H 0.068 0.932 43 H 0.068 0.932 44 H 0.068 0.932 45 H 0.067 0.933 46 H 0.068 0.932 47 H 0.068 0.932 48 H 0.415 0.585 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -5.439 -2.782 -0.536 6.132 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.153 4.153 2 C -0.043 4.043 3 C -0.181 4.181 4 C -0.148 4.148 5 O -0.347 6.347 6 Si 0.757 3.243 7 H -0.180 1.180 8 H -0.163 1.163 9 H -0.179 1.179 10 C -0.047 4.047 11 C -0.151 4.151 12 C -0.180 4.180 13 C 0.378 3.622 14 O -0.399 6.399 15 N -0.388 5.388 16 C -0.003 4.003 17 C -0.159 4.159 18 C -0.497 4.497 19 Si 1.208 2.792 20 C -0.558 4.558 21 C -0.560 4.560 22 C -0.558 4.558 23 N -0.134 5.134 24 H 0.099 0.901 25 H 0.106 0.894 26 H 0.089 0.911 27 H 0.086 0.914 28 H 0.223 0.777 29 H 0.091 0.909 30 H 0.096 0.904 31 H 0.085 0.915 32 H 0.226 0.774 33 H 0.088 0.912 34 H 0.088 0.912 35 H 0.088 0.912 36 H 0.088 0.912 37 H 0.098 0.902 38 H 0.098 0.902 39 H 0.087 0.913 40 H 0.087 0.913 41 H 0.086 0.914 42 H 0.088 0.912 43 H 0.087 0.913 44 H 0.088 0.912 45 H 0.086 0.914 46 H 0.087 0.913 47 H 0.087 0.913 48 H 0.253 0.747 Dipole moment (debyes) X Y Z Total from point charges -4.104 -2.814 -1.238 5.128 hybrid contribution -1.032 -0.470 0.368 1.192 sum -5.136 -3.284 -0.871 6.158 Atomic orbital electron populations 1.20510 0.87310 1.03942 1.03571 1.20163 0.93486 0.85517 1.05122 1.18391 0.92537 0.92668 1.14487 1.23883 0.97761 0.91939 1.01174 1.86550 1.68110 1.26003 1.54059 0.86008 0.82609 0.79244 0.76436 1.17973 1.16277 1.17871 1.19767 0.94954 0.90800 0.99219 1.20500 0.94041 0.97753 1.02837 1.20072 0.82765 0.94046 1.21136 1.17008 0.87546 0.81240 0.76391 1.90838 1.24186 1.74953 1.49883 1.45942 1.10008 1.05954 1.76917 1.21518 0.87506 0.88445 1.02794 1.21424 0.98592 0.93224 1.02621 1.26145 1.01430 1.16805 1.05334 0.79158 0.66948 0.66089 0.66965 1.26171 1.09298 1.04878 1.15494 1.26144 1.15016 1.10339 1.04477 1.26170 1.09276 1.04878 1.15520 1.41745 1.05368 1.08191 1.58145 0.90057 0.89392 0.91146 0.91354 0.77708 0.90889 0.90444 0.91500 0.77441 0.91236 0.91210 0.91152 0.91166 0.90197 0.90192 0.91265 0.91309 0.91407 0.91245 0.91278 0.91249 0.91407 0.91311 0.91259 0.74718 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.10 0.28 10.01 36.01 0.36 0.65 16 2 C 0.08 0.02 7.13 -81.96 -0.58 -0.56 16 3 C -0.17 -0.42 4.43 -105.02 -0.46 -0.89 16 4 C -0.04 -0.02 2.78 36.01 0.10 0.08 16 5 O -0.54 -0.55 12.31 -35.23 -0.43 -0.98 16 6 Si 0.93 0.59 26.84 -169.99 -4.56 -3.97 16 7 H -0.26 -0.09 7.11 56.52 0.40 0.32 16 8 H -0.24 -0.59 5.73 56.52 0.32 -0.26 16 9 H -0.25 -0.36 7.11 56.52 0.40 0.05 16 10 C -0.04 -0.17 5.89 -104.16 -0.61 -0.78 16 11 C -0.09 -0.44 9.12 36.00 0.33 -0.11 16 12 C -0.07 -0.22 7.06 -81.98 -0.58 -0.80 16 13 C 0.59 2.30 7.79 -12.85 -0.10 2.20 16 14 O -0.52 -3.90 14.80 5.20 0.08 -3.83 16 15 N -0.74 -0.21 5.55 -61.62 -0.34 -0.55 16 16 C 0.12 0.02 5.67 -4.04 -0.02 -0.01 16 17 C -0.12 0.30 4.70 -26.73 -0.13 0.18 16 18 C -0.41 1.08 4.45 37.16 0.17 1.25 16 19 Si 1.01 -3.53 12.19 -169.99 -2.07 -5.61 16 20 C -0.45 1.04 8.65 101.05 0.87 1.92 16 21 C -0.45 0.80 8.65 101.05 0.87 1.67 16 22 C -0.45 1.03 8.65 101.05 0.87 1.90 16 23 N -0.54 0.12 5.99 -5.70 -0.03 0.09 16 24 H 0.08 -0.31 8.14 -51.92 -0.42 -0.73 16 25 H 0.09 -0.30 7.21 -51.93 -0.37 -0.67 16 26 H 0.07 -0.30 8.14 -51.93 -0.42 -0.72 16 27 H 0.07 -0.13 6.66 -51.93 -0.35 -0.48 16 28 H 0.38 -1.30 8.74 45.56 0.40 -0.90 16 29 H 0.07 0.36 8.14 -51.93 -0.42 -0.06 16 30 H 0.08 0.45 6.49 -51.93 -0.34 0.11 16 31 H 0.07 0.25 5.04 -51.93 -0.26 -0.01 16 32 H 0.39 -1.11 7.60 -40.82 -0.31 -1.42 16 33 H 0.07 0.09 8.14 -51.93 -0.42 -0.34 16 34 H 0.07 0.09 8.14 -51.93 -0.42 -0.33 16 35 H 0.07 -0.23 7.79 -51.93 -0.40 -0.64 16 36 H 0.07 -0.24 7.79 -51.93 -0.40 -0.64 16 37 H 0.08 -0.19 7.96 -51.93 -0.41 -0.60 16 38 H 0.08 -0.19 7.96 -51.93 -0.41 -0.60 16 39 H 0.07 -0.14 7.96 -51.93 -0.41 -0.55 16 40 H 0.07 -0.13 7.96 -51.93 -0.41 -0.55 16 41 H 0.07 -0.17 7.79 -51.93 -0.40 -0.58 16 42 H 0.07 -0.11 7.96 -51.93 -0.41 -0.52 16 43 H 0.07 -0.11 7.96 -51.93 -0.41 -0.52 16 44 H 0.07 -0.11 7.96 -51.93 -0.41 -0.52 16 45 H 0.07 -0.17 7.79 -51.93 -0.40 -0.57 16 46 H 0.07 -0.13 7.96 -51.93 -0.41 -0.54 16 47 H 0.07 -0.13 7.96 -51.93 -0.41 -0.55 16 48 H 0.42 -1.56 8.19 -40.82 -0.33 -1.89 16 LS Contribution 386.07 15.07 5.82 5.82 Total: 0.00 -8.71 386.07 -8.35 -17.06 By element: Atomic # 1 Polarization: -6.84 SS G_CDS: -7.89 Total: -14.73 kcal Atomic # 6 Polarization: 5.61 SS G_CDS: 1.09 Total: 6.70 kcal Atomic # 7 Polarization: -0.09 SS G_CDS: -0.38 Total: -0.46 kcal Atomic # 8 Polarization: -4.45 SS G_CDS: -0.36 Total: -4.81 kcal Atomic # 14 Polarization: -2.94 SS G_CDS: -6.63 Total: -9.57 kcal Total LS contribution 5.82 Total: 5.82 kcal Total: -8.71 -8.35 -17.06 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9704008_12297754.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -76.943 kcal (2) G-P(sol) polarization free energy of solvation -8.707 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -85.650 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.354 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.061 kcal (6) G-S(sol) free energy of system = (1) + (5) -94.004 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.36 seconds