Wall clock time and date at job start Tue Mar 9 2021 13:01:49 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 Si 1.86306 * 1 3 3 C 1.86304 * 109.46928 * 2 1 4 4 C 1.86293 * 109.47231 * 240.00204 * 2 1 3 5 5 C 1.86299 * 109.47140 * 119.99553 * 2 1 3 6 6 C 1.53003 * 109.46987 * 60.00277 * 5 2 1 7 7 C 1.52996 * 109.47301 * 179.97438 * 6 5 2 8 8 N 1.46498 * 109.47059 * 179.97438 * 7 6 5 9 9 C 1.34777 * 119.99828 * 179.72339 * 8 7 6 10 10 O 1.21593 * 119.99949 * 0.28071 * 9 8 7 11 11 C 1.47578 * 120.00056 * 180.27917 * 9 8 7 12 12 C 1.40200 * 119.83132 * 359.97438 * 11 9 8 13 13 C 1.36237 * 120.38030 * 179.97438 * 12 11 9 14 14 C 1.39880 * 119.95628 * 0.02562 * 13 12 11 15 15 C 1.46263 * 133.84080 * 179.97438 * 14 13 12 16 16 C 1.50693 * 126.47948 * 359.97438 * 15 14 13 17 17 O 1.42903 * 109.47336 * 284.99615 * 16 15 14 18 18 Si 1.86304 * 109.47097 * 165.00218 * 16 15 14 19 19 H 1.48504 * 109.46936 * 59.99772 * 18 16 15 20 20 H 1.48497 * 109.47562 * 179.97438 * 18 16 15 21 21 H 1.48502 * 109.46782 * 300.00223 * 18 16 15 22 22 C 1.34449 * 107.03544 * 179.97438 * 15 14 13 23 23 N 1.36568 * 109.98566 * 359.97438 * 22 15 14 24 24 C 1.37834 * 109.85926 * 0.02562 * 23 22 15 25 25 C 1.38647 * 133.37509 * 180.32902 * 24 23 22 26 26 H 1.08996 * 109.46824 * 299.99984 * 1 2 3 27 27 H 1.09001 * 109.46820 * 60.00327 * 1 2 3 28 28 H 1.08994 * 109.46645 * 179.97438 * 1 2 3 29 29 H 1.09003 * 109.47069 * 180.02562 * 3 2 1 30 30 H 1.09001 * 109.47103 * 299.99500 * 3 2 1 31 31 H 1.08996 * 109.47355 * 60.00341 * 3 2 1 32 32 H 1.09003 * 109.46766 * 299.99667 * 4 2 1 33 33 H 1.08993 * 109.47824 * 59.99658 * 4 2 1 34 34 H 1.09002 * 109.47559 * 180.02562 * 4 2 1 35 35 H 1.08990 * 109.47378 * 300.00327 * 5 2 1 36 36 H 1.09002 * 109.47146 * 179.97438 * 5 2 1 37 37 H 1.09004 * 109.47038 * 59.99686 * 6 5 2 38 38 H 1.09000 * 109.46939 * 300.00339 * 6 5 2 39 39 H 1.09004 * 109.47066 * 60.00027 * 7 6 5 40 40 H 1.08994 * 109.46974 * 300.00175 * 7 6 5 41 41 H 0.97001 * 120.00384 * 0.02562 * 8 7 6 42 42 H 1.08002 * 119.81159 * 0.02656 * 12 11 9 43 43 H 1.07992 * 120.02051 * 179.97438 * 13 12 11 44 44 H 1.08989 * 109.47708 * 45.00164 * 16 15 14 45 45 H 0.96698 * 114.00405 * 300.01012 * 17 16 15 46 46 H 1.07997 * 125.01004 * 180.02562 * 22 15 14 47 47 H 0.97002 * 125.07197 * 179.97438 * 23 22 15 48 48 H 1.08000 * 120.16977 * 359.92443 * 25 24 23 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 14 1.8631 0.0000 0.0000 3 6 2.4840 1.7565 0.0000 4 6 2.4841 -0.8781 -1.5211 5 6 2.4841 -0.8781 1.5212 6 6 1.9741 -2.3206 1.5212 7 6 2.4846 -3.0420 2.7702 8 7 1.9958 -4.4231 2.7705 9 6 2.3263 -5.2546 3.7783 10 8 3.0259 -4.8571 4.6898 11 6 1.8389 -6.6476 3.7755 12 6 1.0319 -7.1021 2.7230 13 6 0.5763 -8.3859 2.7089 14 6 0.9133 -9.2582 3.7492 15 6 0.6033 -10.6581 4.0381 16 6 -0.2383 -11.5816 3.1958 17 8 -1.6183 -11.2463 3.3548 18 14 0.0392 -13.3423 3.7379 19 1 -0.3442 -13.4869 5.1653 20 1 -0.7907 -14.2524 2.9083 21 1 1.4733 -13.6908 3.5728 22 6 1.2114 -10.9650 5.1973 23 7 1.8853 -9.8767 5.6734 24 6 1.7247 -8.8128 4.8119 25 6 2.1896 -7.5066 4.8149 26 1 -0.3633 0.5138 0.8900 27 1 -0.3633 0.5138 -0.8900 28 1 -0.3632 -1.0276 -0.0005 29 1 3.5740 1.7565 -0.0005 30 1 2.1207 2.2703 -0.8900 31 1 2.1207 2.2703 0.8900 32 1 2.1208 -1.9058 -1.5211 33 1 2.1208 -0.3644 -2.4111 34 1 3.5741 -0.8786 -1.5209 35 1 2.1207 -0.3643 2.4111 36 1 3.5741 -0.8785 1.5210 37 1 2.3374 -2.8345 0.6312 38 1 0.8841 -2.3206 1.5211 39 1 2.1216 -2.5283 3.6604 40 1 3.5745 -3.0420 2.7697 41 1 1.4378 -4.7403 2.0431 42 1 0.7706 -6.4308 1.9183 43 1 -0.0453 -8.7297 1.8954 44 1 0.0430 -11.4754 2.1482 45 1 -1.9384 -11.3185 4.2644 46 1 1.1733 -11.9302 5.6804 47 1 2.3996 -9.8554 6.4955 48 1 2.8161 -7.1553 5.6214 RHF calculation, no. of doubly occupied orbitals= 60 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_9704008_12335838.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:01:49 Heat of formation + Delta-G solvation = -68.387211 kcal Electronic energy + Delta-G solvation = -25384.431707 eV Core-core repulsion = 21755.415011 eV Total energy + Delta-G solvation = -3629.016696 eV No. of doubly occupied orbitals = 60 Molecular weight (most abundant/longest-lived isotopes) = 334.163 amu Computer time = 0.44 seconds Orbital eigenvalues (eV) -42.45712 -40.64748 -37.92737 -37.47062 -36.68305 -33.58301 -33.22738 -30.70959 -30.62596 -29.53732 -28.44642 -28.44337 -27.06599 -26.42077 -24.21697 -23.58637 -22.50699 -21.19873 -20.80467 -19.36384 -18.38693 -17.73121 -17.05237 -16.83414 -16.72597 -16.17457 -15.92075 -15.60637 -15.46998 -15.06569 -14.85460 -14.73126 -14.63035 -14.34558 -14.21181 -14.14617 -14.08253 -13.92819 -13.49848 -13.40615 -13.16370 -13.15154 -13.11112 -13.08206 -12.58258 -12.56593 -12.48298 -12.22078 -12.07770 -11.84040 -11.77947 -10.96217 -10.82416 -10.81508 -10.72770 -10.51686 -10.34102 -10.01198 -9.32356 -8.79115 -0.22508 0.43096 1.14481 1.34234 1.40424 1.49983 1.74652 1.84565 1.86515 1.89175 1.93793 2.08109 2.34169 2.62259 2.98569 3.55580 3.59283 3.76194 3.77951 3.89814 4.02999 4.07052 4.16555 4.26307 4.35018 4.45443 4.54663 4.59308 4.65894 4.66940 4.70509 4.72894 4.74105 4.74936 4.75204 4.77895 4.79274 4.99800 5.03092 5.15106 5.27688 5.32838 5.44379 5.46943 5.48422 5.53297 5.53503 5.56360 5.63672 6.01499 6.37195 6.57190 6.62628 7.31630 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.451 4.451 2 Si 1.012 2.988 3 C -0.452 4.452 4 C -0.451 4.451 5 C -0.411 4.411 6 C -0.122 4.122 7 C 0.119 3.881 8 N -0.727 5.727 9 C 0.561 3.439 10 O -0.540 6.540 11 C -0.120 4.120 12 C -0.114 4.114 13 C -0.071 4.071 14 C -0.062 4.062 15 C -0.209 4.209 16 C -0.043 4.043 17 O -0.540 6.540 18 Si 0.946 3.054 19 H -0.253 1.253 20 H -0.250 1.250 21 H -0.250 1.250 22 C 0.067 3.933 23 N -0.584 5.584 24 C 0.082 3.918 25 C -0.058 4.058 26 H 0.068 0.932 27 H 0.067 0.933 28 H 0.068 0.932 29 H 0.068 0.932 30 H 0.068 0.932 31 H 0.068 0.932 32 H 0.068 0.932 33 H 0.067 0.933 34 H 0.068 0.932 35 H 0.079 0.921 36 H 0.079 0.921 37 H 0.071 0.929 38 H 0.071 0.929 39 H 0.068 0.932 40 H 0.068 0.932 41 H 0.401 0.599 42 H 0.126 0.874 43 H 0.132 0.868 44 H 0.115 0.885 45 H 0.374 0.626 46 H 0.173 0.827 47 H 0.422 0.578 48 H 0.136 0.864 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.164 -1.656 -1.351 2.434 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.559 4.559 2 Si 1.208 2.792 3 C -0.560 4.560 4 C -0.559 4.559 5 C -0.497 4.497 6 C -0.159 4.159 7 C -0.004 4.004 8 N -0.380 5.380 9 C 0.349 3.651 10 O -0.418 6.418 11 C -0.125 4.125 12 C -0.134 4.134 13 C -0.089 4.089 14 C -0.067 4.067 15 C -0.217 4.217 16 C -0.155 4.155 17 O -0.345 6.345 18 Si 0.768 3.232 19 H -0.177 1.177 20 H -0.173 1.173 21 H -0.174 1.174 22 C -0.062 4.062 23 N -0.186 5.186 24 C -0.025 4.025 25 C -0.079 4.079 26 H 0.087 0.913 27 H 0.087 0.913 28 H 0.087 0.913 29 H 0.087 0.913 30 H 0.087 0.913 31 H 0.087 0.913 32 H 0.087 0.913 33 H 0.087 0.913 34 H 0.087 0.913 35 H 0.097 0.903 36 H 0.097 0.903 37 H 0.090 0.910 38 H 0.090 0.910 39 H 0.087 0.913 40 H 0.087 0.913 41 H 0.237 0.763 42 H 0.144 0.856 43 H 0.150 0.850 44 H 0.133 0.867 45 H 0.221 0.779 46 H 0.190 0.810 47 H 0.259 0.741 48 H 0.153 0.847 Dipole moment (debyes) X Y Z Total from point charges -0.396 -2.122 -0.949 2.358 hybrid contribution -0.013 0.250 0.595 0.646 sum -0.409 -1.872 -0.354 1.949 Atomic orbital electron populations 1.26169 1.20936 1.04361 1.04396 0.79161 0.66923 0.66711 0.66386 1.26146 1.06263 1.19153 1.04406 1.26170 1.06251 1.08012 1.15431 1.26141 1.06168 1.01286 1.16095 1.21430 1.01346 0.95737 0.97421 1.21522 0.99576 0.80402 0.98942 1.45953 1.53917 1.12591 1.25525 1.18167 0.79914 0.85183 0.81853 1.90794 1.37939 1.77291 1.35791 1.19454 1.02520 0.93471 0.97015 1.20698 0.98601 0.96217 0.97879 1.20214 0.99031 0.92232 0.97472 1.19142 0.99015 0.93457 0.95094 1.20717 1.07694 0.94706 0.98541 1.24260 0.82276 1.06109 1.02832 1.86519 1.22912 1.91945 1.33093 0.85805 0.81372 0.75468 0.80586 1.17708 1.17330 1.17371 1.21778 0.96478 0.92049 0.95850 1.41705 1.45554 1.08771 1.22566 1.18089 1.01888 0.89835 0.92649 1.20074 0.99509 0.89428 0.98883 0.91291 0.91340 0.91289 0.91288 0.91299 0.91281 0.91294 0.91335 0.91298 0.90259 0.90267 0.91021 0.91002 0.91342 0.91345 0.76348 0.85595 0.85004 0.86748 0.77887 0.81030 0.74053 0.84667 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.45 0.92 8.65 101.05 0.87 1.79 16 2 Si 1.01 -3.32 12.19 -169.99 -2.07 -5.39 16 3 C -0.45 0.73 8.65 101.05 0.87 1.61 16 4 C -0.45 0.93 8.65 101.05 0.87 1.80 16 5 C -0.41 1.00 4.45 37.16 0.17 1.17 16 6 C -0.12 0.27 4.70 -26.73 -0.13 0.15 16 7 C 0.12 0.04 5.67 -4.04 -0.02 0.02 16 8 N -0.73 -0.41 5.50 -61.34 -0.34 -0.74 16 9 C 0.56 2.03 7.76 -12.45 -0.10 1.93 16 10 O -0.54 -3.96 16.31 5.28 0.09 -3.87 16 11 C -0.12 -0.29 5.87 -104.95 -0.62 -0.90 16 12 C -0.11 -0.05 9.46 -39.57 -0.37 -0.42 16 13 C -0.07 -0.07 10.03 -39.69 -0.40 -0.47 16 14 C -0.06 -0.11 6.35 -105.04 -0.67 -0.78 16 15 C -0.21 -0.05 5.57 -102.74 -0.57 -0.63 16 16 C -0.04 0.04 3.06 36.00 0.11 0.15 16 17 O -0.54 -0.04 12.88 -35.23 -0.45 -0.49 16 18 Si 0.95 -1.52 26.08 -169.99 -4.43 -5.95 16 19 H -0.25 0.51 7.03 56.52 0.40 0.91 16 20 H -0.25 -0.03 7.11 56.52 0.40 0.38 16 21 H -0.25 0.20 7.11 56.52 0.40 0.61 16 22 C 0.07 -0.08 10.43 -16.78 -0.17 -0.25 16 23 N -0.58 0.44 6.07 -10.68 -0.06 0.38 16 24 C 0.08 0.14 7.26 -84.00 -0.61 -0.47 16 25 C -0.06 -0.14 9.61 -39.03 -0.37 -0.52 16 26 H 0.07 -0.12 7.96 -51.93 -0.41 -0.53 16 27 H 0.07 -0.11 7.96 -51.93 -0.41 -0.53 16 28 H 0.07 -0.15 7.79 -51.93 -0.40 -0.56 16 29 H 0.07 -0.10 7.96 -51.93 -0.41 -0.51 16 30 H 0.07 -0.09 7.96 -51.93 -0.41 -0.51 16 31 H 0.07 -0.10 7.96 -51.93 -0.41 -0.51 16 32 H 0.07 -0.15 7.79 -51.93 -0.40 -0.56 16 33 H 0.07 -0.12 7.96 -51.93 -0.41 -0.53 16 34 H 0.07 -0.12 7.96 -51.93 -0.41 -0.53 16 35 H 0.08 -0.18 7.96 -51.93 -0.41 -0.59 16 36 H 0.08 -0.18 7.96 -51.93 -0.41 -0.59 16 37 H 0.07 -0.22 7.79 -51.93 -0.40 -0.63 16 38 H 0.07 -0.22 7.79 -51.93 -0.40 -0.62 16 39 H 0.07 0.10 8.14 -51.93 -0.42 -0.33 16 40 H 0.07 0.10 8.14 -51.93 -0.42 -0.33 16 41 H 0.40 -0.88 6.46 -40.82 -0.26 -1.15 16 42 H 0.13 -0.31 6.36 -52.49 -0.33 -0.64 16 43 H 0.13 -0.06 8.06 -52.49 -0.42 -0.48 16 44 H 0.11 -0.14 7.96 -51.94 -0.41 -0.56 16 45 H 0.37 -1.15 8.70 45.56 0.40 -0.75 16 46 H 0.17 -0.67 6.29 -52.49 -0.33 -1.00 16 47 H 0.42 -1.46 8.96 -40.82 -0.37 -1.82 16 48 H 0.14 0.32 7.62 -52.49 -0.40 -0.08 16 LS Contribution 396.00 15.07 5.97 5.97 Total: 0.00 -8.83 396.00 -9.56 -18.40 By element: Atomic # 1 Polarization: -5.33 SS G_CDS: -7.12 Total: -12.45 kcal Atomic # 6 Polarization: 5.30 SS G_CDS: -1.13 Total: 4.16 kcal Atomic # 7 Polarization: 0.04 SS G_CDS: -0.40 Total: -0.36 kcal Atomic # 8 Polarization: -4.00 SS G_CDS: -0.37 Total: -4.37 kcal Atomic # 14 Polarization: -4.84 SS G_CDS: -6.51 Total: -11.34 kcal Total LS contribution 5.97 Total: 5.97 kcal Total: -8.83 -9.56 -18.40 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9704008_12335838.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -49.991 kcal (2) G-P(sol) polarization free energy of solvation -8.833 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -58.825 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.562 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.396 kcal (6) G-S(sol) free energy of system = (1) + (5) -68.387 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.44 seconds