Wall clock time and date at job start Tue Mar 9 2021 13:06:52 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 Si 1.86299 * 1 3 3 C 1.86300 * 109.47226 * 2 1 4 4 C 1.86301 * 109.47141 * 239.99662 * 2 1 3 5 5 C 1.86302 * 109.46979 * 119.99938 * 2 1 3 6 6 C 1.53008 * 109.47214 * 59.99590 * 5 2 1 7 7 C 1.52997 * 109.47307 * 180.02562 * 6 5 2 8 8 N 1.46498 * 109.47393 * 180.02562 * 7 6 5 9 9 C 1.34777 * 120.00194 * 180.02562 * 8 7 6 10 10 O 1.21552 * 120.00011 * 359.97438 * 9 8 7 11 11 C 1.47848 * 119.99886 * 180.02562 * 9 8 7 12 12 C 1.39552 * 120.13963 * 180.02562 * 11 9 8 13 13 C 1.37985 * 119.87445 * 179.97438 * 12 11 9 14 14 C 1.50703 * 119.92063 * 179.97438 * 13 12 11 15 15 O 1.42891 * 109.47179 * 300.00384 * 14 13 12 16 16 Si 1.86302 * 109.46720 * 180.02562 * 14 13 12 17 17 H 1.48494 * 109.47402 * 60.00234 * 16 14 13 18 18 H 1.48506 * 109.46796 * 180.02562 * 16 14 13 19 19 H 1.48501 * 109.47286 * 299.99940 * 16 14 13 20 20 C 1.38315 * 120.15653 * 0.02562 * 13 12 11 21 21 C 1.38469 * 120.27999 * 0.02562 * 20 13 12 22 22 Br 1.89112 * 119.93469 * 179.97438 * 21 20 13 23 23 C 1.38023 * 120.12813 * 0.02562 * 21 20 13 24 24 H 1.08999 * 109.47350 * 300.00395 * 1 2 3 25 25 H 1.09008 * 109.46715 * 59.99833 * 1 2 3 26 26 H 1.08996 * 109.47387 * 180.02562 * 1 2 3 27 27 H 1.09001 * 109.46837 * 179.97438 * 3 2 1 28 28 H 1.08996 * 109.47096 * 299.99744 * 3 2 1 29 29 H 1.08996 * 109.47347 * 60.00324 * 3 2 1 30 30 H 1.08996 * 109.47114 * 300.00332 * 4 2 1 31 31 H 1.08996 * 109.47059 * 60.00331 * 4 2 1 32 32 H 1.09001 * 109.47262 * 180.02562 * 4 2 1 33 33 H 1.09004 * 109.47242 * 299.99837 * 5 2 1 34 34 H 1.08993 * 109.47396 * 179.97438 * 5 2 1 35 35 H 1.09004 * 109.46815 * 59.99986 * 6 5 2 36 36 H 1.09001 * 109.47094 * 300.00192 * 6 5 2 37 37 H 1.09004 * 109.47325 * 60.00139 * 7 6 5 38 38 H 1.09004 * 109.46819 * 300.00502 * 7 6 5 39 39 H 0.96998 * 119.99525 * 359.97438 * 8 7 6 40 40 H 1.08005 * 120.06232 * 0.25042 * 12 11 9 41 41 H 1.09003 * 109.46643 * 60.00454 * 14 13 12 42 42 H 0.96701 * 114.00351 * 299.99224 * 15 14 13 43 43 H 1.07995 * 119.86281 * 180.02562 * 20 13 12 44 44 H 1.07999 * 120.08069 * 179.97438 * 23 21 20 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 14 1.8630 0.0000 0.0000 3 6 2.4840 1.7564 0.0000 4 6 2.4840 -0.8783 -1.5211 5 6 2.4840 -0.8782 1.5212 6 6 1.9738 -2.3208 1.5213 7 6 2.4833 -3.0418 2.7708 8 7 1.9954 -4.4232 2.7706 9 6 2.3201 -5.2528 3.7819 10 8 3.0183 -4.8550 4.6940 11 6 1.8282 -6.6470 3.7813 12 6 2.1622 -7.5084 4.8273 13 6 1.6997 -8.8083 4.8215 14 6 2.0602 -9.7396 5.9501 15 8 3.4808 -9.8778 6.0182 16 14 1.2882 -11.4081 5.6491 17 1 1.7938 -11.9638 4.3683 18 1 1.6430 -12.3256 6.7617 19 1 -0.1882 -11.2649 5.5780 20 6 0.9067 -9.2591 3.7817 21 6 0.5722 -8.4102 2.7401 22 35 -0.5120 -9.0369 1.3230 23 6 1.0294 -7.1079 2.7335 24 1 -0.3634 0.5139 0.8899 25 1 -0.3633 0.5139 -0.8901 26 1 -0.3634 -1.0276 0.0005 27 1 3.5740 1.7564 0.0005 28 1 2.1207 2.2702 -0.8900 29 1 2.1208 2.2703 0.8900 30 1 2.1206 -1.9059 -1.5211 31 1 2.1207 -0.3645 -2.4111 32 1 3.5740 -0.8787 -1.5209 33 1 2.1206 -0.3644 2.4112 34 1 3.5739 -0.8787 1.5210 35 1 2.3372 -2.8346 0.6312 36 1 0.8838 -2.3207 1.5212 37 1 2.1196 -2.5278 3.6606 38 1 3.5733 -3.0418 2.7713 39 1 1.4379 -4.7405 2.0429 40 1 2.7780 -7.1568 5.6420 41 1 1.6894 -9.3315 6.8904 42 1 3.8802 -10.2365 5.2139 43 1 0.5469 -10.2773 3.7821 44 1 0.7683 -6.4467 1.9205 RHF calculation, no. of doubly occupied orbitals= 56 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_9704008_12335870.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:06:52 Heat of formation + Delta-G solvation = -97.247434 kcal Electronic energy + Delta-G solvation = -22828.819154 eV Core-core repulsion = 19336.148793 eV Total energy + Delta-G solvation = -3492.670361 eV No. of doubly occupied orbitals = 56 Molecular weight (most abundant/longest-lived isotopes) = 373.062 amu Computer time = 0.32 seconds Orbital eigenvalues (eV) -41.52431 -39.97096 -37.74460 -36.84502 -34.05131 -33.64552 -32.70513 -30.50859 -29.60780 -28.48414 -28.48347 -27.48592 -26.96501 -24.68244 -22.89287 -22.56751 -21.29956 -19.18601 -18.08815 -17.67349 -17.30428 -16.86013 -16.48039 -16.38061 -15.79139 -15.57481 -15.19384 -15.00115 -14.79522 -14.33157 -14.30557 -14.24719 -14.05200 -13.98946 -13.51313 -13.47836 -13.35558 -13.19653 -13.16061 -13.14814 -13.02733 -12.66407 -12.36643 -12.20831 -12.00873 -11.90857 -11.82426 -11.51288 -11.14200 -10.87747 -10.85657 -10.67069 -10.55792 -10.33528 -10.10382 -9.94275 -0.52690 -0.20230 0.36377 0.99016 1.31848 1.38370 1.59481 1.69509 1.79876 1.80852 1.82337 2.06840 2.50402 2.57477 3.18980 3.30177 3.41200 3.73089 3.80396 3.93563 3.95190 3.99448 4.16804 4.20849 4.26368 4.48690 4.58793 4.61362 4.66064 4.68519 4.69833 4.70161 4.71443 4.71695 4.72735 4.89706 4.91959 5.05674 5.07400 5.23706 5.32974 5.39165 5.44662 5.49405 5.50022 6.36230 6.41727 7.10307 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.452 4.452 2 Si 1.012 2.988 3 C -0.453 4.453 4 C -0.451 4.451 5 C -0.412 4.412 6 C -0.122 4.122 7 C 0.118 3.882 8 N -0.727 5.727 9 C 0.559 3.441 10 O -0.527 6.527 11 C -0.127 4.127 12 C -0.015 4.015 13 C -0.119 4.119 14 C -0.079 4.079 15 O -0.533 6.533 16 Si 0.939 3.061 17 H -0.247 1.247 18 H -0.246 1.246 19 H -0.246 1.246 20 C -0.073 4.073 21 C -0.094 4.094 22 Br -0.034 7.034 23 C -0.054 4.054 24 H 0.068 0.932 25 H 0.068 0.932 26 H 0.067 0.933 27 H 0.068 0.932 28 H 0.068 0.932 29 H 0.068 0.932 30 H 0.067 0.933 31 H 0.068 0.932 32 H 0.068 0.932 33 H 0.079 0.921 34 H 0.079 0.921 35 H 0.072 0.928 36 H 0.071 0.929 37 H 0.071 0.929 38 H 0.071 0.929 39 H 0.400 0.600 40 H 0.151 0.849 41 H 0.126 0.874 42 H 0.378 0.622 43 H 0.136 0.864 44 H 0.139 0.861 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.842 0.108 -3.268 3.752 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.559 4.559 2 Si 1.208 2.792 3 C -0.560 4.560 4 C -0.559 4.559 5 C -0.497 4.497 6 C -0.160 4.160 7 C -0.005 4.005 8 N -0.379 5.379 9 C 0.346 3.654 10 O -0.404 6.404 11 C -0.131 4.131 12 C -0.034 4.034 13 C -0.121 4.121 14 C -0.190 4.190 15 O -0.338 6.338 16 Si 0.761 3.239 17 H -0.170 1.170 18 H -0.170 1.170 19 H -0.170 1.170 20 C -0.093 4.093 21 C -0.173 4.173 22 Br 0.051 6.949 23 C -0.075 4.075 24 H 0.087 0.913 25 H 0.087 0.913 26 H 0.087 0.913 27 H 0.087 0.913 28 H 0.087 0.913 29 H 0.087 0.913 30 H 0.087 0.913 31 H 0.087 0.913 32 H 0.087 0.913 33 H 0.098 0.902 34 H 0.098 0.902 35 H 0.090 0.910 36 H 0.090 0.910 37 H 0.089 0.911 38 H 0.089 0.911 39 H 0.235 0.765 40 H 0.169 0.831 41 H 0.143 0.857 42 H 0.225 0.775 43 H 0.153 0.847 44 H 0.156 0.844 Dipole moment (debyes) X Y Z Total from point charges -2.205 -0.387 -2.682 3.494 hybrid contribution 0.132 0.277 -0.632 0.702 sum -2.073 -0.110 -3.314 3.911 Atomic orbital electron populations 1.26172 1.20936 1.04330 1.04432 0.79158 0.66905 0.66749 0.66343 1.26145 1.06285 1.19125 1.04434 1.26170 1.06269 1.07974 1.15454 1.26142 1.06221 1.01162 1.16168 1.21439 1.01365 0.95845 0.97328 1.21573 0.99746 0.80015 0.99140 1.45983 1.53938 1.12905 1.25100 1.18098 0.80303 0.84833 0.82202 1.90828 1.37305 1.76723 1.35494 1.19999 1.01599 0.94675 0.96822 1.21303 0.94338 0.91077 0.96718 1.20364 0.99061 0.95842 0.96800 1.25009 0.87142 1.06995 0.99866 1.86559 1.17634 1.87424 1.42199 0.85819 0.80368 0.76073 0.81666 1.17008 1.16981 1.16954 1.21247 0.96205 0.99571 0.92254 1.21625 1.02941 0.96222 0.96516 1.96840 1.65952 1.88444 1.43621 1.21283 0.94665 0.94018 0.97516 0.91281 0.91311 0.91331 0.91266 0.91276 0.91268 0.91335 0.91311 0.91278 0.90200 0.90200 0.90987 0.90994 0.91110 0.91112 0.76485 0.83148 0.85669 0.77463 0.84671 0.84350 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.45 1.10 8.65 101.05 0.87 1.97 16 2 Si 1.01 -3.74 12.19 -169.99 -2.07 -5.82 16 3 C -0.45 0.88 8.65 101.05 0.87 1.75 16 4 C -0.45 1.10 8.65 101.05 0.87 1.97 16 5 C -0.41 1.24 4.45 37.16 0.17 1.41 16 6 C -0.12 0.36 4.70 -26.73 -0.13 0.24 16 7 C 0.12 -0.07 5.67 -4.04 -0.02 -0.10 16 8 N -0.73 0.44 5.51 -61.25 -0.34 0.11 16 9 C 0.56 1.24 7.77 -12.33 -0.10 1.15 16 10 O -0.53 -3.20 16.35 5.32 0.09 -3.11 16 11 C -0.13 -0.09 5.87 -104.97 -0.62 -0.71 16 12 C -0.02 -0.01 9.15 -39.18 -0.36 -0.37 16 13 C -0.12 0.04 5.38 -104.68 -0.56 -0.52 16 14 C -0.08 0.10 2.82 36.01 0.10 0.20 16 15 O -0.53 0.18 12.76 -35.23 -0.45 -0.27 16 16 Si 0.94 -1.29 25.06 -169.99 -4.26 -5.55 16 17 H -0.25 0.32 7.11 56.52 0.40 0.72 16 18 H -0.25 -0.03 7.11 56.52 0.40 0.37 16 19 H -0.25 0.23 7.11 56.52 0.40 0.63 16 20 C -0.07 0.03 8.41 -39.47 -0.33 -0.30 16 21 C -0.09 0.03 6.22 -39.57 -0.25 -0.22 16 22 Br -0.03 0.01 33.69 -68.01 -2.29 -2.28 16 23 C -0.05 0.05 9.28 -39.16 -0.36 -0.31 16 24 H 0.07 -0.15 7.96 -51.93 -0.41 -0.56 16 25 H 0.07 -0.14 7.96 -51.92 -0.41 -0.55 16 26 H 0.07 -0.18 7.79 -51.93 -0.40 -0.59 16 27 H 0.07 -0.12 7.96 -51.93 -0.41 -0.53 16 28 H 0.07 -0.11 7.96 -51.93 -0.41 -0.53 16 29 H 0.07 -0.12 7.96 -51.93 -0.41 -0.53 16 30 H 0.07 -0.18 7.79 -51.93 -0.40 -0.59 16 31 H 0.07 -0.14 7.96 -51.93 -0.41 -0.55 16 32 H 0.07 -0.15 7.96 -51.93 -0.41 -0.56 16 33 H 0.08 -0.23 7.96 -51.93 -0.41 -0.64 16 34 H 0.08 -0.23 7.96 -51.93 -0.41 -0.64 16 35 H 0.07 -0.27 7.79 -51.93 -0.40 -0.68 16 36 H 0.07 -0.27 7.79 -51.93 -0.40 -0.68 16 37 H 0.07 0.03 8.14 -51.93 -0.42 -0.39 16 38 H 0.07 0.03 8.14 -51.93 -0.42 -0.39 16 39 H 0.40 -1.33 6.51 -40.82 -0.27 -1.59 16 40 H 0.15 0.25 7.65 -52.48 -0.40 -0.15 16 41 H 0.13 -0.26 7.96 -51.93 -0.41 -0.67 16 42 H 0.38 -1.36 8.70 45.56 0.40 -0.96 16 43 H 0.14 -0.18 4.86 -52.49 -0.26 -0.43 16 44 H 0.14 -0.46 6.41 -52.49 -0.34 -0.79 16 LS Contribution 383.77 15.07 5.78 5.78 Total: 0.00 -6.63 383.77 -9.63 -16.27 By element: Atomic # 1 Polarization: -5.03 SS G_CDS: -6.26 Total: -11.28 kcal Atomic # 6 Polarization: 5.99 SS G_CDS: 0.17 Total: 6.15 kcal Atomic # 7 Polarization: 0.44 SS G_CDS: -0.34 Total: 0.11 kcal Atomic # 8 Polarization: -3.02 SS G_CDS: -0.36 Total: -3.38 kcal Atomic # 14 Polarization: -5.03 SS G_CDS: -6.33 Total: -11.36 kcal Atomic # 35 Polarization: 0.01 SS G_CDS: -2.29 Total: -2.28 kcal Total LS contribution 5.78 Total: 5.78 kcal Total: -6.63 -9.63 -16.27 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9704008_12335870.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -80.982 kcal (2) G-P(sol) polarization free energy of solvation -6.633 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -87.615 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.632 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -16.265 kcal (6) G-S(sol) free energy of system = (1) + (5) -97.247 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.32 seconds