Wall clock time and date at job start Tue Mar 9 2021 13:10:05 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46499 * 1 3 3 C 1.34664 * 124.84980 * 2 1 4 4 C 1.36774 * 108.39265 * 179.82889 * 3 2 1 5 5 C 1.47262 * 126.93802 * 180.15993 * 4 3 2 6 6 O 1.21636 * 119.99886 * 180.30570 * 5 4 3 7 7 N 1.34773 * 120.00078 * 0.30550 * 5 4 3 8 8 C 1.46506 * 119.99745 * 179.97438 * 7 5 4 9 9 C 1.53006 * 109.46973 * 179.97438 * 8 7 5 10 10 C 1.52995 * 109.47163 * 179.97438 * 9 8 7 11 11 Si 1.86296 * 109.47175 * 180.02562 * 10 9 8 12 12 C 1.86303 * 109.47218 * 60.00056 * 11 10 9 13 13 C 1.86306 * 109.47217 * 180.02562 * 11 10 9 14 14 C 1.86304 * 109.47086 * 299.99980 * 11 10 9 15 15 C 1.46686 * 106.11767 * 0.41460 * 4 3 2 16 16 C 1.34489 * 106.33410 * 359.74157 * 15 4 3 17 17 C 1.50698 * 125.57249 * 180.02562 * 16 15 4 18 18 O 1.42904 * 109.46790 * 150.00471 * 17 16 15 19 19 Si 1.86302 * 109.47183 * 30.00286 * 17 16 15 20 20 H 1.48505 * 109.47005 * 59.99865 * 19 17 16 21 21 H 1.48497 * 109.46912 * 179.97438 * 19 17 16 22 22 H 1.48498 * 109.46850 * 299.99844 * 19 17 16 23 23 H 1.09002 * 109.47391 * 269.69950 * 1 2 3 24 24 H 1.09001 * 109.46813 * 149.70006 * 1 2 3 25 25 H 1.09004 * 109.47041 * 29.70134 * 1 2 3 26 26 H 1.07992 * 125.80255 * 359.96383 * 3 2 1 27 27 H 0.96993 * 120.00223 * 0.02562 * 7 5 4 28 28 H 1.08994 * 109.47470 * 299.99917 * 8 7 5 29 29 H 1.09006 * 109.47376 * 60.00146 * 8 7 5 30 30 H 1.08994 * 109.47241 * 300.00409 * 9 8 7 31 31 H 1.09006 * 109.46663 * 60.00061 * 9 8 7 32 32 H 1.09002 * 109.47559 * 300.00750 * 10 9 8 33 33 H 1.09006 * 109.47158 * 60.00515 * 10 9 8 34 34 H 1.09002 * 109.46555 * 60.00164 * 12 11 10 35 35 H 1.08996 * 109.47055 * 180.02562 * 12 11 10 36 36 H 1.09001 * 109.46870 * 300.00173 * 12 11 10 37 37 H 1.08997 * 109.46925 * 59.99693 * 13 11 10 38 38 H 1.08997 * 109.47027 * 180.02562 * 13 11 10 39 39 H 1.08998 * 109.46512 * 299.99818 * 13 11 10 40 40 H 1.09004 * 109.46684 * 60.00150 * 14 11 10 41 41 H 1.08997 * 109.46928 * 179.97438 * 14 11 10 42 42 H 1.08997 * 109.47259 * 300.00432 * 14 11 10 43 43 H 1.08004 * 126.83389 * 179.72992 * 15 4 3 44 44 H 1.09003 * 109.46926 * 270.00119 * 17 16 15 45 45 H 0.96699 * 113.99971 * 299.99797 * 18 17 16 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.2345 1.1051 0.0000 4 6 3.5462 0.7177 0.0039 5 6 4.7284 1.5958 0.0086 6 8 5.8447 1.1128 0.0061 7 7 4.5733 2.9345 0.0156 8 6 5.7495 3.8081 0.0208 9 6 5.2987 5.2702 0.0277 10 6 6.5270 6.1825 0.0338 11 14 5.9782 7.9628 0.0430 12 6 4.9545 8.2893 1.5650 13 6 7.4738 9.0737 0.0496 14 6 4.9574 8.3058 -1.4773 15 6 3.5375 -0.7492 -0.0038 16 6 2.2447 -1.1198 -0.0058 17 6 1.7398 -2.5396 -0.0127 18 8 0.4807 -2.6006 0.6605 19 14 2.9648 -3.6386 0.8605 20 1 3.1304 -3.1790 2.2628 21 1 2.4668 -5.0376 0.8542 22 1 4.2731 -3.5752 0.1609 23 1 -0.3634 -0.0054 1.0276 24 1 -0.3633 -0.8873 -0.5185 25 1 -0.3633 0.8927 -0.5092 26 1 1.8767 2.1241 -0.0006 27 1 3.6832 3.3197 0.0179 28 1 6.3471 3.6076 0.9100 29 1 6.3480 3.6170 -0.8699 30 1 4.7013 5.4705 -0.8617 31 1 4.7000 5.4616 0.9182 32 1 7.1241 5.9821 0.9234 33 1 7.1261 5.9912 -0.8565 34 1 5.5519 8.0886 2.4544 35 1 4.6331 9.3307 1.5701 36 1 4.0795 7.6393 1.5606 37 1 8.0723 8.8825 -0.8411 38 1 7.1527 10.1152 0.0554 39 1 8.0713 8.8730 0.9389 40 1 4.0823 7.6558 -1.4816 41 1 4.6359 9.3472 -1.4717 42 1 5.5562 8.1147 -2.3678 43 1 4.3981 -1.4017 -0.0075 44 1 1.6182 -2.8770 -1.0420 45 1 0.5138 -2.3141 1.5834 RHF calculation, no. of doubly occupied orbitals= 54 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_9704008_13287730.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:10:05 Heat of formation + Delta-G solvation = -79.507841 kcal Electronic energy + Delta-G solvation = -21718.832345 eV Core-core repulsion = 18474.011843 eV Total energy + Delta-G solvation = -3244.820501 eV No. of doubly occupied orbitals = 54 Molecular weight (most abundant/longest-lived isotopes) = 298.163 amu Computer time = 0.31 seconds Orbital eigenvalues (eV) -42.44491 -40.02195 -37.83702 -36.55421 -33.89586 -33.39666 -31.36677 -29.57451 -28.45850 -28.45577 -28.00244 -26.81596 -25.86275 -23.35939 -22.47245 -20.90570 -20.39588 -19.04787 -17.55231 -16.91926 -16.80942 -16.64703 -16.57584 -15.73533 -15.66499 -15.14802 -14.89035 -14.79210 -14.45010 -14.24026 -14.09819 -14.07264 -13.93810 -13.55796 -13.50362 -13.39999 -13.32593 -13.24589 -13.12481 -13.08895 -13.03332 -12.56581 -12.39836 -12.00848 -11.91607 -11.81812 -10.89362 -10.82467 -10.80279 -10.79079 -10.47538 -9.92593 -9.54232 -9.19330 0.79137 0.97200 1.38966 1.50555 1.54631 1.75529 1.84058 1.85538 1.85784 2.02112 2.42551 2.62601 2.75781 3.18526 3.55664 3.77028 3.80010 4.05259 4.09101 4.15061 4.24912 4.32109 4.43470 4.49211 4.55093 4.66457 4.67050 4.71513 4.71772 4.72910 4.74257 4.74563 4.79697 4.88608 5.00886 5.09827 5.17893 5.34715 5.46520 5.51884 5.52634 5.60342 5.71717 5.97633 6.15709 6.31970 6.73413 7.53702 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.066 3.934 2 N -0.425 5.425 3 C 0.050 3.950 4 C -0.226 4.226 5 C 0.588 3.412 6 O -0.543 6.543 7 N -0.734 5.734 8 C 0.120 3.880 9 C -0.120 4.120 10 C -0.412 4.412 11 Si 1.012 2.988 12 C -0.451 4.451 13 C -0.452 4.452 14 C -0.451 4.451 15 C -0.141 4.141 16 C -0.021 4.021 17 C -0.056 4.056 18 O -0.543 6.543 19 Si 0.970 3.030 20 H -0.250 1.250 21 H -0.251 1.251 22 H -0.245 1.245 23 H 0.076 0.924 24 H 0.101 0.899 25 H 0.081 0.919 26 H 0.171 0.829 27 H 0.396 0.604 28 H 0.067 0.933 29 H 0.067 0.933 30 H 0.070 0.930 31 H 0.070 0.930 32 H 0.079 0.921 33 H 0.079 0.921 34 H 0.068 0.932 35 H 0.067 0.933 36 H 0.067 0.933 37 H 0.068 0.932 38 H 0.068 0.932 39 H 0.068 0.932 40 H 0.067 0.933 41 H 0.067 0.933 42 H 0.068 0.932 43 H 0.152 0.848 44 H 0.122 0.878 45 H 0.377 0.623 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -5.266 2.868 0.550 6.021 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.075 4.075 2 N -0.100 5.100 3 C -0.086 4.086 4 C -0.236 4.236 5 C 0.377 3.623 6 O -0.421 6.421 7 N -0.386 5.386 8 C -0.003 4.003 9 C -0.158 4.158 10 C -0.497 4.497 11 Si 1.208 2.792 12 C -0.558 4.558 13 C -0.560 4.560 14 C -0.558 4.558 15 C -0.165 4.165 16 C -0.130 4.130 17 C -0.166 4.166 18 O -0.348 6.348 19 Si 0.789 3.211 20 H -0.173 1.173 21 H -0.175 1.175 22 H -0.168 1.168 23 H 0.095 0.905 24 H 0.119 0.881 25 H 0.100 0.900 26 H 0.188 0.812 27 H 0.230 0.770 28 H 0.085 0.915 29 H 0.085 0.915 30 H 0.088 0.912 31 H 0.088 0.912 32 H 0.097 0.903 33 H 0.097 0.903 34 H 0.087 0.913 35 H 0.086 0.914 36 H 0.087 0.913 37 H 0.087 0.913 38 H 0.087 0.913 39 H 0.087 0.913 40 H 0.086 0.914 41 H 0.086 0.914 42 H 0.087 0.913 43 H 0.170 0.830 44 H 0.140 0.860 45 H 0.225 0.775 Dipole moment (debyes) X Y Z Total from point charges -4.415 1.722 0.391 4.755 hybrid contribution -0.611 0.932 0.200 1.133 sum -5.027 2.654 0.591 5.715 Atomic orbital electron populations 1.22271 0.76168 1.05139 1.03938 1.43468 1.07028 1.04883 1.54599 1.21915 0.90080 0.91773 1.04851 1.20328 0.91578 0.93928 1.17777 1.17409 0.88052 0.81338 0.75496 1.90789 1.25891 1.75247 1.50191 1.45880 1.09915 1.05908 1.76859 1.21469 0.87733 0.88558 1.02523 1.21415 0.98449 0.93326 1.02615 1.26141 1.01446 1.16852 1.05266 0.79170 0.66924 0.66154 0.66980 1.26166 1.09311 1.04831 1.15506 1.26145 1.15123 1.10260 1.04449 1.26167 1.09288 1.04881 1.15483 1.21754 0.95005 0.93408 1.06321 1.20809 0.90568 0.89215 1.12427 1.24764 0.93682 0.94597 1.03520 1.86483 1.29791 1.89626 1.28894 0.85419 0.77366 0.78129 0.80156 1.17290 1.17487 1.16842 0.90519 0.88075 0.90045 0.81196 0.77004 0.91509 0.91503 0.91154 0.91169 0.90267 0.90259 0.91282 0.91363 0.91349 0.91266 0.91317 0.91276 0.91352 0.91365 0.91278 0.83029 0.86016 0.77527 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.07 -0.23 9.81 59.85 0.59 0.36 16 2 N -0.43 0.26 3.09 -119.89 -0.37 -0.11 16 3 C 0.05 -0.02 10.83 -16.84 -0.18 -0.20 16 4 C -0.23 -0.62 6.29 -103.35 -0.65 -1.27 16 5 C 0.59 2.60 7.81 -12.59 -0.10 2.50 16 6 O -0.54 -4.75 16.97 5.25 0.09 -4.66 16 7 N -0.73 -0.58 5.55 -61.43 -0.34 -0.92 16 8 C 0.12 0.08 5.67 -4.04 -0.02 0.06 16 9 C -0.12 0.26 4.70 -26.73 -0.13 0.13 16 10 C -0.41 0.95 4.45 37.16 0.17 1.12 16 11 Si 1.01 -3.33 12.19 -169.99 -2.07 -5.40 16 12 C -0.45 0.97 8.65 101.05 0.87 1.84 16 13 C -0.45 0.72 8.65 101.05 0.87 1.59 16 14 C -0.45 0.96 8.65 101.05 0.87 1.83 16 15 C -0.14 -0.41 9.49 -37.50 -0.36 -0.77 16 16 C -0.02 -0.01 6.14 -81.86 -0.50 -0.52 16 17 C -0.06 0.06 2.87 36.00 0.10 0.16 16 18 O -0.54 0.90 10.32 -35.23 -0.36 0.54 16 19 Si 0.97 -0.47 26.56 -169.99 -4.51 -4.98 16 20 H -0.25 -0.12 7.11 56.52 0.40 0.28 16 21 H -0.25 -0.11 7.11 56.52 0.40 0.29 16 22 H -0.25 -0.17 6.81 56.52 0.38 0.22 16 23 H 0.08 -0.35 8.14 -51.93 -0.42 -0.77 16 24 H 0.10 -0.29 6.73 -51.93 -0.35 -0.64 16 25 H 0.08 -0.40 8.13 -51.93 -0.42 -0.82 16 26 H 0.17 -0.70 7.45 -52.49 -0.39 -1.09 16 27 H 0.40 -0.96 7.42 -40.82 -0.30 -1.27 16 28 H 0.07 0.13 8.14 -51.93 -0.42 -0.29 16 29 H 0.07 0.13 8.14 -51.93 -0.42 -0.29 16 30 H 0.07 -0.21 7.79 -51.93 -0.40 -0.62 16 31 H 0.07 -0.21 7.79 -51.93 -0.40 -0.62 16 32 H 0.08 -0.16 7.96 -51.93 -0.41 -0.58 16 33 H 0.08 -0.16 7.96 -51.93 -0.41 -0.58 16 34 H 0.07 -0.12 7.96 -51.93 -0.41 -0.54 16 35 H 0.07 -0.12 7.96 -51.93 -0.41 -0.54 16 36 H 0.07 -0.16 7.79 -51.93 -0.40 -0.57 16 37 H 0.07 -0.10 7.96 -51.93 -0.41 -0.51 16 38 H 0.07 -0.09 7.96 -51.93 -0.41 -0.51 16 39 H 0.07 -0.10 7.96 -51.93 -0.41 -0.51 16 40 H 0.07 -0.16 7.79 -51.93 -0.40 -0.57 16 41 H 0.07 -0.12 7.96 -51.93 -0.41 -0.53 16 42 H 0.07 -0.12 7.96 -51.93 -0.41 -0.54 16 43 H 0.15 0.48 6.69 -52.48 -0.35 0.12 16 44 H 0.12 -0.22 7.96 -51.93 -0.41 -0.64 16 45 H 0.38 -1.62 8.70 45.56 0.40 -1.22 16 LS Contribution 370.05 15.07 5.58 5.58 Total: 0.00 -8.72 370.05 -7.71 -16.43 By element: Atomic # 1 Polarization: -6.05 SS G_CDS: -7.25 Total: -13.31 kcal Atomic # 6 Polarization: 5.30 SS G_CDS: 1.54 Total: 6.84 kcal Atomic # 7 Polarization: -0.33 SS G_CDS: -0.71 Total: -1.04 kcal Atomic # 8 Polarization: -3.85 SS G_CDS: -0.27 Total: -4.12 kcal Atomic # 14 Polarization: -3.79 SS G_CDS: -6.59 Total: -10.38 kcal Total LS contribution 5.58 Total: 5.58 kcal Total: -8.72 -7.71 -16.43 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9704008_13287730.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -63.075 kcal (2) G-P(sol) polarization free energy of solvation -8.724 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -71.799 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.709 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -16.433 kcal (6) G-S(sol) free energy of system = (1) + (5) -79.508 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.31 seconds