Wall clock time and date at job start Tue Mar 9 2021 13:13:30 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 Si 1.86299 * 1 3 3 C 1.86300 * 109.47459 * 2 1 4 4 C 1.86300 * 109.46878 * 239.99917 * 2 1 3 5 5 C 1.86301 * 109.47106 * 120.00216 * 2 1 3 6 6 C 1.53000 * 109.46997 * 60.00000 * 5 2 1 7 7 C 1.53005 * 109.46632 * 180.02562 * 6 5 2 8 8 N 1.46505 * 109.46784 * 179.97438 * 7 6 5 9 9 C 1.34777 * 120.00115 * 179.97438 * 8 7 6 10 10 O 1.21288 * 119.99593 * 0.02562 * 9 8 7 11 11 C 1.50697 * 120.00369 * 180.02562 * 9 8 7 12 12 C 1.52997 * 109.47466 * 180.02562 * 11 9 8 13 13 O 1.42898 * 109.47319 * 180.02562 * 12 11 9 14 14 C 1.35900 * 117.00172 * 179.97438 * 13 12 11 15 15 C 1.38710 * 120.05544 * 359.72769 * 14 13 12 16 16 C 1.38159 * 119.94311 * 179.72143 * 15 14 13 17 17 C 1.38250 * 120.05742 * 0.57011 * 16 15 14 18 18 C 1.38280 * 120.10833 * 359.68104 * 17 16 15 19 19 C 1.50697 * 119.97205 * 180.02562 * 18 17 16 20 20 O 1.42902 * 109.47393 * 245.02079 * 19 18 17 21 21 Si 1.86306 * 109.47148 * 5.02162 * 19 18 17 22 22 H 1.48495 * 109.47180 * 179.97438 * 21 19 18 23 23 H 1.48491 * 109.46932 * 300.00295 * 21 19 18 24 24 H 1.48504 * 109.46673 * 59.99962 * 21 19 18 25 25 C 1.38129 * 120.05716 * 0.04353 * 18 17 16 26 26 H 1.09002 * 109.46890 * 299.99904 * 1 2 3 27 27 H 1.09000 * 109.47207 * 59.99758 * 1 2 3 28 28 H 1.09004 * 109.47212 * 179.97438 * 1 2 3 29 29 H 1.08992 * 109.46912 * 180.02562 * 3 2 1 30 30 H 1.09000 * 109.47108 * 300.00303 * 3 2 1 31 31 H 1.09002 * 109.46724 * 59.99677 * 3 2 1 32 32 H 1.09000 * 109.47413 * 299.99608 * 4 2 1 33 33 H 1.08996 * 109.47015 * 60.00644 * 4 2 1 34 34 H 1.09001 * 109.47083 * 179.97438 * 4 2 1 35 35 H 1.09002 * 109.47148 * 299.99722 * 5 2 1 36 36 H 1.09001 * 109.47357 * 179.97438 * 5 2 1 37 37 H 1.08992 * 109.47399 * 59.99867 * 6 5 2 38 38 H 1.09001 * 109.47194 * 299.99695 * 6 5 2 39 39 H 1.09002 * 109.47193 * 60.00246 * 7 6 5 40 40 H 1.08992 * 109.47333 * 299.99245 * 7 6 5 41 41 H 0.97003 * 120.00244 * 359.97438 * 8 7 6 42 42 H 1.09002 * 109.47120 * 59.99760 * 11 9 8 43 43 H 1.08998 * 109.46862 * 300.00562 * 11 9 8 44 44 H 1.09002 * 109.47153 * 59.99773 * 12 11 9 45 45 H 1.09001 * 109.46832 * 299.99964 * 12 11 9 46 46 H 1.08006 * 120.02494 * 359.97438 * 15 14 13 47 47 H 1.08006 * 119.97038 * 180.27439 * 16 15 14 48 48 H 1.08000 * 119.94133 * 179.70045 * 17 16 15 49 49 H 1.09005 * 109.47122 * 125.02014 * 19 18 17 50 50 H 0.96703 * 113.99614 * 179.97438 * 20 19 18 51 51 H 1.07998 * 120.02418 * 180.02562 * 25 18 17 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 14 1.8630 0.0000 0.0000 3 6 2.4841 1.7564 0.0000 4 6 2.4839 -0.8783 -1.5211 5 6 2.4840 -0.8783 1.5211 6 6 1.9740 -2.3208 1.5210 7 6 2.4835 -3.0418 2.7706 8 7 1.9947 -4.4229 2.7709 9 6 2.3201 -5.2528 3.7817 10 8 3.0174 -4.8561 4.6914 11 6 1.8178 -6.6736 3.7818 12 6 2.3272 -7.3947 5.0313 13 8 1.8513 -8.7421 5.0310 14 6 2.2164 -9.5256 6.0797 15 6 3.0208 -9.0100 7.0852 16 6 3.3859 -9.8069 8.1531 17 6 2.9599 -11.1207 8.2142 18 6 2.1622 -11.6387 7.2104 19 6 1.6992 -13.0710 7.2803 20 8 2.2719 -13.8102 6.1997 21 14 2.2379 -13.8195 8.8991 22 1 1.7811 -15.2308 8.9683 23 1 3.7188 -13.7726 8.9975 24 1 1.6425 -13.0514 10.0220 25 6 1.7898 -10.8444 6.1434 26 1 -0.3633 0.5138 0.8900 27 1 -0.3633 0.5139 -0.8900 28 1 -0.3634 -1.0277 -0.0005 29 1 3.5740 1.7563 -0.0005 30 1 2.1207 2.2703 -0.8900 31 1 2.1207 2.2702 0.8900 32 1 2.1206 -1.9059 -1.5211 33 1 2.1207 -0.3644 -2.4111 34 1 3.5739 -0.8779 -1.5214 35 1 2.1207 -0.3645 2.4111 36 1 3.5740 -0.8787 1.5209 37 1 2.3372 -2.8346 0.6311 38 1 0.8840 -2.3208 1.5211 39 1 2.1198 -2.5279 3.6604 40 1 3.5734 -3.0419 2.7710 41 1 1.4367 -4.7401 2.0435 42 1 2.1812 -7.1875 2.8918 43 1 0.7278 -6.6735 3.7816 44 1 1.9634 -6.8807 5.9211 45 1 3.4172 -7.3947 5.0318 46 1 3.3581 -7.9852 7.0354 47 1 4.0085 -9.4045 8.9386 48 1 3.2504 -11.7434 9.0474 49 1 0.6121 -13.1054 7.2081 50 1 2.0167 -14.7427 6.1823 51 1 1.1665 -11.2493 5.3600 RHF calculation, no. of doubly occupied orbitals= 62 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_9704008_4549614.mol2 51 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:13:30 Heat of formation + Delta-G solvation = -142.429702 kcal Electronic energy + Delta-G solvation = -25735.340224 eV Core-core repulsion = 21950.771185 eV Total energy + Delta-G solvation = -3784.569038 eV No. of doubly occupied orbitals = 62 Molecular weight (most abundant/longest-lived isotopes) = 339.182 amu Computer time = 0.47 seconds Orbital eigenvalues (eV) -41.27637 -40.65621 -38.96631 -37.29882 -36.83445 -33.86675 -32.98971 -32.49188 -30.75862 -29.60614 -28.49137 -28.49010 -27.43496 -26.73731 -24.77762 -23.56785 -22.61383 -21.87473 -21.19422 -19.07294 -18.46888 -17.81980 -17.49011 -17.33619 -17.17332 -16.72936 -16.67498 -15.78500 -15.67173 -15.58178 -14.90747 -14.73454 -14.41806 -14.32590 -14.29491 -14.23343 -14.17656 -13.97974 -13.95959 -13.50696 -13.46342 -13.35916 -13.20269 -13.17697 -13.15678 -12.87761 -12.87009 -12.67335 -12.32406 -12.04962 -11.92085 -11.84370 -11.74318 -11.57475 -11.06258 -10.87681 -10.86422 -10.58078 -10.36845 -10.13555 -9.79115 -9.12919 0.32164 0.52172 1.14576 1.45718 1.52371 1.57344 1.65516 1.78163 1.81535 1.83825 1.93031 2.51328 2.59534 2.74667 3.43653 3.55705 3.80626 3.86249 3.92384 3.94898 3.95148 4.05956 4.13652 4.19609 4.27691 4.33149 4.36586 4.52121 4.57146 4.61105 4.64115 4.65572 4.67300 4.68083 4.69480 4.70783 4.70933 4.72174 4.78451 4.92187 5.07078 5.08132 5.25100 5.36311 5.37001 5.43999 5.48434 5.48651 5.49284 5.56506 5.77944 6.37868 6.47397 6.58818 7.13605 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.451 4.451 2 Si 1.011 2.989 3 C -0.452 4.452 4 C -0.451 4.451 5 C -0.412 4.412 6 C -0.121 4.121 7 C 0.118 3.882 8 N -0.730 5.730 9 C 0.518 3.482 10 O -0.539 6.539 11 C -0.142 4.142 12 C 0.074 3.926 13 O -0.316 6.316 14 C 0.132 3.868 15 C -0.203 4.203 16 C -0.072 4.072 17 C -0.161 4.161 18 C -0.038 4.038 19 C -0.083 4.083 20 O -0.543 6.543 21 Si 0.950 3.050 22 H -0.257 1.257 23 H -0.247 1.247 24 H -0.249 1.249 25 C -0.121 4.121 26 H 0.068 0.932 27 H 0.068 0.932 28 H 0.068 0.932 29 H 0.068 0.932 30 H 0.068 0.932 31 H 0.068 0.932 32 H 0.068 0.932 33 H 0.068 0.932 34 H 0.068 0.932 35 H 0.079 0.921 36 H 0.079 0.921 37 H 0.071 0.929 38 H 0.071 0.929 39 H 0.068 0.932 40 H 0.068 0.932 41 H 0.403 0.597 42 H 0.107 0.893 43 H 0.107 0.893 44 H 0.073 0.927 45 H 0.072 0.928 46 H 0.133 0.867 47 H 0.130 0.870 48 H 0.122 0.878 49 H 0.078 0.922 50 H 0.380 0.620 51 H 0.134 0.866 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.824 0.546 -2.668 3.923 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.558 4.558 2 Si 1.208 2.792 3 C -0.560 4.560 4 C -0.559 4.559 5 C -0.497 4.497 6 C -0.159 4.159 7 C -0.006 4.006 8 N -0.383 5.383 9 C 0.304 3.696 10 O -0.416 6.416 11 C -0.182 4.182 12 C -0.001 4.001 13 O -0.230 6.230 14 C 0.087 3.913 15 C -0.221 4.221 16 C -0.090 4.090 17 C -0.179 4.179 18 C -0.039 4.039 19 C -0.193 4.193 20 O -0.349 6.349 21 Si 0.773 3.227 22 H -0.182 1.182 23 H -0.171 1.171 24 H -0.173 1.173 25 C -0.140 4.140 26 H 0.087 0.913 27 H 0.087 0.913 28 H 0.087 0.913 29 H 0.087 0.913 30 H 0.087 0.913 31 H 0.087 0.913 32 H 0.087 0.913 33 H 0.087 0.913 34 H 0.087 0.913 35 H 0.097 0.903 36 H 0.097 0.903 37 H 0.090 0.910 38 H 0.090 0.910 39 H 0.086 0.914 40 H 0.087 0.913 41 H 0.237 0.763 42 H 0.126 0.874 43 H 0.125 0.875 44 H 0.091 0.909 45 H 0.091 0.909 46 H 0.151 0.849 47 H 0.148 0.852 48 H 0.140 0.860 49 H 0.096 0.904 50 H 0.228 0.772 51 H 0.152 0.848 Dipole moment (debyes) X Y Z Total from point charges -1.897 1.028 -1.507 2.631 hybrid contribution -0.508 -0.236 -0.571 0.800 sum -2.405 0.792 -2.078 3.275 Atomic orbital electron populations 1.26169 1.20912 1.04334 1.04434 0.79172 0.66937 0.66772 0.66367 1.26143 1.06283 1.19110 1.04441 1.26168 1.06265 1.07977 1.15444 1.26144 1.06185 1.01264 1.16136 1.21426 1.01332 0.95773 0.97362 1.21540 0.99608 0.80416 0.98993 1.46029 1.54060 1.12804 1.25382 1.20305 0.80198 0.87166 0.81895 1.90755 1.37716 1.77468 1.35696 1.21470 1.03951 0.92487 1.00245 1.22413 0.99681 0.79810 0.98226 1.85967 1.71195 1.23277 1.42560 1.18923 0.94525 0.90776 0.87078 1.21379 1.02949 1.01579 0.96222 1.20878 0.97855 0.93079 0.97220 1.20911 1.00622 0.96622 0.99758 1.19008 0.96970 0.93448 0.94430 1.24770 1.00497 0.92414 1.01632 1.86523 1.73494 1.25513 1.49381 0.85687 0.81680 0.79592 0.75749 1.18159 1.17091 1.17274 1.20202 1.03640 0.90657 0.99516 0.91284 0.91301 0.91325 0.91266 0.91264 0.91267 0.91322 0.91301 0.91284 0.90256 0.90254 0.91006 0.91019 0.91352 0.91342 0.76277 0.87449 0.87473 0.90921 0.90929 0.84927 0.85169 0.86050 0.90390 0.77220 0.84785 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.45 1.10 8.65 101.05 0.87 1.98 16 2 Si 1.01 -3.70 12.19 -169.99 -2.07 -5.78 16 3 C -0.45 0.87 8.65 101.05 0.87 1.75 16 4 C -0.45 1.09 8.65 101.05 0.87 1.97 16 5 C -0.41 1.22 4.45 37.16 0.17 1.39 16 6 C -0.12 0.37 4.70 -26.73 -0.13 0.24 16 7 C 0.12 -0.09 5.67 -4.04 -0.02 -0.11 16 8 N -0.73 0.98 5.56 -60.29 -0.33 0.64 16 9 C 0.52 0.53 7.83 -10.99 -0.09 0.44 16 10 O -0.54 -2.81 15.98 5.55 0.09 -2.72 16 11 C -0.14 0.16 6.07 -27.89 -0.17 -0.01 16 12 C 0.07 0.08 4.03 37.16 0.15 0.23 16 13 O -0.32 -0.84 10.14 -19.43 -0.20 -1.03 16 14 C 0.13 0.43 6.69 -39.22 -0.26 0.17 16 15 C -0.20 -0.50 9.04 -39.44 -0.36 -0.86 16 16 C -0.07 -0.14 10.04 -39.61 -0.40 -0.54 16 17 C -0.16 -0.37 8.67 -39.56 -0.34 -0.71 16 18 C -0.04 -0.10 5.38 -104.65 -0.56 -0.66 16 19 C -0.08 -0.03 2.79 36.00 0.10 0.07 16 20 O -0.54 -0.46 12.81 -35.23 -0.45 -0.91 16 21 Si 0.95 -0.12 25.14 -169.99 -4.27 -4.40 16 22 H -0.26 0.05 7.11 56.52 0.40 0.45 16 23 H -0.25 -0.32 7.04 56.52 0.40 0.08 16 24 H -0.25 -0.11 7.11 56.52 0.40 0.29 16 25 C -0.12 -0.38 9.62 -39.43 -0.38 -0.76 16 26 H 0.07 -0.15 7.96 -51.93 -0.41 -0.56 16 27 H 0.07 -0.14 7.96 -51.93 -0.41 -0.55 16 28 H 0.07 -0.18 7.79 -51.93 -0.40 -0.59 16 29 H 0.07 -0.12 7.96 -51.93 -0.41 -0.53 16 30 H 0.07 -0.11 7.96 -51.93 -0.41 -0.53 16 31 H 0.07 -0.12 7.96 -51.93 -0.41 -0.53 16 32 H 0.07 -0.18 7.79 -51.93 -0.40 -0.59 16 33 H 0.07 -0.14 7.96 -51.93 -0.41 -0.55 16 34 H 0.07 -0.15 7.96 -51.93 -0.41 -0.56 16 35 H 0.08 -0.22 7.96 -51.93 -0.41 -0.63 16 36 H 0.08 -0.22 7.96 -51.93 -0.41 -0.63 16 37 H 0.07 -0.27 7.79 -51.93 -0.40 -0.68 16 38 H 0.07 -0.27 7.79 -51.93 -0.40 -0.68 16 39 H 0.07 0.03 8.14 -51.93 -0.42 -0.39 16 40 H 0.07 0.03 8.14 -51.93 -0.42 -0.39 16 41 H 0.40 -1.71 8.47 -40.82 -0.35 -2.06 16 42 H 0.11 -0.28 8.14 -51.93 -0.42 -0.70 16 43 H 0.11 -0.29 8.14 -51.93 -0.42 -0.71 16 44 H 0.07 0.10 7.63 -51.93 -0.40 -0.30 16 45 H 0.07 0.11 7.61 -51.93 -0.39 -0.28 16 46 H 0.13 0.18 6.30 -52.48 -0.33 -0.15 16 47 H 0.13 -0.04 8.06 -52.48 -0.42 -0.46 16 48 H 0.12 0.10 4.86 -52.49 -0.26 -0.15 16 49 H 0.08 -0.12 7.96 -51.93 -0.41 -0.53 16 50 H 0.38 -1.43 8.74 45.56 0.40 -1.03 16 51 H 0.13 0.31 8.06 -52.49 -0.42 -0.11 16 LS Contribution 417.10 15.07 6.29 6.29 Total: 0.00 -8.35 417.10 -9.04 -17.39 By element: Atomic # 1 Polarization: -5.65 SS G_CDS: -8.41 Total: -14.07 kcal Atomic # 6 Polarization: 4.25 SS G_CDS: 0.33 Total: 4.58 kcal Atomic # 7 Polarization: 0.98 SS G_CDS: -0.33 Total: 0.64 kcal Atomic # 8 Polarization: -4.10 SS G_CDS: -0.56 Total: -4.66 kcal Atomic # 14 Polarization: -3.83 SS G_CDS: -6.35 Total: -10.17 kcal Total LS contribution 6.29 Total: 6.29 kcal Total: -8.35 -9.04 -17.39 kcal The number of atoms in the molecule is 51 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9704008_4549614.mol2 51 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -125.040 kcal (2) G-P(sol) polarization free energy of solvation -8.354 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -133.394 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.036 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.390 kcal (6) G-S(sol) free energy of system = (1) + (5) -142.430 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.47 seconds