Wall clock time and date at job start Tue Mar 9 2021 13:18:40 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 Si 1.86304 * 1 3 3 C 1.86306 * 109.47114 * 2 1 4 4 C 1.86296 * 109.47186 * 239.99904 * 2 1 3 5 5 C 1.86294 * 109.47062 * 119.99825 * 2 1 3 6 6 C 1.52998 * 109.47138 * 59.99856 * 5 2 1 7 7 C 1.53005 * 109.47204 * 179.97438 * 6 5 2 8 8 N 1.46501 * 109.46985 * 180.02562 * 7 6 5 9 9 C 1.34774 * 120.00005 * 179.97438 * 8 7 6 10 10 O 1.21287 * 119.99778 * 0.02562 * 9 8 7 11 11 C 1.50704 * 120.00211 * 180.02562 * 9 8 7 12 12 O 1.42900 * 109.46992 * 180.02562 * 11 9 8 13 13 C 1.35914 * 116.99871 * 180.02562 * 12 11 9 14 14 C 1.38678 * 120.06015 * 359.97438 * 13 12 11 15 15 C 1.38181 * 119.95680 * 179.97438 * 14 13 12 16 16 C 1.38241 * 120.07059 * 0.03195 * 15 14 13 17 17 C 1.50706 * 119.93825 * 179.97438 * 16 15 14 18 18 O 1.42895 * 109.46938 * 299.99525 * 17 16 15 19 19 Si 1.86299 * 109.46748 * 179.97438 * 17 16 15 20 20 H 1.48505 * 109.47505 * 299.99883 * 19 17 16 21 21 H 1.48503 * 109.47188 * 60.00070 * 19 17 16 22 22 H 1.48506 * 109.47139 * 179.97438 * 19 17 16 23 23 C 1.38279 * 120.12009 * 0.24319 * 16 15 14 24 24 C 1.38197 * 120.04539 * 359.46139 * 23 16 15 25 25 Br 1.89099 * 120.04178 * 180.25362 * 24 23 16 26 26 H 1.09002 * 109.46835 * 300.00378 * 1 2 3 27 27 H 1.09002 * 109.46983 * 60.00090 * 1 2 3 28 28 H 1.08999 * 109.47255 * 179.97438 * 1 2 3 29 29 H 1.09001 * 109.46984 * 180.02562 * 3 2 1 30 30 H 1.08998 * 109.46657 * 299.99827 * 3 2 1 31 31 H 1.08994 * 109.47088 * 59.99665 * 3 2 1 32 32 H 1.08999 * 109.47191 * 300.00244 * 4 2 1 33 33 H 1.09002 * 109.47155 * 60.00111 * 4 2 1 34 34 H 1.08993 * 109.47344 * 179.97438 * 4 2 1 35 35 H 1.08999 * 109.47438 * 300.00045 * 5 2 1 36 36 H 1.08998 * 109.47276 * 180.02562 * 5 2 1 37 37 H 1.09002 * 109.47305 * 59.99868 * 6 5 2 38 38 H 1.08998 * 109.47270 * 300.00289 * 6 5 2 39 39 H 1.08994 * 109.46953 * 60.00429 * 7 6 5 40 40 H 1.09001 * 109.46746 * 299.99832 * 7 6 5 41 41 H 0.97000 * 120.00017 * 0.02562 * 8 7 6 42 42 H 1.08994 * 109.46996 * 60.00301 * 11 9 8 43 43 H 1.09001 * 109.46965 * 299.99543 * 11 9 8 44 44 H 1.07999 * 120.02210 * 359.96235 * 14 13 12 45 45 H 1.07999 * 119.96701 * 180.02562 * 15 14 13 46 46 H 1.09000 * 109.47161 * 59.99791 * 17 16 15 47 47 H 0.96709 * 113.99981 * 180.02562 * 18 17 16 48 48 H 1.07998 * 119.98018 * 179.72434 * 23 16 15 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 14 1.8630 0.0000 0.0000 3 6 2.4841 1.7565 0.0000 4 6 2.4841 -0.8782 -1.5211 5 6 2.4840 -0.8782 1.5211 6 6 1.9740 -2.3206 1.5212 7 6 2.4845 -3.0421 2.7702 8 7 1.9966 -4.4234 2.7699 9 6 2.3231 -5.2536 3.7801 10 8 3.0205 -4.8569 4.6897 11 6 1.8217 -6.6748 3.7795 12 8 2.2984 -7.3485 4.9461 13 6 1.9346 -8.6490 5.0996 14 6 1.1350 -9.2636 4.1476 15 6 0.7668 -10.5861 4.3055 16 6 1.1940 -11.2968 5.4116 17 6 0.7901 -12.7388 5.5811 18 8 -0.6347 -12.8305 5.6401 19 14 1.5219 -13.4072 7.1586 20 1 3.0026 -13.3118 7.0969 21 1 1.0224 -12.6145 8.3108 22 1 1.1234 -14.8280 7.3260 23 6 1.9866 -10.6853 6.3656 24 6 2.3629 -9.3647 6.2095 25 35 3.4527 -8.5308 7.5105 26 1 -0.3633 0.5139 0.8900 27 1 -0.3633 0.5138 -0.8900 28 1 -0.3634 -1.0276 -0.0005 29 1 3.5741 1.7565 -0.0005 30 1 2.1207 2.2703 -0.8900 31 1 2.1207 2.2703 0.8899 32 1 2.1207 -1.9059 -1.5211 33 1 2.1207 -0.3644 -2.4111 34 1 3.5740 -0.8778 -1.5213 35 1 2.1207 -0.3643 2.4111 36 1 3.5740 -0.8778 1.5214 37 1 2.3373 -2.8345 0.6312 38 1 0.8840 -2.3206 1.5211 39 1 2.1215 -2.5284 3.6603 40 1 3.5745 -3.0421 2.7696 41 1 1.4392 -4.7408 2.0422 42 1 2.1851 -7.1879 2.8892 43 1 0.7317 -6.6755 3.7800 44 1 0.8002 -8.7090 3.2835 45 1 0.1445 -11.0650 3.5641 46 1 1.1571 -13.3207 4.7356 47 1 -0.9666 -13.7323 5.7492 48 1 2.3154 -11.2414 7.2311 RHF calculation, no. of doubly occupied orbitals= 62 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_9704008_6201210.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:18:40 Heat of formation + Delta-G solvation = -125.571003 kcal Electronic energy + Delta-G solvation = -26264.808825 eV Core-core repulsion = 22296.690451 eV Total energy + Delta-G solvation = -3968.118374 eV No. of doubly occupied orbitals = 62 Molecular weight (most abundant/longest-lived isotopes) = 403.077 amu Computer time = 0.55 seconds Orbital eigenvalues (eV) -41.63897 -40.55590 -39.06219 -37.38217 -36.74477 -33.77648 -33.42201 -32.26253 -30.53406 -29.83889 -29.46894 -28.49922 -28.49092 -26.81128 -26.10139 -23.98366 -22.64389 -22.27220 -21.49196 -19.56793 -18.66923 -18.34062 -17.60993 -17.18658 -17.01935 -16.68672 -16.60466 -16.25717 -15.56234 -15.34586 -15.07810 -14.69899 -14.53295 -14.34831 -14.26557 -14.23066 -14.04646 -14.00169 -13.92464 -13.74769 -13.46792 -13.46736 -13.19705 -13.18572 -13.16077 -12.68566 -12.51252 -12.33022 -12.21320 -12.06225 -11.92520 -11.83087 -11.70389 -11.02256 -10.98910 -10.87341 -10.87028 -10.58146 -10.44121 -10.16849 -9.95483 -9.24712 -0.00862 0.09022 0.74709 1.07703 1.35476 1.39133 1.45625 1.51757 1.72703 1.80003 1.81090 1.86830 2.37659 2.47853 2.57712 3.25892 3.42699 3.61085 3.72218 3.73005 3.83866 3.90289 3.94569 4.00721 4.03810 4.17488 4.26584 4.33043 4.57742 4.58662 4.60120 4.64533 4.67338 4.68831 4.70621 4.70724 4.71252 4.78443 4.90901 5.01125 5.06111 5.22858 5.28876 5.33295 5.41374 5.43693 5.47850 5.49079 6.02433 6.35037 6.49166 7.11518 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.451 4.451 2 Si 1.012 2.988 3 C -0.453 4.453 4 C -0.451 4.451 5 C -0.412 4.412 6 C -0.121 4.121 7 C 0.120 3.880 8 N -0.729 5.729 9 C 0.513 3.487 10 O -0.508 6.508 11 C 0.037 3.963 12 O -0.274 6.274 13 C 0.161 3.839 14 C -0.204 4.204 15 C -0.031 4.031 16 C -0.107 4.107 17 C -0.074 4.074 18 O -0.545 6.545 19 Si 0.930 3.070 20 H -0.245 1.245 21 H -0.243 1.243 22 H -0.252 1.252 23 C -0.056 4.056 24 C -0.118 4.118 25 Br -0.025 7.025 26 H 0.068 0.932 27 H 0.068 0.932 28 H 0.067 0.933 29 H 0.068 0.932 30 H 0.068 0.932 31 H 0.068 0.932 32 H 0.067 0.933 33 H 0.068 0.932 34 H 0.068 0.932 35 H 0.079 0.921 36 H 0.079 0.921 37 H 0.071 0.929 38 H 0.072 0.928 39 H 0.070 0.930 40 H 0.070 0.930 41 H 0.402 0.598 42 H 0.097 0.903 43 H 0.097 0.903 44 H 0.140 0.860 45 H 0.138 0.862 46 H 0.080 0.920 47 H 0.382 0.618 48 H 0.136 0.864 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.341 -1.806 -6.643 7.652 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.559 4.559 2 Si 1.208 2.792 3 C -0.560 4.560 4 C -0.559 4.559 5 C -0.498 4.498 6 C -0.158 4.158 7 C -0.003 4.003 8 N -0.384 5.384 9 C 0.297 3.703 10 O -0.381 6.381 11 C -0.042 4.042 12 O -0.185 6.185 13 C 0.112 3.888 14 C -0.224 4.224 15 C -0.049 4.049 16 C -0.108 4.108 17 C -0.184 4.184 18 O -0.351 6.351 19 Si 0.752 3.248 20 H -0.169 1.169 21 H -0.166 1.166 22 H -0.176 1.176 23 C -0.076 4.076 24 C -0.198 4.198 25 Br 0.061 6.939 26 H 0.087 0.913 27 H 0.087 0.913 28 H 0.087 0.913 29 H 0.087 0.913 30 H 0.087 0.913 31 H 0.087 0.913 32 H 0.087 0.913 33 H 0.087 0.913 34 H 0.087 0.913 35 H 0.098 0.902 36 H 0.098 0.902 37 H 0.090 0.910 38 H 0.090 0.910 39 H 0.088 0.912 40 H 0.088 0.912 41 H 0.236 0.764 42 H 0.115 0.885 43 H 0.115 0.885 44 H 0.158 0.842 45 H 0.156 0.844 46 H 0.098 0.902 47 H 0.230 0.770 48 H 0.154 0.846 Dipole moment (debyes) X Y Z Total from point charges -1.857 -0.737 -4.615 5.029 hybrid contribution -0.890 -0.778 -1.204 1.687 sum -2.746 -1.514 -5.819 6.610 Atomic orbital electron populations 1.26171 1.20920 1.04318 1.04448 0.79162 0.66912 0.66783 0.66327 1.26146 1.06294 1.19116 1.04447 1.26169 1.06279 1.07953 1.15453 1.26147 1.06242 1.01201 1.16185 1.21428 1.01344 0.95793 0.97283 1.21555 0.99718 0.79863 0.99137 1.45872 1.54565 1.12788 1.25176 1.19959 0.81173 0.86498 0.82626 1.90812 1.35913 1.76510 1.34861 1.22562 1.00676 0.91844 0.89087 1.86280 1.69743 1.20631 1.41872 1.18613 0.93361 0.83579 0.93211 1.21275 1.03449 0.96985 1.00673 1.20905 0.95106 0.92636 0.96280 1.19138 1.00602 0.95244 0.95862 1.24575 0.86680 0.96608 1.10557 1.86494 1.18402 1.33438 1.96741 0.85959 0.80740 0.80255 0.77835 1.16887 1.16619 1.17562 1.20801 0.96342 0.92219 0.98203 1.20912 1.06709 0.95390 0.96785 1.96800 1.65237 1.80578 1.51294 0.91266 0.91306 0.91340 0.91259 0.91271 0.91254 0.91339 0.91305 0.91272 0.90202 0.90204 0.90988 0.90975 0.91183 0.91193 0.76411 0.88487 0.88485 0.84205 0.84375 0.90206 0.77044 0.84646 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.45 1.18 8.65 101.05 0.87 2.05 16 2 Si 1.01 -3.87 12.19 -169.99 -2.07 -5.94 16 3 C -0.45 0.90 8.65 101.05 0.87 1.78 16 4 C -0.45 1.19 8.65 101.05 0.87 2.07 16 5 C -0.41 1.28 4.45 37.16 0.17 1.44 16 6 C -0.12 0.40 4.70 -26.73 -0.13 0.27 16 7 C 0.12 -0.10 5.67 -4.04 -0.02 -0.13 16 8 N -0.73 1.15 5.56 -60.29 -0.33 0.81 16 9 C 0.51 0.87 7.91 -10.98 -0.09 0.78 16 10 O -0.51 -3.54 16.50 -14.36 -0.24 -3.78 16 11 C 0.04 -0.03 5.22 36.01 0.19 0.16 16 12 O -0.27 -0.89 9.01 -39.38 -0.35 -1.24 16 13 C 0.16 0.39 6.68 -39.20 -0.26 0.13 16 14 C -0.20 0.04 9.04 -39.44 -0.36 -0.32 16 15 C -0.03 0.00 9.60 -39.60 -0.38 -0.38 16 16 C -0.11 -0.10 5.42 -104.60 -0.57 -0.67 16 17 C -0.07 0.07 2.81 36.01 0.10 0.17 16 18 O -0.54 0.39 12.74 -35.23 -0.45 -0.06 16 19 Si 0.93 -0.52 25.07 -169.99 -4.26 -4.78 16 20 H -0.25 -0.03 7.11 56.52 0.40 0.38 16 21 H -0.24 -0.27 7.11 56.52 0.40 0.13 16 22 H -0.25 0.17 7.11 56.52 0.40 0.57 16 23 C -0.06 -0.12 8.40 -39.58 -0.33 -0.46 16 24 C -0.12 -0.41 6.24 -39.37 -0.25 -0.65 16 25 Br -0.02 -0.11 33.16 -68.01 -2.26 -2.36 16 26 H 0.07 -0.16 7.96 -51.93 -0.41 -0.57 16 27 H 0.07 -0.15 7.96 -51.93 -0.41 -0.56 16 28 H 0.07 -0.20 7.79 -51.93 -0.40 -0.60 16 29 H 0.07 -0.12 7.96 -51.93 -0.41 -0.54 16 30 H 0.07 -0.12 7.96 -51.93 -0.41 -0.53 16 31 H 0.07 -0.12 7.96 -51.93 -0.41 -0.54 16 32 H 0.07 -0.20 7.79 -51.93 -0.40 -0.61 16 33 H 0.07 -0.15 7.96 -51.93 -0.41 -0.56 16 34 H 0.07 -0.16 7.96 -51.93 -0.41 -0.57 16 35 H 0.08 -0.22 7.96 -51.93 -0.41 -0.64 16 36 H 0.08 -0.22 7.96 -51.93 -0.41 -0.64 16 37 H 0.07 -0.30 7.79 -51.93 -0.40 -0.71 16 38 H 0.07 -0.30 7.79 -51.93 -0.40 -0.71 16 39 H 0.07 0.03 8.14 -51.93 -0.42 -0.39 16 40 H 0.07 0.03 8.14 -51.93 -0.42 -0.39 16 41 H 0.40 -2.04 8.47 -40.82 -0.35 -2.39 16 42 H 0.10 -0.36 7.66 -51.93 -0.40 -0.76 16 43 H 0.10 -0.35 7.66 -51.93 -0.40 -0.74 16 44 H 0.14 -0.47 6.30 -52.49 -0.33 -0.80 16 45 H 0.14 -0.26 8.06 -52.49 -0.42 -0.68 16 46 H 0.08 -0.25 7.96 -51.93 -0.41 -0.66 16 47 H 0.38 -1.91 8.74 45.56 0.40 -1.51 16 48 H 0.14 0.18 4.87 -52.49 -0.26 -0.07 16 LS Contribution 416.50 15.07 6.28 6.28 Total: 0.00 -9.79 416.50 -10.14 -19.93 By element: Atomic # 1 Polarization: -7.95 SS G_CDS: -7.15 Total: -15.10 kcal Atomic # 6 Polarization: 5.55 SS G_CDS: 0.70 Total: 6.25 kcal Atomic # 7 Polarization: 1.15 SS G_CDS: -0.33 Total: 0.81 kcal Atomic # 8 Polarization: -4.04 SS G_CDS: -1.04 Total: -5.08 kcal Atomic # 14 Polarization: -4.39 SS G_CDS: -6.33 Total: -10.72 kcal Atomic # 35 Polarization: -0.11 SS G_CDS: -2.26 Total: -2.36 kcal Total LS contribution 6.28 Total: 6.28 kcal Total: -9.79 -10.14 -19.93 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9704008_6201210.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -105.646 kcal (2) G-P(sol) polarization free energy of solvation -9.789 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -115.434 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.137 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.925 kcal (6) G-S(sol) free energy of system = (1) + (5) -125.571 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.55 seconds