Wall clock time and date at job start Tue Mar 9 2021 13:19:15 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42894 * 1 3 3 C 1.35964 * 117.00394 * 2 1 4 4 C 1.39443 * 120.12665 * 180.02562 * 3 2 1 5 5 O 1.34782 * 133.24611 * 0.04428 * 4 3 2 6 6 C 1.34929 * 110.84502 * 179.97438 * 5 4 3 7 7 C 1.46991 * 125.13536 * 179.97438 * 6 5 4 8 8 O 1.21661 * 119.99524 * 180.02562 * 7 6 5 9 9 N 1.34769 * 120.00427 * 0.04020 * 7 6 5 10 10 C 1.46504 * 120.00240 * 180.02562 * 9 7 6 11 11 C 1.52991 * 109.47250 * 180.02562 * 10 9 7 12 12 C 1.53006 * 109.47182 * 180.02562 * 11 10 9 13 13 Si 1.86299 * 109.47337 * 180.02562 * 12 11 10 14 14 C 1.86297 * 109.47154 * 59.99324 * 13 12 11 15 15 C 1.86298 * 109.47158 * 179.97438 * 13 12 11 16 16 C 1.86305 * 109.46557 * 299.99604 * 13 12 11 17 17 C 1.35805 * 109.71677 * 0.02562 * 6 5 4 18 18 C 1.40606 * 119.13893 * 180.02562 * 4 3 2 19 19 C 1.39783 * 120.11899 * 0.03210 * 18 4 3 20 20 C 1.50699 * 120.09067 * 180.02562 * 19 18 4 21 21 O 1.42904 * 109.47388 * 74.98011 * 20 19 18 22 22 Si 1.86301 * 109.46972 * 194.97502 * 20 19 18 23 23 H 1.48507 * 109.47066 * 59.99883 * 22 20 19 24 24 H 1.48501 * 109.47351 * 179.97438 * 22 20 19 25 25 H 1.48500 * 109.47110 * 300.00206 * 22 20 19 26 26 C 1.36627 * 119.81258 * 359.97438 * 19 18 4 27 27 C 1.38268 * 120.11530 * 0.37965 * 3 2 1 28 28 H 1.08998 * 109.47283 * 59.99835 * 1 2 3 29 29 H 1.09000 * 109.47205 * 179.97438 * 1 2 3 30 30 H 1.09003 * 109.46972 * 299.99570 * 1 2 3 31 31 H 0.97002 * 120.00266 * 0.02562 * 9 7 6 32 32 H 1.09001 * 109.47131 * 300.00288 * 10 9 7 33 33 H 1.08999 * 109.46904 * 59.99620 * 10 9 7 34 34 H 1.09001 * 109.47147 * 300.00105 * 11 10 9 35 35 H 1.08994 * 109.47333 * 60.00232 * 11 10 9 36 36 H 1.09009 * 109.46734 * 299.99637 * 12 11 10 37 37 H 1.08999 * 109.47219 * 59.99295 * 12 11 10 38 38 H 1.09001 * 109.46874 * 60.00365 * 14 13 12 39 39 H 1.08998 * 109.46886 * 179.97438 * 14 13 12 40 40 H 1.08999 * 109.47312 * 300.00029 * 14 13 12 41 41 H 1.09008 * 109.46921 * 59.99598 * 15 13 12 42 42 H 1.08998 * 109.47305 * 179.97438 * 15 13 12 43 43 H 1.09001 * 109.47208 * 299.99842 * 15 13 12 44 44 H 1.08999 * 109.47062 * 60.00496 * 16 13 12 45 45 H 1.09005 * 109.46870 * 179.97438 * 16 13 12 46 46 H 1.08995 * 109.47327 * 299.99602 * 16 13 12 47 47 H 1.08003 * 126.95435 * 180.02562 * 17 6 5 48 48 H 1.08997 * 109.47848 * 314.97475 * 20 19 18 49 49 H 0.96698 * 114.00100 * 59.99619 * 21 20 19 50 50 H 1.08002 * 119.75001 * 179.97438 * 26 19 18 51 51 H 1.07992 * 119.66401 * 359.93616 * 27 3 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4289 0.0000 0.0000 3 6 2.0463 1.2114 0.0000 4 6 3.4386 1.2874 -0.0005 5 8 4.4142 0.3574 -0.0019 6 6 5.6318 0.9387 -0.0024 7 6 6.9132 0.2185 -0.0033 8 8 7.9596 0.8390 -0.0033 9 7 6.9288 -1.1291 -0.0045 10 6 8.2059 -1.8469 -0.0048 11 6 7.9437 -3.3542 -0.0068 12 6 9.2775 -4.1039 -0.0065 13 14 8.9584 -5.9394 -0.0097 14 6 7.9883 -6.3983 -1.5325 15 6 10.5824 -6.8521 -0.0101 16 6 7.9851 -6.4030 1.5098 17 6 5.4944 2.2898 -0.0009 18 6 4.0554 2.5509 0.0000 19 6 3.2765 3.7116 0.0018 20 6 3.9381 5.0656 0.0018 21 8 4.4593 5.3412 -1.3000 22 14 2.6868 6.3682 0.4581 23 1 2.1451 6.0819 1.8109 24 1 3.3389 7.7024 0.4588 25 1 1.5791 6.3586 -0.5308 26 6 1.9136 3.6151 0.0024 27 6 1.2957 2.3726 0.0079 28 1 -0.3634 0.5138 -0.8899 29 1 -0.3633 -1.0277 -0.0005 30 1 -0.3633 0.5138 0.8901 31 1 6.0944 -1.6239 -0.0051 32 1 8.7746 -1.5762 -0.8944 33 1 8.7742 -1.5777 0.8855 34 1 7.3748 -3.6253 0.8826 35 1 7.3757 -3.6231 -0.8973 36 1 9.8468 -3.8329 -0.8958 37 1 9.8453 -3.8350 0.8843 38 1 8.5577 -6.1270 -2.4215 39 1 7.8019 -7.4722 -1.5346 40 1 7.0380 -5.8643 -1.5327 41 1 11.1504 -6.5835 0.8807 42 1 10.3957 -7.9260 -0.0116 43 1 11.1515 -6.5807 -0.8993 44 1 7.0349 -5.8689 1.5095 45 1 7.7979 -7.4768 1.5077 46 1 8.5527 -6.1345 2.4007 47 1 6.2873 3.0231 -0.0012 48 1 4.7512 5.0728 0.7277 49 1 3.7899 5.3507 -1.9977 50 1 1.3128 4.5125 0.0042 51 1 0.2175 2.3120 0.0131 RHF calculation, no. of doubly occupied orbitals= 66 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_9704008_6672420.mol2 51 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:19:15 Heat of formation + Delta-G solvation = -125.032792 kcal Electronic energy + Delta-G solvation = -30162.475744 eV Core-core repulsion = 25959.064238 eV Total energy + Delta-G solvation = -4203.411506 eV No. of doubly occupied orbitals = 66 Molecular weight (most abundant/longest-lived isotopes) = 365.166 amu Computer time = 0.67 seconds Orbital eigenvalues (eV) -43.63035 -40.89665 -40.28051 -39.08562 -37.00399 -36.86483 -33.67718 -33.52457 -31.90588 -30.96196 -29.58225 -28.78127 -28.45279 -28.44970 -27.23651 -26.25568 -24.41059 -23.95529 -22.57621 -21.90251 -21.51014 -19.69007 -18.93664 -18.55717 -17.87868 -17.67012 -17.04881 -17.01252 -16.84125 -16.45854 -16.22844 -15.86685 -15.67156 -15.31476 -15.06686 -14.72390 -14.54243 -14.30422 -14.21606 -14.12743 -14.09650 -13.95523 -13.60296 -13.53514 -13.49076 -13.38266 -13.33789 -13.16545 -13.13461 -13.11742 -12.64713 -12.63053 -12.37942 -12.17908 -12.09260 -11.88771 -11.67394 -11.41293 -10.90970 -10.84998 -10.82372 -10.58250 -10.44705 -10.20068 -9.73875 -8.97109 -0.55555 0.12881 0.75363 1.08813 1.32677 1.36117 1.48407 1.73329 1.83813 1.85463 1.87170 2.01401 2.12454 2.12929 2.42327 2.60580 3.26231 3.44221 3.53518 3.63736 3.84866 3.88674 3.97021 3.98918 4.06787 4.08809 4.11613 4.20746 4.23916 4.44926 4.48755 4.50936 4.60935 4.64939 4.69354 4.71702 4.73437 4.74195 4.74323 4.75603 4.84379 4.89886 4.94618 5.09163 5.10762 5.22291 5.24888 5.32451 5.37179 5.46993 5.52788 5.52867 5.66174 6.17284 6.39374 6.53634 7.00393 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.024 3.976 2 O -0.310 6.310 3 C 0.150 3.850 4 C 0.046 3.954 5 O -0.174 6.174 6 C -0.023 4.023 7 C 0.600 3.400 8 O -0.510 6.510 9 N -0.718 5.718 10 C 0.117 3.883 11 C -0.122 4.122 12 C -0.411 4.411 13 Si 1.013 2.987 14 C -0.452 4.452 15 C -0.452 4.452 16 C -0.452 4.452 17 C -0.104 4.104 18 C -0.080 4.080 19 C -0.098 4.098 20 C -0.079 4.079 21 O -0.534 6.534 22 Si 0.951 3.049 23 H -0.248 1.248 24 H -0.251 1.251 25 H -0.250 1.250 26 C -0.102 4.102 27 C -0.178 4.178 28 H 0.060 0.940 29 H 0.105 0.895 30 H 0.060 0.940 31 H 0.408 0.592 32 H 0.073 0.927 33 H 0.073 0.927 34 H 0.072 0.928 35 H 0.072 0.928 36 H 0.079 0.921 37 H 0.079 0.921 38 H 0.068 0.932 39 H 0.067 0.933 40 H 0.068 0.932 41 H 0.068 0.932 42 H 0.068 0.932 43 H 0.068 0.932 44 H 0.068 0.932 45 H 0.067 0.933 46 H 0.068 0.932 47 H 0.176 0.824 48 H 0.119 0.881 49 H 0.376 0.624 50 H 0.136 0.864 51 H 0.147 0.853 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -5.039 -2.151 0.165 5.481 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.071 4.071 2 O -0.224 6.224 3 C 0.104 3.896 4 C -0.003 4.003 5 O -0.076 6.076 6 C -0.074 4.074 7 C 0.385 3.615 8 O -0.387 6.387 9 N -0.369 5.369 10 C -0.006 4.006 11 C -0.160 4.160 12 C -0.497 4.497 13 Si 1.209 2.791 14 C -0.559 4.559 15 C -0.559 4.559 16 C -0.559 4.559 17 C -0.124 4.124 18 C -0.081 4.081 19 C -0.098 4.098 20 C -0.190 4.190 21 O -0.339 6.339 22 Si 0.773 3.227 23 H -0.171 1.171 24 H -0.174 1.174 25 H -0.174 1.174 26 C -0.120 4.120 27 C -0.196 4.196 28 H 0.079 0.921 29 H 0.124 0.876 30 H 0.079 0.921 31 H 0.243 0.757 32 H 0.091 0.909 33 H 0.091 0.909 34 H 0.091 0.909 35 H 0.091 0.909 36 H 0.098 0.902 37 H 0.098 0.902 38 H 0.087 0.913 39 H 0.087 0.913 40 H 0.087 0.913 41 H 0.087 0.913 42 H 0.087 0.913 43 H 0.087 0.913 44 H 0.087 0.913 45 H 0.087 0.913 46 H 0.087 0.913 47 H 0.193 0.807 48 H 0.136 0.864 49 H 0.223 0.777 50 H 0.153 0.847 51 H 0.165 0.835 Dipole moment (debyes) X Y Z Total from point charges -4.260 -1.547 0.727 4.590 hybrid contribution -0.915 -0.512 -0.400 1.122 sum -5.175 -2.059 0.326 5.579 Atomic orbital electron populations 1.23186 0.77353 1.04748 1.01766 1.86171 1.22123 1.25683 1.88389 1.17730 0.86522 0.85841 0.99462 1.18776 0.87437 0.87024 1.07024 1.84052 1.12678 1.34721 1.76118 1.22018 0.83874 0.92654 1.08813 1.16626 0.85389 0.82208 0.77301 1.90926 1.30328 1.67494 1.49931 1.45981 1.10950 1.05730 1.74285 1.21636 0.84549 0.91342 1.03047 1.21436 0.98435 0.93090 1.03034 1.26145 0.99347 1.18875 1.05321 0.79149 0.66952 0.66001 0.67007 1.26175 1.08845 1.05396 1.15498 1.26143 1.16991 1.08373 1.04442 1.26175 1.08868 1.05419 1.15444 1.22757 0.94717 0.94340 1.00632 1.19391 0.92666 0.91964 1.04052 1.19436 0.92738 0.94589 1.03081 1.24994 1.06833 0.97570 0.89580 1.86557 1.37961 1.93355 1.15996 0.85691 0.77281 0.78478 0.81265 1.17097 1.17420 1.17447 1.20548 0.93548 0.97795 1.00071 1.20946 1.00330 0.90547 1.07825 0.92126 0.87628 0.92114 0.75676 0.90872 0.90873 0.90900 0.90892 0.90174 0.90173 0.91280 0.91331 0.91300 0.91269 0.91288 0.91262 0.91303 0.91332 0.91280 0.80676 0.86360 0.77712 0.84690 0.83544 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.06 9.81 101.05 0.99 0.93 16 2 O -0.31 -0.48 10.50 -19.63 -0.21 -0.69 16 3 C 0.15 0.29 6.70 -39.12 -0.26 0.03 16 4 C 0.05 0.16 7.35 -38.24 -0.28 -0.13 16 5 O -0.17 -0.62 10.28 2.64 0.03 -0.59 16 6 C -0.02 -0.08 7.07 -36.91 -0.26 -0.34 16 7 C 0.60 2.22 7.80 -12.72 -0.10 2.12 16 8 O -0.51 -3.39 16.83 5.22 0.09 -3.30 16 9 N -0.72 -0.66 5.55 -61.52 -0.34 -1.01 16 10 C 0.12 0.00 5.67 -4.04 -0.02 -0.02 16 11 C -0.12 0.27 4.70 -26.73 -0.13 0.14 16 12 C -0.41 1.06 4.45 37.16 0.17 1.23 16 13 Si 1.01 -3.30 12.19 -169.99 -2.07 -5.37 16 14 C -0.45 0.87 8.65 101.05 0.87 1.74 16 15 C -0.45 0.75 8.65 101.05 0.87 1.63 16 16 C -0.45 0.87 8.65 101.05 0.87 1.75 16 17 C -0.10 -0.33 10.68 -37.24 -0.40 -0.73 16 18 C -0.08 -0.22 6.16 -105.21 -0.65 -0.87 16 19 C -0.10 -0.10 5.26 -104.63 -0.55 -0.65 16 20 C -0.08 0.01 2.71 36.01 0.10 0.11 16 21 O -0.53 -0.32 12.88 -35.23 -0.45 -0.77 16 22 Si 0.95 -0.98 25.50 -169.99 -4.33 -5.31 16 23 H -0.25 0.11 7.11 56.52 0.40 0.51 16 24 H -0.25 -0.13 7.11 56.52 0.40 0.27 16 25 H -0.25 0.39 6.74 56.52 0.38 0.77 16 26 C -0.10 0.02 8.62 -39.97 -0.34 -0.32 16 27 C -0.18 0.04 9.03 -39.37 -0.36 -0.31 16 28 H 0.06 -0.22 7.68 -51.93 -0.40 -0.62 16 29 H 0.11 -0.42 8.14 -51.93 -0.42 -0.84 16 30 H 0.06 -0.22 7.64 -51.93 -0.40 -0.62 16 31 H 0.41 -0.35 8.19 -40.82 -0.33 -0.69 16 32 H 0.07 0.05 8.14 -51.93 -0.42 -0.37 16 33 H 0.07 0.05 8.14 -51.93 -0.42 -0.37 16 34 H 0.07 -0.21 7.79 -51.93 -0.40 -0.61 16 35 H 0.07 -0.21 7.79 -51.93 -0.40 -0.61 16 36 H 0.08 -0.20 7.96 -51.92 -0.41 -0.61 16 37 H 0.08 -0.20 7.96 -51.93 -0.41 -0.61 16 38 H 0.07 -0.12 7.96 -51.93 -0.41 -0.53 16 39 H 0.07 -0.11 7.96 -51.93 -0.41 -0.52 16 40 H 0.07 -0.14 7.79 -51.93 -0.40 -0.54 16 41 H 0.07 -0.10 7.96 -51.92 -0.41 -0.52 16 42 H 0.07 -0.10 7.96 -51.93 -0.41 -0.51 16 43 H 0.07 -0.10 7.96 -51.93 -0.41 -0.52 16 44 H 0.07 -0.14 7.79 -51.93 -0.40 -0.54 16 45 H 0.07 -0.11 7.96 -51.93 -0.41 -0.52 16 46 H 0.07 -0.12 7.96 -51.93 -0.41 -0.53 16 47 H 0.18 0.42 8.06 -52.48 -0.42 0.00 16 48 H 0.12 -0.07 7.96 -51.93 -0.41 -0.48 16 49 H 0.38 -1.04 8.70 45.56 0.40 -0.64 16 50 H 0.14 -0.30 4.84 -52.49 -0.25 -0.55 16 51 H 0.15 -0.44 6.26 -52.49 -0.33 -0.77 16 LS Contribution 423.23 15.07 6.38 6.38 Total: 0.00 -7.99 423.23 -7.96 -15.95 By element: Atomic # 1 Polarization: -4.02 SS G_CDS: -7.58 Total: -11.59 kcal Atomic # 6 Polarization: 5.77 SS G_CDS: 0.53 Total: 6.30 kcal Atomic # 7 Polarization: -0.66 SS G_CDS: -0.34 Total: -1.01 kcal Atomic # 8 Polarization: -4.80 SS G_CDS: -0.54 Total: -5.35 kcal Atomic # 14 Polarization: -4.28 SS G_CDS: -6.41 Total: -10.69 kcal Total LS contribution 6.38 Total: 6.38 kcal Total: -7.99 -7.96 -15.95 kcal The number of atoms in the molecule is 51 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9704008_6672420.mol2 51 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -109.078 kcal (2) G-P(sol) polarization free energy of solvation -7.992 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -117.070 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.963 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -15.955 kcal (6) G-S(sol) free energy of system = (1) + (5) -125.033 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.67 seconds