Wall clock time and date at job start Tue Mar 9 2021 13:23:41 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53001 * 1 3 3 N 1.46505 * 109.47200 * 2 1 4 4 C 1.34776 * 120.00131 * 179.97438 * 3 2 1 5 5 O 1.21864 * 119.99486 * 0.02562 * 4 3 2 6 6 C 1.40186 * 120.00129 * 180.02562 * 4 3 2 7 7 S 1.55354 * 120.00068 * 180.02562 * 6 4 3 8 8 O 1.52204 * 102.99563 * 286.86639 * 7 6 4 9 9 C 1.76202 * 103.00084 * 179.97438 * 7 6 4 10 10 C 1.38265 * 119.96205 * 29.97181 * 9 7 6 11 11 C 1.38309 * 120.14424 * 180.02562 * 10 9 7 12 12 C 1.38095 * 120.06953 * 359.67655 * 11 10 9 13 13 C 1.38909 * 119.92567 * 0.62181 * 12 11 10 14 14 N 1.39844 * 120.07045 * 179.67307 * 13 12 11 15 15 C 1.34776 * 120.00345 * 214.81796 * 14 13 12 16 16 O 1.21589 * 119.99916 * 355.37141 * 15 14 13 17 17 C 1.47668 * 120.00239 * 175.36572 * 15 14 13 18 18 C 1.39627 * 120.15480 * 0.02562 * 17 15 14 19 19 C 1.38109 * 119.84817 * 180.02562 * 18 17 15 20 20 F 1.35100 * 119.91852 * 179.97438 * 19 18 17 21 21 C 1.38619 * 120.16800 * 359.97438 * 19 18 17 22 22 C 1.50693 * 119.84175 * 179.97438 * 21 19 18 23 23 O 1.42900 * 109.47227 * 75.02360 * 22 21 19 24 24 Si 1.86306 * 109.47483 * 315.02471 * 22 21 19 25 25 H 1.48500 * 109.46691 * 59.99722 * 24 22 21 26 26 H 1.48499 * 109.47410 * 179.97438 * 24 22 21 27 27 H 1.48501 * 109.46901 * 299.99934 * 24 22 21 28 28 C 1.38231 * 120.31514 * 0.02562 * 21 19 18 29 29 C 1.38268 * 120.15131 * 359.97438 * 28 21 19 30 30 F 1.35097 * 120.08518 * 179.97438 * 29 28 21 31 31 C 1.38122 * 119.96415 * 209.99746 * 9 7 6 32 32 H 1.08994 * 109.47184 * 179.97438 * 1 2 3 33 33 H 1.08994 * 109.47162 * 300.00473 * 1 2 3 34 34 H 1.09004 * 109.46616 * 60.00187 * 1 2 3 35 35 H 1.09003 * 109.47639 * 239.99931 * 2 1 3 36 36 H 1.09000 * 109.46932 * 119.99462 * 2 1 3 37 37 H 0.96997 * 119.99867 * 359.97438 * 3 2 1 38 38 H 1.07997 * 119.99676 * 359.97438 * 6 4 3 39 39 H 1.07997 * 119.92796 * 0.02562 * 10 9 7 40 40 H 1.08001 * 119.96350 * 179.97438 * 11 10 9 41 41 H 1.07996 * 120.03129 * 180.29725 * 12 11 10 42 42 H 0.97007 * 120.00194 * 34.82506 * 14 13 12 43 43 H 1.07997 * 120.07820 * 359.74093 * 18 17 15 44 44 H 1.09000 * 109.47117 * 195.02436 * 22 21 19 45 45 H 0.96701 * 113.99756 * 300.00482 * 23 22 21 46 46 H 1.08002 * 119.92402 * 179.97438 * 28 21 19 47 47 H 1.08000 * 120.03490 * 0.02562 * 31 9 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 7 2.0184 1.3813 0.0000 4 6 3.3434 1.6275 0.0005 5 8 4.1353 0.7012 0.0005 6 6 3.8107 2.9492 0.0011 7 16 5.3381 3.2331 0.0011 8 8 5.7534 2.8720 1.4201 9 6 5.4141 4.9935 0.0011 10 6 4.4072 5.7281 0.5995 11 6 4.4628 7.1101 0.6012 12 6 5.5283 7.7605 0.0107 13 6 6.5384 7.0254 -0.5968 14 7 7.6153 7.6811 -1.2017 15 6 8.1780 7.1683 -2.3138 16 8 7.8057 6.0934 -2.7433 17 6 9.2467 7.9117 -3.0108 18 6 9.6771 9.1461 -2.5202 19 6 10.6767 9.8363 -3.1774 20 9 11.0938 11.0310 -2.7042 21 6 11.2531 9.3063 -4.3213 22 6 12.3428 10.0660 -5.0328 23 8 13.5598 9.9594 -4.2915 24 14 11.8581 11.8591 -5.1763 25 1 11.6624 12.4290 -3.8190 26 1 12.9322 12.6078 -5.8769 27 1 10.5934 11.9698 -5.9467 28 6 10.8323 8.0849 -4.8129 29 6 9.8325 7.3827 -4.1654 30 9 9.4219 6.1893 -4.6474 31 6 6.4792 5.6380 -0.5972 32 1 -0.3633 -1.0276 -0.0005 33 1 -0.3633 0.5139 0.8899 34 1 -0.3633 0.5138 -0.8901 35 1 1.8934 -0.5138 -0.8900 36 1 1.8933 -0.5138 0.8900 37 1 1.3881 2.1185 -0.0004 38 1 3.1089 3.7700 0.0006 39 1 3.5755 5.2217 1.0666 40 1 3.6744 7.6811 1.0691 41 1 5.5735 8.8395 0.0166 42 1 7.9574 8.5051 -0.8209 43 1 9.2262 9.5624 -1.6315 44 1 12.4864 9.6476 -6.0290 45 1 13.5053 10.3130 -3.3931 46 1 11.2854 7.6781 -5.7049 47 1 7.2650 5.0635 -1.0652 RHF calculation, no. of doubly occupied orbitals= 75 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_9704022_12360598.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:23:41 Heat of formation + Delta-G solvation = -237.145517 kcal Electronic energy + Delta-G solvation = -37309.497170 eV Core-core repulsion = 31797.807017 eV Total energy + Delta-G solvation = -5511.690153 eV No. of doubly occupied orbitals = 75 Molecular weight (most abundant/longest-lived isotopes) = 425.099 amu Computer time = 0.99 seconds Orbital eigenvalues (eV) -50.42241 -50.03685 -41.84441 -40.26414 -39.89988 -39.27923 -37.60344 -36.06730 -35.82357 -33.85980 -33.42294 -32.00100 -31.75066 -31.32109 -30.73093 -29.04989 -27.69341 -24.68457 -24.45501 -24.09103 -23.53764 -22.93618 -21.77912 -21.40897 -19.92745 -19.27760 -18.85284 -18.44926 -17.85394 -17.70713 -17.58708 -17.38843 -17.14829 -17.04185 -16.69939 -16.33892 -16.27190 -16.14213 -16.09502 -15.91995 -15.63712 -15.42810 -15.25846 -14.97263 -14.66089 -14.57204 -14.53505 -14.44998 -14.41308 -13.95303 -13.81487 -13.40420 -13.30709 -13.15065 -12.99857 -12.82990 -12.70757 -12.67415 -12.45449 -12.38954 -12.29922 -12.11239 -11.58316 -11.28667 -11.04673 -10.72593 -10.51448 -10.33645 -10.27996 -9.94789 -9.81483 -9.78889 -9.26584 -9.06772 -7.70941 -0.81314 -0.24286 0.14271 0.34933 1.11343 1.40462 1.53642 1.59530 1.67006 1.85129 1.98255 2.25227 2.66205 2.75268 2.80968 2.89883 2.98814 3.14614 3.31771 3.34901 3.48517 3.60057 3.86214 3.93824 4.09745 4.14817 4.18659 4.22793 4.28208 4.36379 4.36757 4.40527 4.48774 4.52263 4.57877 4.68744 4.76481 4.79672 4.88035 4.88767 5.01710 5.13470 5.19391 5.23610 5.32922 5.39043 5.44057 5.52132 5.79385 5.99416 6.01943 6.23382 6.59228 6.92792 7.09184 8.04417 Molecular weight = 425.10amu Principal moments of inertia in cm(-1) A = 0.016102 B = 0.001423 C = 0.001364 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1738.446455 B =19675.038026 C =20524.662309 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.143 4.143 2 C 0.116 3.884 3 N -0.754 5.754 4 C 0.587 3.413 5 O -0.681 6.681 6 C -1.091 5.091 7 S 1.474 4.526 8 O -1.018 7.018 9 C -0.419 4.419 10 C -0.103 4.103 11 C -0.115 4.115 12 C -0.107 4.107 13 C 0.124 3.876 14 N -0.645 5.645 15 C 0.550 3.450 16 O -0.536 6.536 17 C -0.151 4.151 18 C -0.072 4.072 19 C 0.076 3.924 20 F -0.116 7.116 21 C -0.089 4.089 22 C -0.082 4.082 23 O -0.541 6.541 24 Si 0.967 3.033 25 H -0.230 1.230 26 H -0.266 1.266 27 H -0.262 1.262 28 C -0.105 4.105 29 C 0.138 3.862 30 F -0.125 7.125 31 C -0.072 4.072 32 H 0.093 0.907 33 H 0.061 0.939 34 H 0.070 0.930 35 H 0.045 0.955 36 H 0.029 0.971 37 H 0.395 0.605 38 H 0.106 0.894 39 H 0.094 0.906 40 H 0.157 0.843 41 H 0.179 0.821 42 H 0.430 0.570 43 H 0.183 0.817 44 H 0.146 0.854 45 H 0.389 0.611 46 H 0.181 0.819 47 H 0.136 0.864 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 12.845 26.910 -13.938 32.915 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.201 4.201 2 C -0.009 4.009 3 N -0.406 5.406 4 C 0.395 3.605 5 O -0.578 6.578 6 C -1.224 5.224 7 S 1.681 4.319 8 O -1.014 7.014 9 C -0.516 4.516 10 C -0.122 4.122 11 C -0.135 4.135 12 C -0.127 4.127 13 C 0.029 3.971 14 N -0.293 5.293 15 C 0.339 3.661 16 O -0.412 6.412 17 C -0.156 4.156 18 C -0.091 4.091 19 C 0.056 3.944 20 F -0.094 7.094 21 C -0.091 4.091 22 C -0.192 4.192 23 O -0.348 6.348 24 Si 0.789 3.211 25 H -0.153 1.153 26 H -0.191 1.191 27 H -0.186 1.186 28 C -0.124 4.124 29 C 0.117 3.883 30 F -0.104 7.104 31 C -0.093 4.093 32 H 0.112 0.888 33 H 0.080 0.920 34 H 0.089 0.911 35 H 0.063 0.937 36 H 0.047 0.953 37 H 0.228 0.772 38 H 0.124 0.876 39 H 0.112 0.888 40 H 0.174 0.826 41 H 0.196 0.804 42 H 0.271 0.729 43 H 0.200 0.800 44 H 0.164 0.836 45 H 0.238 0.762 46 H 0.199 0.801 47 H 0.154 0.846 Dipole moment (debyes) X Y Z Total from point charges 13.775 25.508 -14.852 32.573 hybrid contribution -2.437 0.685 2.538 3.585 sum 11.338 26.193 -12.314 31.085 Atomic orbital electron populations 1.21884 0.91197 1.04195 1.02779 1.21172 0.96434 0.83662 0.99607 1.45653 1.06614 1.07831 1.80510 1.15545 0.82000 0.88166 0.74836 1.90556 1.56515 1.48524 1.62243 1.26843 1.20946 1.00824 1.73747 1.65917 0.84189 0.78382 1.03392 1.94354 1.84957 1.81705 1.40338 1.27915 0.99546 1.20808 1.03314 1.21227 0.97575 0.95872 0.97556 1.21366 0.99415 0.92877 0.99797 1.21294 0.91399 1.01409 0.98571 1.17735 0.90094 0.90885 0.98371 1.43025 1.31761 1.28250 1.26220 1.18439 0.82068 0.85231 0.80346 1.90923 1.62224 1.21936 1.66162 1.19609 1.00440 0.97574 0.97935 1.21336 0.95332 0.91757 1.00705 1.17355 0.97738 0.83727 0.95542 1.91624 1.88908 1.41129 1.87759 1.20572 0.98381 0.95418 0.94712 1.25163 0.84583 1.10595 0.98840 1.86563 1.31139 1.85780 1.31350 0.85698 0.79542 0.74251 0.81645 1.15301 1.19113 1.18586 1.21117 0.95597 0.93423 1.02239 1.18046 0.95122 0.82267 0.92817 1.91617 1.89006 1.42910 1.86819 1.20885 0.97199 0.94166 0.97096 0.88846 0.91991 0.91141 0.93695 0.95257 0.77171 0.87562 0.88775 0.82559 0.80409 0.72879 0.80012 0.83620 0.76186 0.80119 0.84620 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 16. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.14 -4.01 10.03 71.98 0.72 -3.29 16 2 C 0.12 4.84 6.39 86.38 0.55 5.39 16 3 N -0.75 -37.98 5.54 -473.38 -2.62 -40.60 16 4 C 0.59 36.95 7.50 84.71 0.64 37.58 16 5 O -0.68 -47.53 16.28 -4.87 -0.08 -47.61 16 6 C -1.09 -67.02 8.32 68.29 0.57 -66.46 16 7 S 1.47 86.26 12.78 -56.49 -0.72 85.54 16 8 O -1.02 -74.65 18.25 -148.98 -2.72 -77.37 16 9 C -0.42 -20.32 5.68 22.25 0.13 -20.20 16 10 C -0.10 -4.58 8.93 22.29 0.20 -4.38 16 11 C -0.12 -3.66 10.04 22.25 0.22 -3.43 16 12 C -0.11 -2.73 9.97 22.40 0.22 -2.50 16 13 C 0.12 3.76 6.30 38.18 0.24 4.00 16 14 N -0.64 -13.64 5.28 -306.24 -1.62 -15.26 16 15 C 0.55 13.97 7.61 86.73 0.66 14.63 16 16 O -0.54 -19.08 12.77 -4.00 -0.05 -19.14 16 17 C -0.15 -2.67 5.88 -20.06 -0.12 -2.78 16 18 C -0.07 -0.71 9.51 22.57 0.21 -0.49 16 19 C 0.08 0.69 6.60 22.33 0.15 0.84 16 20 F -0.12 -0.93 12.55 44.97 0.56 -0.37 16 21 C -0.09 -0.81 4.79 -19.78 -0.09 -0.90 16 22 C -0.08 -0.53 2.80 71.23 0.20 -0.33 16 23 O -0.54 -4.56 12.88 -148.98 -1.92 -6.48 16 24 Si 0.97 7.07 26.08 68.60 1.79 8.86 16 25 H -0.23 -1.80 5.28 99.48 0.52 -1.28 16 26 H -0.27 -2.61 7.11 99.48 0.71 -1.91 16 27 H -0.26 -2.48 7.11 99.48 0.71 -1.78 16 28 C -0.11 -1.18 9.63 22.28 0.21 -0.97 16 29 C 0.14 2.56 7.28 22.67 0.17 2.72 16 30 F -0.13 -3.23 15.55 44.97 0.70 -2.53 16 31 C -0.07 -2.95 8.40 22.39 0.19 -2.76 16 32 H 0.09 2.08 8.14 -2.39 -0.02 2.06 16 33 H 0.06 1.66 8.14 -2.39 -0.02 1.64 16 34 H 0.07 1.79 8.14 -2.38 -0.02 1.77 16 35 H 0.04 1.92 8.14 -2.39 -0.02 1.90 16 36 H 0.03 1.32 8.14 -2.39 -0.02 1.30 16 37 H 0.39 17.54 8.42 -92.71 -0.78 16.76 16 38 H 0.11 6.21 6.09 -7.38 -0.04 6.17 16 39 H 0.09 4.63 6.49 -2.91 -0.02 4.61 16 40 H 0.16 3.74 8.06 -2.91 -0.02 3.72 16 41 H 0.18 2.50 8.06 -2.91 -0.02 2.48 16 42 H 0.43 4.59 6.87 -92.70 -0.64 3.95 16 43 H 0.18 0.55 6.41 -2.91 -0.02 0.53 16 44 H 0.15 0.40 7.76 -2.39 -0.02 0.38 16 45 H 0.39 1.19 8.40 -74.06 -0.62 0.56 16 46 H 0.18 1.13 7.99 -2.91 -0.02 1.11 16 47 H 0.14 5.65 6.22 -2.91 -0.02 5.63 16 Total: -1.00 -106.69 414.58 -2.00 -108.69 By element: Atomic # 1 Polarization: 49.99 SS G_CDS: -0.39 Total: 49.61 kcal Atomic # 6 Polarization: -48.40 SS G_CDS: 5.07 Total: -43.33 kcal Atomic # 7 Polarization: -51.62 SS G_CDS: -4.24 Total: -55.86 kcal Atomic # 8 Polarization: -145.83 SS G_CDS: -4.77 Total: -150.60 kcal Atomic # 9 Polarization: -4.17 SS G_CDS: 1.26 Total: -2.90 kcal Atomic # 14 Polarization: 7.07 SS G_CDS: 1.79 Total: 8.86 kcal Atomic # 16 Polarization: 86.26 SS G_CDS: -0.72 Total: 85.54 kcal Total: -106.69 -2.00 -108.69 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9704022_12360598.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -128.455 kcal (2) G-P(sol) polarization free energy of solvation -106.692 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -235.146 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -1.999 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -108.691 kcal (6) G-S(sol) free energy of system = (1) + (5) -237.146 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.99 seconds