Wall clock time and date at job start Tue Mar 9 2021 13:25:28 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53006 * 1 3 3 N 1.46502 * 109.46994 * 2 1 4 4 C 1.34775 * 119.99797 * 179.97438 * 3 2 1 5 5 O 1.21858 * 120.00108 * 359.97438 * 4 3 2 6 6 C 1.40196 * 119.99509 * 179.97438 * 4 3 2 7 7 S 1.55357 * 119.99411 * 179.97438 * 6 4 3 8 8 O 1.52200 * 103.00113 * 286.87463 * 7 6 4 9 9 C 1.76203 * 102.99673 * 180.02562 * 7 6 4 10 10 C 1.38260 * 119.96488 * 29.97677 * 9 7 6 11 11 C 1.38306 * 120.14448 * 180.02562 * 10 9 7 12 12 C 1.38089 * 120.07424 * 359.97438 * 11 10 9 13 13 C 1.38911 * 119.92367 * 0.02562 * 12 11 10 14 14 N 1.39851 * 120.06761 * 179.97438 * 13 12 11 15 15 C 1.34781 * 119.99572 * 213.26075 * 14 13 12 16 16 O 1.21561 * 120.00070 * 5.28520 * 15 14 13 17 17 C 1.47807 * 119.99487 * 185.28580 * 15 14 13 18 18 C 1.40003 * 120.55922 * 179.97438 * 17 15 14 19 19 C 1.38396 * 118.28535 * 179.97438 * 18 17 15 20 20 C 1.50706 * 120.34313 * 180.02562 * 19 18 17 21 21 O 1.42895 * 109.46977 * 65.00012 * 20 19 18 22 22 Si 1.86298 * 109.46913 * 185.00164 * 20 19 18 23 23 H 1.48493 * 109.47195 * 59.99682 * 22 20 19 24 24 H 1.48498 * 109.47220 * 180.02562 * 22 20 19 25 25 H 1.48503 * 109.46907 * 299.99928 * 22 20 19 26 26 C 1.38307 * 119.30815 * 0.02562 * 19 18 17 27 27 N 1.31948 * 121.08523 * 359.97438 * 26 19 18 28 28 C 1.31668 * 121.88407 * 359.72800 * 27 26 19 29 29 C 1.38135 * 119.96406 * 210.00407 * 9 7 6 30 30 H 1.08999 * 109.46715 * 179.97438 * 1 2 3 31 31 H 1.08996 * 109.47215 * 300.00552 * 1 2 3 32 32 H 1.09004 * 109.46637 * 60.00612 * 1 2 3 33 33 H 1.08996 * 109.47215 * 239.99447 * 2 1 3 34 34 H 1.09004 * 109.46637 * 119.99388 * 2 1 3 35 35 H 0.96999 * 119.99962 * 359.97438 * 3 2 1 36 36 H 1.07993 * 120.00102 * 0.02562 * 6 4 3 37 37 H 1.07999 * 119.92843 * 359.97438 * 10 9 7 38 38 H 1.08007 * 119.96359 * 180.02562 * 11 10 9 39 39 H 1.07999 * 120.03497 * 180.02562 * 12 11 10 40 40 H 0.97002 * 120.00270 * 33.25806 * 14 13 12 41 41 H 1.07996 * 120.85369 * 359.95426 * 18 17 15 42 42 H 1.08997 * 109.46784 * 305.00224 * 20 19 18 43 43 H 0.96699 * 114.00012 * 59.99872 * 21 20 19 44 44 H 1.07997 * 119.45721 * 179.97438 * 26 19 18 45 45 H 1.08004 * 119.72466 * 180.28884 * 28 27 26 46 46 H 1.07997 * 120.03239 * 359.71929 * 29 9 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5301 0.0000 0.0000 3 7 2.0184 1.3812 0.0000 4 6 3.3434 1.6275 0.0005 5 8 4.1353 0.7013 0.0015 6 6 3.8107 2.9493 0.0000 7 16 5.3381 3.2332 0.0012 8 8 5.7520 2.8735 1.4210 9 6 5.4140 4.9935 0.0007 10 6 4.4067 5.7284 0.5981 11 6 4.4622 7.1103 0.5995 12 6 5.5250 7.7607 0.0042 13 6 6.5387 7.0253 -0.5969 14 7 7.6162 7.6809 -1.2011 15 6 8.2037 7.1483 -2.2909 16 8 7.7384 6.1501 -2.8056 17 6 9.4139 7.7778 -2.8600 18 6 10.0341 7.2341 -3.9913 19 6 11.1643 7.8620 -4.4851 20 6 11.8684 7.3167 -5.7009 21 8 11.0074 7.4207 -6.8365 22 14 13.4235 8.2952 -6.0088 23 1 14.3182 8.1872 -4.8285 24 1 14.1171 7.7583 -7.2071 25 1 13.0745 9.7205 -6.2366 26 6 11.6408 8.9952 -3.8512 27 7 11.0354 9.4854 -2.7861 28 6 9.9544 8.9277 -2.2822 29 6 6.4796 5.6380 -0.5970 30 1 -0.3633 -1.0277 -0.0005 31 1 -0.3633 0.5139 0.8899 32 1 -0.3633 0.5138 -0.8901 33 1 1.8934 -0.5139 -0.8899 34 1 1.8933 -0.5138 0.8901 35 1 1.3880 2.1185 -0.0004 36 1 3.1088 3.7701 -0.0004 37 1 3.5742 5.2221 1.0640 38 1 3.6739 7.6814 1.0674 39 1 5.5680 8.8398 0.0060 40 1 7.9406 8.5190 -0.8360 41 1 9.6408 6.3475 -4.4662 42 1 12.1244 6.2705 -5.5336 43 1 10.7384 8.3259 -7.0446 44 1 12.5228 9.4868 -4.2342 45 1 9.4843 9.3610 -1.4117 46 1 7.2682 5.0633 -1.0599 RHF calculation, no. of doubly occupied orbitals= 69 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_9704022_13287814.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:25:28 Heat of formation + Delta-G solvation = -112.030552 kcal Electronic energy + Delta-G solvation = -32049.623147 eV Core-core repulsion = 27416.840426 eV Total energy + Delta-G solvation = -4632.782721 eV No. of doubly occupied orbitals = 69 Molecular weight (most abundant/longest-lived isotopes) = 390.113 amu Computer time = 0.86 seconds Orbital eigenvalues (eV) -41.26816 -39.98268 -38.01568 -37.66024 -37.34978 -34.83585 -33.85168 -33.08362 -32.54632 -31.43857 -30.45926 -29.86979 -29.25840 -27.04462 -26.67141 -25.17536 -23.24559 -22.75827 -22.03173 -21.93824 -20.41563 -19.29762 -18.60189 -18.01735 -17.40769 -17.09480 -16.86010 -15.91721 -15.83719 -15.70328 -15.36615 -15.21102 -15.09129 -14.55622 -14.43988 -14.39232 -14.36398 -14.07925 -13.73852 -13.51635 -13.37404 -13.04011 -12.87627 -12.72622 -12.44568 -12.21057 -12.15110 -11.73619 -11.67520 -11.53779 -11.43703 -11.20247 -11.06304 -10.98998 -10.70980 -10.51002 -10.36184 -10.15576 -9.99627 -9.98105 -9.75026 -9.65045 -8.45475 -8.08166 -7.99658 -7.79207 -7.68817 -6.84364 -5.41450 0.10080 0.66043 1.55113 1.64589 1.83567 1.85178 1.93848 2.33475 2.59033 2.83394 3.36003 3.67583 3.81798 3.91250 4.05479 4.21148 4.27941 4.42772 4.45359 4.76958 4.84752 4.85699 5.06224 5.11351 5.26161 5.32164 5.44396 5.55743 5.57262 5.58835 5.60312 5.76910 5.83767 5.94959 5.98280 6.02789 6.15785 6.20735 6.52072 6.57150 6.58548 6.63224 6.67756 6.82574 7.00718 7.12686 7.26634 7.30389 7.44614 7.67837 7.94027 7.97145 8.08364 9.22407 10.34669 Molecular weight = 390.11amu Principal moments of inertia in cm(-1) A = 0.013359 B = 0.001709 C = 0.001583 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 2095.537046 B =16376.974933 C =17681.806718 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.159 4.159 2 C 0.124 3.876 3 N -0.762 5.762 4 C 0.609 3.391 5 O -0.642 6.642 6 C -1.081 5.081 7 S 1.463 4.537 8 O -0.934 6.934 9 C -0.390 4.390 10 C -0.072 4.072 11 C -0.124 4.124 12 C -0.136 4.136 13 C 0.115 3.885 14 N -0.664 5.664 15 C 0.557 3.443 16 O -0.500 6.500 17 C -0.180 4.180 18 C 0.016 3.984 19 C -0.181 4.181 20 C -0.077 4.077 21 O -0.534 6.534 22 Si 0.946 3.054 23 H -0.246 1.246 24 H -0.248 1.248 25 H -0.249 1.249 26 C 0.116 3.884 27 N -0.479 5.479 28 C 0.139 3.861 29 C -0.057 4.057 30 H 0.061 0.939 31 H 0.054 0.946 32 H 0.055 0.945 33 H 0.050 0.950 34 H 0.048 0.952 35 H 0.382 0.618 36 H 0.102 0.898 37 H 0.123 0.877 38 H 0.118 0.882 39 H 0.118 0.882 40 H 0.405 0.595 41 H 0.158 0.842 42 H 0.125 0.875 43 H 0.376 0.624 44 H 0.155 0.845 45 H 0.162 0.838 46 H 0.137 0.863 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 12.557 17.534 -13.269 25.322 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.217 4.217 2 C -0.002 4.002 3 N -0.415 5.415 4 C 0.418 3.582 5 O -0.536 6.536 6 C -1.213 5.213 7 S 1.664 4.336 8 O -0.930 6.930 9 C -0.482 4.482 10 C -0.091 4.091 11 C -0.144 4.144 12 C -0.156 4.156 13 C 0.022 3.978 14 N -0.309 5.309 15 C 0.344 3.656 16 O -0.374 6.374 17 C -0.185 4.185 18 C -0.010 4.010 19 C -0.183 4.183 20 C -0.188 4.188 21 O -0.338 6.338 22 Si 0.768 3.232 23 H -0.169 1.169 24 H -0.172 1.172 25 H -0.172 1.172 26 C -0.040 4.040 27 N -0.187 5.187 28 C -0.020 4.020 29 C -0.078 4.078 30 H 0.080 0.920 31 H 0.073 0.927 32 H 0.074 0.926 33 H 0.068 0.932 34 H 0.066 0.934 35 H 0.213 0.787 36 H 0.120 0.880 37 H 0.141 0.859 38 H 0.136 0.864 39 H 0.135 0.865 40 H 0.241 0.759 41 H 0.176 0.824 42 H 0.143 0.857 43 H 0.223 0.777 44 H 0.172 0.828 45 H 0.179 0.821 46 H 0.155 0.845 Dipole moment (debyes) X Y Z Total from point charges 14.683 16.167 -13.384 25.614 hybrid contribution -3.201 1.759 1.650 4.008 sum 11.481 17.926 -11.734 24.307 Atomic orbital electron populations 1.21976 0.96262 1.01754 1.01696 1.20899 0.92282 0.86236 1.00741 1.45817 1.08130 1.05485 1.82083 1.15178 0.80227 0.88236 0.74609 1.90602 1.54919 1.47573 1.60500 1.26599 1.20068 1.00640 1.74032 1.66906 0.85168 0.75693 1.05791 1.94471 1.83880 1.77887 1.36769 1.28856 0.96465 1.23951 0.98889 1.21289 0.98349 0.93319 0.96154 1.21013 0.97811 0.95026 1.00520 1.20705 0.93922 0.98676 1.02337 1.17702 0.88746 0.92203 0.99138 1.43260 1.32709 1.26121 1.28796 1.18049 0.83196 0.84429 0.79950 1.90876 1.62961 1.24332 1.59212 1.21044 0.98669 0.99188 0.99586 1.21684 0.90888 0.97619 0.90808 1.21362 0.98597 0.97987 1.00373 1.24964 1.01636 1.08381 0.83818 1.86568 1.68603 1.33068 1.45588 0.85745 0.76502 0.79033 0.81907 1.16940 1.17186 1.17241 1.22853 0.97951 0.92140 0.91105 1.67703 1.08506 1.31481 1.10981 1.23062 0.90945 0.90606 0.97398 1.20712 0.98103 0.91710 0.97248 0.91964 0.92738 0.92632 0.93166 0.93371 0.78659 0.88014 0.85934 0.86440 0.86450 0.75881 0.82432 0.85721 0.77653 0.82806 0.82070 0.84511 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 17. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.16 -2.39 10.03 37.16 0.37 -2.02 16 2 C 0.12 2.55 6.39 -4.04 -0.03 2.53 16 3 N -0.76 -18.66 5.54 -63.63 -0.35 -19.01 16 4 C 0.61 18.22 7.50 -15.52 -0.12 18.11 16 5 O -0.64 -21.09 16.28 5.05 0.08 -21.01 16 6 C -1.08 -31.27 8.32 31.47 0.26 -31.01 16 7 S 1.46 39.57 12.78 -107.50 -1.37 38.19 16 8 O -0.93 -31.80 18.25 -35.23 -0.64 -32.44 16 9 C -0.39 -9.03 5.67 -39.61 -0.22 -9.25 16 10 C -0.07 -1.58 8.93 -39.55 -0.35 -1.93 16 11 C -0.12 -2.17 10.04 -39.61 -0.40 -2.57 16 12 C -0.14 -2.08 9.96 -39.39 -0.39 -2.48 16 13 C 0.12 1.90 6.28 -83.72 -0.53 1.37 16 14 N -0.66 -8.11 5.29 -10.73 -0.06 -8.17 16 15 C 0.56 7.31 7.52 -12.34 -0.09 7.22 16 16 O -0.50 -8.42 14.10 5.31 0.07 -8.34 16 17 C -0.18 -1.81 5.89 -104.82 -0.62 -2.42 16 18 C 0.02 0.15 9.38 -38.86 -0.36 -0.21 16 19 C -0.18 -1.33 5.35 -104.54 -0.56 -1.89 16 20 C -0.08 -0.43 2.82 36.01 0.10 -0.33 16 21 O -0.53 -3.44 12.84 -35.23 -0.45 -3.89 16 22 Si 0.95 4.29 25.16 -169.99 -4.28 0.01 16 23 H -0.25 -1.26 7.11 56.52 0.40 -0.85 16 24 H -0.25 -1.41 7.11 56.52 0.40 -1.01 16 25 H -0.25 -1.07 7.04 56.52 0.40 -0.67 16 26 C 0.12 0.87 9.84 -17.48 -0.17 0.70 16 27 N -0.48 -4.29 10.35 -12.91 -0.13 -4.42 16 28 C 0.14 1.16 10.71 -17.12 -0.18 0.97 16 29 C -0.06 -1.13 8.35 -39.39 -0.33 -1.46 16 30 H 0.06 0.79 8.14 -51.93 -0.42 0.36 16 31 H 0.05 0.79 8.14 -51.93 -0.42 0.37 16 32 H 0.05 0.78 8.14 -51.93 -0.42 0.35 16 33 H 0.05 1.05 8.14 -51.93 -0.42 0.62 16 34 H 0.05 1.06 8.14 -51.93 -0.42 0.63 16 35 H 0.38 8.38 8.42 -40.82 -0.34 8.03 16 36 H 0.10 2.82 6.09 -45.47 -0.28 2.54 16 37 H 0.12 2.87 6.48 -52.49 -0.34 2.53 16 38 H 0.12 1.70 8.06 -52.48 -0.42 1.27 16 39 H 0.12 1.33 8.06 -52.49 -0.42 0.91 16 40 H 0.40 3.27 6.90 -40.82 -0.28 2.99 16 41 H 0.16 1.55 7.74 -52.49 -0.41 1.14 16 42 H 0.13 0.62 7.96 -51.93 -0.41 0.21 16 43 H 0.38 1.15 8.70 45.56 0.40 1.54 16 44 H 0.16 0.82 4.87 -52.49 -0.26 0.57 16 45 H 0.16 0.89 6.44 -52.48 -0.34 0.55 16 46 H 0.14 2.63 6.42 -52.49 -0.34 2.29 16 LS Contribution 401.67 15.07 6.05 6.05 Total: -1.00 -44.27 401.67 -9.05 -53.32 By element: Atomic # 1 Polarization: 28.74 SS G_CDS: -4.35 Total: 24.39 kcal Atomic # 6 Polarization: -21.06 SS G_CDS: -3.62 Total: -24.68 kcal Atomic # 7 Polarization: -31.05 SS G_CDS: -0.54 Total: -31.60 kcal Atomic # 8 Polarization: -64.75 SS G_CDS: -0.94 Total: -65.69 kcal Atomic # 14 Polarization: 4.29 SS G_CDS: -4.28 Total: 0.01 kcal Atomic # 16 Polarization: 39.57 SS G_CDS: -1.37 Total: 38.19 kcal Total LS contribution 6.05 Total: 6.05 kcal Total: -44.27 -9.05 -53.32 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9704022_13287814.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -58.711 kcal (2) G-P(sol) polarization free energy of solvation -44.266 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -102.978 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.053 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -53.319 kcal (6) G-S(sol) free energy of system = (1) + (5) -112.031 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.86 seconds