Wall clock time and date at job start Tue Mar 9 2021 13:26:10 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52993 * 1 3 3 N 1.46503 * 109.47106 * 2 1 4 4 C 1.34777 * 119.99967 * 179.97438 * 3 2 1 5 5 O 1.21860 * 120.00127 * 0.02562 * 4 3 2 6 6 C 1.40191 * 119.99908 * 180.02562 * 4 3 2 7 7 S 1.55353 * 120.00296 * 180.02562 * 6 4 3 8 8 O 1.52195 * 102.99731 * 286.87404 * 7 6 4 9 9 C 1.76195 * 103.00357 * 180.02562 * 7 6 4 10 10 C 1.38263 * 119.96283 * 29.97111 * 9 7 6 11 11 C 1.38308 * 120.14030 * 180.02562 * 10 9 7 12 12 C 1.38085 * 120.07189 * 359.72190 * 11 10 9 13 13 C 1.38902 * 119.92812 * 0.55983 * 12 11 10 14 14 N 1.39869 * 120.07204 * 179.71985 * 13 12 11 15 15 C 1.34770 * 119.99942 * 214.81896 * 14 13 12 16 16 O 1.21663 * 119.99962 * 355.37566 * 15 14 13 17 17 C 1.47025 * 120.00077 * 175.37347 * 15 14 13 18 18 C 1.36241 * 123.49433 * 179.97438 * 17 15 14 19 19 Cl 1.73594 * 124.60944 * 359.97438 * 18 17 15 20 20 S 1.70453 * 110.78525 * 180.02562 * 18 17 15 21 21 C 1.75497 * 92.46914 * 359.97438 * 20 18 17 22 22 C 1.50699 * 124.68372 * 180.02562 * 21 20 18 23 23 O 1.42893 * 109.47197 * 245.02383 * 22 21 20 24 24 Si 1.86306 * 109.46908 * 5.02417 * 22 21 20 25 25 H 1.48504 * 109.46906 * 60.00214 * 24 22 21 26 26 H 1.48504 * 109.46690 * 180.02562 * 24 22 21 27 27 H 1.48497 * 109.46851 * 299.99926 * 24 22 21 28 28 C 1.32693 * 110.62841 * 0.26663 * 21 20 18 29 29 C 1.38128 * 119.96458 * 210.00128 * 9 7 6 30 30 H 1.09003 * 109.47448 * 180.02562 * 1 2 3 31 31 H 1.09002 * 109.47258 * 300.00189 * 1 2 3 32 32 H 1.08998 * 109.47407 * 59.99945 * 1 2 3 33 33 H 1.09001 * 109.47109 * 240.00582 * 2 1 3 34 34 H 1.08998 * 109.47407 * 120.00055 * 2 1 3 35 35 H 0.96996 * 119.99752 * 0.02562 * 3 2 1 36 36 H 1.08001 * 120.00210 * 359.97438 * 6 4 3 37 37 H 1.07997 * 119.92743 * 0.02562 * 10 9 7 38 38 H 1.08003 * 119.95803 * 180.02562 * 11 10 9 39 39 H 1.08006 * 120.03604 * 180.27793 * 12 11 10 40 40 H 0.97004 * 120.00125 * 34.81284 * 14 13 12 41 41 H 1.08998 * 109.46841 * 125.02603 * 22 21 20 42 42 H 0.96705 * 114.00091 * 59.99520 * 23 22 21 43 43 H 1.08002 * 123.44430 * 179.73472 * 28 21 20 44 44 H 1.07999 * 120.03710 * 359.97438 * 29 9 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5299 0.0000 0.0000 3 7 2.0183 1.3812 0.0000 4 6 3.3433 1.6275 0.0005 5 8 4.1352 0.7013 0.0005 6 6 3.8106 2.9493 0.0011 7 16 5.3380 3.2332 0.0011 8 8 5.7533 2.8720 1.4200 9 6 5.4140 4.9935 0.0026 10 6 4.4071 5.7277 0.6018 11 6 4.4628 7.1096 0.6047 12 6 5.5277 7.7605 0.0138 13 6 6.5378 7.0260 -0.5942 14 7 7.6148 7.6823 -1.1988 15 6 8.1775 7.1702 -2.3112 16 8 7.8050 6.0950 -2.7416 17 6 9.2416 7.9109 -3.0046 18 6 9.8591 7.4604 -4.1324 19 17 9.4950 5.9584 -4.9229 20 16 11.0388 8.5715 -4.6610 21 6 10.7012 9.6750 -3.3388 22 6 11.4045 10.9893 -3.1179 23 8 12.1490 10.9323 -1.8996 24 14 12.5632 11.3200 -4.5389 25 1 11.7893 11.3793 -5.8050 26 1 13.2567 12.6149 -4.3209 27 1 13.5673 10.2292 -4.6229 28 6 9.7446 9.1897 -2.5575 29 6 6.4790 5.6387 -0.5954 30 1 -0.3634 -1.0277 0.0005 31 1 -0.3634 0.5139 0.8900 32 1 -0.3634 0.5138 -0.8899 33 1 1.8933 -0.5137 -0.8900 34 1 1.8933 -0.5138 0.8899 35 1 1.3879 2.1185 0.0004 36 1 3.1088 3.7702 0.0006 37 1 3.5755 5.2209 1.0686 38 1 3.6749 7.6801 1.0740 39 1 5.5728 8.8396 0.0203 40 1 7.9568 8.5061 -0.8175 41 1 10.6674 11.7899 -3.0561 42 1 12.8248 10.2408 -1.8836 43 1 9.3777 9.6997 -1.6790 44 1 7.2650 5.0647 -1.0633 RHF calculation, no. of doubly occupied orbitals= 70 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_9704022_13431040.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:26:10 Heat of formation + Delta-G solvation = -121.993130 kcal Electronic energy + Delta-G solvation = -32738.763427 eV Core-core repulsion = 27900.327061 eV Total energy + Delta-G solvation = -4838.436366 eV No. of doubly occupied orbitals = 70 Molecular weight (most abundant/longest-lived isotopes) = 429.035 amu Computer time = 0.83 seconds Orbital eigenvalues (eV) -40.53872 -38.70520 -37.88308 -37.63574 -37.11964 -36.30646 -34.60653 -33.83189 -31.40208 -31.11426 -30.38574 -29.86429 -29.34096 -27.03338 -26.32142 -25.12354 -22.73742 -21.95954 -21.90418 -21.24229 -19.78865 -19.23372 -18.69130 -17.95864 -17.43043 -16.65142 -16.07196 -15.87816 -15.68047 -15.46115 -15.32551 -15.06702 -14.94234 -14.42855 -14.40578 -14.26756 -14.02236 -13.98988 -13.59848 -13.40040 -13.30903 -12.92525 -12.68351 -12.40385 -12.39058 -12.14179 -12.00952 -11.86812 -11.74470 -11.64635 -11.48527 -11.25844 -11.20440 -11.10225 -11.00889 -10.94023 -10.67132 -10.25919 -10.15256 -9.91210 -9.64108 -9.23320 -9.04857 -8.39184 -8.03523 -7.96208 -7.72453 -7.66745 -6.79968 -5.37687 0.08139 0.43324 1.04064 1.33632 1.47480 1.76422 1.77970 1.79728 1.89497 1.95825 2.26607 3.06504 3.15097 3.75548 3.86893 4.04821 4.26911 4.55080 4.58786 4.87885 4.89730 5.08379 5.10123 5.31921 5.34908 5.39282 5.50102 5.57270 5.60111 5.61743 5.84587 5.85837 6.03496 6.12082 6.21868 6.23492 6.54132 6.58849 6.65542 6.70802 6.75470 6.88515 6.88531 7.19292 7.42175 7.52987 7.70988 7.96453 8.10879 8.12250 9.24830 10.37284 Molecular weight = 429.03amu Principal moments of inertia in cm(-1) A = 0.014193 B = 0.001539 C = 0.001444 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1972.328287 B =18193.628484 C =19385.037085 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.159 4.159 2 C 0.124 3.876 3 N -0.762 5.762 4 C 0.609 3.391 5 O -0.643 6.643 6 C -1.081 5.081 7 S 1.463 4.537 8 O -0.935 6.935 9 C -0.392 4.392 10 C -0.073 4.073 11 C -0.126 4.126 12 C -0.136 4.136 13 C 0.116 3.884 14 N -0.662 5.662 15 C 0.569 3.431 16 O -0.491 6.491 17 C -0.153 4.153 18 C -0.108 4.108 19 Cl 0.033 6.967 20 S 0.210 5.790 21 C -0.239 4.239 22 C -0.036 4.036 23 O -0.532 6.532 24 Si 0.887 3.113 25 H -0.231 1.231 26 H -0.224 1.224 27 H -0.230 1.230 28 C -0.064 4.064 29 C -0.056 4.056 30 H 0.061 0.939 31 H 0.053 0.947 32 H 0.055 0.945 33 H 0.050 0.950 34 H 0.048 0.952 35 H 0.382 0.618 36 H 0.101 0.899 37 H 0.122 0.878 38 H 0.116 0.884 39 H 0.116 0.884 40 H 0.405 0.595 41 H 0.130 0.870 42 H 0.380 0.620 43 H 0.160 0.840 44 H 0.142 0.858 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 14.345 21.776 -13.654 29.435 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.217 4.217 2 C -0.001 4.001 3 N -0.415 5.415 4 C 0.417 3.583 5 O -0.536 6.536 6 C -1.213 5.213 7 S 1.664 4.336 8 O -0.931 6.931 9 C -0.483 4.483 10 C -0.092 4.092 11 C -0.145 4.145 12 C -0.157 4.157 13 C 0.023 3.977 14 N -0.307 5.307 15 C 0.355 3.645 16 O -0.366 6.366 17 C -0.171 4.171 18 C -0.255 4.255 19 Cl 0.062 6.938 20 S 0.474 5.526 21 C -0.356 4.356 22 C -0.150 4.150 23 O -0.337 6.337 24 Si 0.706 3.294 25 H -0.153 1.153 26 H -0.147 1.147 27 H -0.153 1.153 28 C -0.094 4.094 29 C -0.077 4.077 30 H 0.080 0.920 31 H 0.073 0.927 32 H 0.074 0.926 33 H 0.068 0.932 34 H 0.066 0.934 35 H 0.213 0.787 36 H 0.120 0.880 37 H 0.140 0.860 38 H 0.134 0.866 39 H 0.134 0.866 40 H 0.241 0.759 41 H 0.148 0.852 42 H 0.227 0.773 43 H 0.177 0.823 44 H 0.160 0.840 Dipole moment (debyes) X Y Z Total from point charges 16.494 20.325 -15.817 30.583 hybrid contribution -3.470 1.309 3.146 4.864 sum 13.023 21.634 -12.671 28.252 Atomic orbital electron populations 1.21974 0.96276 1.01739 1.01693 1.20893 0.92265 0.86261 1.00724 1.45820 1.08137 1.05462 1.82119 1.15180 0.80207 0.88246 0.74625 1.90601 1.54917 1.47581 1.60532 1.26611 1.20111 1.00605 1.73982 1.66906 0.85070 0.75775 1.05840 1.94467 1.83835 1.77934 1.36834 1.28847 0.96588 1.23852 0.99052 1.21276 0.98361 0.93318 0.96229 1.20993 0.97811 0.95013 1.00719 1.20705 0.94003 0.98623 1.02328 1.17716 0.88725 0.92162 0.99127 1.43160 1.32917 1.27831 1.26824 1.17423 0.81546 0.85429 0.80152 1.90917 1.60886 1.19763 1.65003 1.20239 1.02059 0.97161 0.97653 1.25357 1.03469 0.97023 0.99645 1.98454 1.93000 1.25297 1.77017 1.83258 1.33757 1.08543 1.26997 1.24723 1.05960 1.03173 1.01712 1.24363 0.99799 0.94053 0.96745 1.86543 1.52472 1.58871 1.35825 0.86360 0.80779 0.84547 0.77670 1.15348 1.14657 1.15300 1.21047 0.95282 0.93004 1.00059 1.20872 0.98133 0.91857 0.96884 0.91975 0.92744 0.92634 0.93190 0.93384 0.78671 0.88044 0.86045 0.86553 0.86565 0.75935 0.85235 0.77266 0.82276 0.83993 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 17. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.16 -2.42 10.03 37.15 0.37 -2.05 16 2 C 0.12 2.59 6.39 -4.04 -0.03 2.56 16 3 N -0.76 -18.89 5.54 -63.64 -0.35 -19.24 16 4 C 0.61 18.43 7.50 -15.53 -0.12 18.32 16 5 O -0.64 -21.35 16.28 5.05 0.08 -21.26 16 6 C -1.08 -31.72 8.32 31.47 0.26 -31.46 16 7 S 1.46 40.31 12.78 -107.50 -1.37 38.94 16 8 O -0.94 -32.26 18.25 -35.23 -0.64 -32.91 16 9 C -0.39 -9.27 5.67 -39.61 -0.22 -9.50 16 10 C -0.07 -1.63 8.93 -39.55 -0.35 -1.98 16 11 C -0.13 -2.26 10.04 -39.61 -0.40 -2.66 16 12 C -0.14 -2.16 9.97 -39.39 -0.39 -2.55 16 13 C 0.12 1.98 6.30 -83.71 -0.53 1.45 16 14 N -0.66 -8.64 5.31 -10.95 -0.06 -8.69 16 15 C 0.57 8.01 7.63 -12.70 -0.10 7.92 16 16 O -0.49 -8.63 12.34 5.22 0.06 -8.56 16 17 C -0.15 -1.65 5.98 -104.59 -0.63 -2.28 16 18 C -0.11 -1.14 6.87 30.01 0.21 -0.93 16 19 Cl 0.03 0.40 27.20 -51.86 -1.41 -1.01 16 20 S 0.21 1.51 20.19 -107.50 -2.17 -0.66 16 21 C -0.24 -1.50 5.65 -36.20 -0.20 -1.71 16 22 C -0.04 -0.16 2.94 36.01 0.11 -0.05 16 23 O -0.53 -2.67 12.88 -35.23 -0.45 -3.12 16 24 Si 0.89 3.66 26.20 -169.99 -4.45 -0.80 16 25 H -0.23 -1.08 7.11 56.52 0.40 -0.67 16 26 H -0.22 -1.05 7.11 56.52 0.40 -0.65 16 27 H -0.23 -0.98 7.11 56.52 0.40 -0.58 16 28 C -0.06 -0.48 9.75 -39.00 -0.38 -0.86 16 29 C -0.06 -1.16 8.40 -39.39 -0.33 -1.49 16 30 H 0.06 0.80 8.14 -51.93 -0.42 0.37 16 31 H 0.05 0.80 8.14 -51.93 -0.42 0.38 16 32 H 0.05 0.79 8.14 -51.93 -0.42 0.36 16 33 H 0.05 1.06 8.14 -51.93 -0.42 0.63 16 34 H 0.05 1.07 8.14 -51.93 -0.42 0.64 16 35 H 0.38 8.49 8.42 -40.82 -0.34 8.14 16 36 H 0.10 2.85 6.09 -45.46 -0.28 2.58 16 37 H 0.12 2.90 6.49 -52.49 -0.34 2.56 16 38 H 0.12 1.73 8.06 -52.48 -0.42 1.31 16 39 H 0.12 1.39 8.06 -52.48 -0.42 0.96 16 40 H 0.40 3.67 7.38 -40.82 -0.30 3.37 16 41 H 0.13 0.41 7.96 -51.93 -0.41 -0.01 16 42 H 0.38 0.79 8.70 45.56 0.40 1.19 16 43 H 0.16 0.86 7.10 -52.49 -0.37 0.48 16 44 H 0.14 2.85 6.22 -52.49 -0.33 2.52 16 LS Contribution 413.85 15.07 6.24 6.24 Total: -1.00 -43.76 413.85 -11.00 -54.75 By element: Atomic # 1 Polarization: 27.34 SS G_CDS: -3.73 Total: 23.60 kcal Atomic # 6 Polarization: -24.54 SS G_CDS: -2.73 Total: -27.27 kcal Atomic # 7 Polarization: -27.53 SS G_CDS: -0.41 Total: -27.94 kcal Atomic # 8 Polarization: -64.91 SS G_CDS: -0.95 Total: -65.86 kcal Atomic # 14 Polarization: 3.66 SS G_CDS: -4.45 Total: -0.80 kcal Atomic # 16 Polarization: 41.82 SS G_CDS: -3.54 Total: 38.28 kcal Atomic # 17 Polarization: 0.40 SS G_CDS: -1.41 Total: -1.01 kcal Total LS contribution 6.24 Total: 6.24 kcal Total: -43.76 -11.00 -54.75 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9704022_13431040.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -67.241 kcal (2) G-P(sol) polarization free energy of solvation -43.755 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -110.997 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.996 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -54.752 kcal (6) G-S(sol) free energy of system = (1) + (5) -121.993 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.83 seconds