Wall clock time and date at job start Tue Mar 9 2021 13:28:40 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52999 * 1 3 3 N 1.46503 * 109.47089 * 2 1 4 4 C 1.34783 * 119.99857 * 179.97438 * 3 2 1 5 5 O 1.21859 * 119.99715 * 0.02562 * 4 3 2 6 6 C 1.40192 * 119.99795 * 180.02562 * 4 3 2 7 7 S 1.55351 * 119.99907 * 179.97438 * 6 4 3 8 8 O 1.52198 * 103.00192 * 286.87643 * 7 6 4 9 9 C 1.76195 * 103.00266 * 179.97438 * 7 6 4 10 10 C 1.38269 * 119.96065 * 29.97827 * 9 7 6 11 11 C 1.38308 * 120.13881 * 180.02562 * 10 9 7 12 12 C 1.38091 * 120.06967 * 359.96039 * 11 10 9 13 13 C 1.38896 * 119.93140 * 0.06376 * 12 11 10 14 14 N 1.39918 * 120.06915 * 179.97438 * 13 12 11 15 15 C 1.34777 * 119.99961 * 213.22839 * 14 13 12 16 16 O 1.21291 * 120.00023 * 5.27537 * 15 14 13 17 17 C 1.50707 * 119.99925 * 185.27373 * 15 14 13 18 18 O 1.42900 * 109.46724 * 179.97438 * 17 15 14 19 19 C 1.35922 * 116.99959 * 180.02562 * 18 17 15 20 20 C 1.38676 * 120.05692 * 359.72786 * 19 18 17 21 21 C 1.38183 * 119.95199 * 179.72023 * 20 19 18 22 22 C 1.38231 * 120.07413 * 0.53512 * 21 20 19 23 23 C 1.50700 * 119.94425 * 179.74386 * 22 21 20 24 24 O 1.42905 * 109.46981 * 120.01760 * 23 22 21 25 25 Si 1.86304 * 109.47016 * 0.02562 * 23 22 21 26 26 H 1.48493 * 109.47081 * 59.99899 * 25 23 22 27 27 H 1.48498 * 109.46865 * 180.02562 * 25 23 22 28 28 H 1.48500 * 109.46785 * 299.99859 * 25 23 22 29 29 C 1.38289 * 120.11675 * 359.76085 * 22 21 20 30 30 C 1.38188 * 120.04691 * 359.96165 * 29 22 21 31 31 Br 1.89098 * 120.04007 * 179.97438 * 30 29 22 32 32 C 1.38125 * 119.96790 * 210.00316 * 9 7 6 33 33 H 1.09003 * 109.46895 * 299.99884 * 1 2 3 34 34 H 1.09000 * 109.47113 * 59.99779 * 1 2 3 35 35 H 1.08995 * 109.47230 * 179.97438 * 1 2 3 36 36 H 1.08998 * 109.47422 * 240.00592 * 2 1 3 37 37 H 1.09000 * 109.47113 * 120.00220 * 2 1 3 38 38 H 0.96994 * 120.00244 * 0.02562 * 3 2 1 39 39 H 1.08000 * 120.00176 * 359.97438 * 6 4 3 40 40 H 1.07996 * 119.93218 * 0.02562 * 10 9 7 41 41 H 1.07991 * 119.96419 * 179.97438 * 11 10 9 42 42 H 1.08000 * 120.03557 * 179.97438 * 12 11 10 43 43 H 0.97003 * 120.00571 * 33.23300 * 14 13 12 44 44 H 1.08998 * 109.47172 * 299.99820 * 17 15 14 45 45 H 1.09000 * 109.46657 * 60.00570 * 17 15 14 46 46 H 1.08004 * 120.02244 * 0.02562 * 20 19 18 47 47 H 1.08002 * 119.96568 * 180.27784 * 21 20 19 48 48 H 1.08998 * 109.47547 * 240.01580 * 23 22 21 49 49 H 0.96701 * 114.00424 * 299.99836 * 24 23 22 50 50 H 1.07999 * 119.97807 * 179.97438 * 29 22 21 51 51 H 1.07995 * 120.03706 * 359.72071 * 32 9 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 7 2.0183 1.3812 0.0000 4 6 3.3435 1.6275 0.0005 5 8 4.1353 0.7012 0.0005 6 6 3.8108 2.9493 0.0011 7 16 5.3381 3.2331 0.0023 8 8 5.7524 2.8722 1.4216 9 6 5.4142 4.9934 0.0018 10 6 4.4068 5.7283 0.5993 11 6 4.4625 7.1102 0.6006 12 6 5.5255 7.7604 0.0055 13 6 6.5388 7.0251 -0.5960 14 7 7.6170 7.6810 -1.2003 15 6 8.2047 7.1484 -2.2900 16 8 7.7406 6.1525 -2.8036 17 6 9.4386 7.7903 -2.8702 18 8 9.8704 7.0467 -4.0115 19 6 10.9795 7.4953 -4.6566 20 6 11.6350 8.6304 -4.2040 21 6 12.7657 9.0812 -4.8581 22 6 13.2376 8.4082 -5.9695 23 6 14.4677 8.9057 -6.6840 24 8 15.4732 7.8905 -6.6643 25 14 15.1088 10.4312 -5.8279 26 1 15.4525 10.1019 -4.4213 27 1 16.3205 10.9217 -6.5324 28 1 14.0639 11.4861 -5.8482 29 6 12.5828 7.2794 -6.4270 30 6 11.4549 6.8210 -5.7733 31 35 10.5593 5.2778 -6.3996 32 6 6.4797 5.6378 -0.5958 33 1 -0.3633 0.5138 0.8900 34 1 -0.3633 0.5139 -0.8900 35 1 -0.3633 -1.0276 -0.0005 36 1 1.8934 -0.5137 -0.8900 37 1 1.8933 -0.5139 0.8900 38 1 1.3881 2.1185 0.0004 39 1 3.1090 3.7702 0.0006 40 1 3.5747 5.2221 1.0659 41 1 3.6739 7.6814 1.0677 42 1 5.5682 8.8396 0.0065 43 1 7.9415 8.5189 -0.8350 44 1 9.2100 8.8136 -3.1680 45 1 10.2305 7.7980 -2.1212 46 1 11.2648 9.1590 -3.3380 47 1 13.2789 9.9627 -4.5031 48 1 14.2155 9.1472 -7.7165 49 1 15.7472 7.6252 -5.7757 50 1 12.9533 6.7556 -7.2958 51 1 7.2683 5.0633 -1.0588 RHF calculation, no. of doubly occupied orbitals= 78 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_9704022_6201210.mol2 51 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:28:40 Heat of formation + Delta-G solvation = -190.141457 kcal Electronic energy + Delta-G solvation = -37977.935926 eV Core-core repulsion = 32593.154159 eV Total energy + Delta-G solvation = -5384.781767 eV No. of doubly occupied orbitals = 78 Molecular weight (most abundant/longest-lived isotopes) = 497.043 amu Computer time = 1.09 seconds Orbital eigenvalues (eV) -41.84298 -41.16303 -39.90836 -39.63163 -38.88077 -37.14963 -35.92038 -35.82944 -33.85846 -33.56744 -32.03160 -31.97919 -31.75711 -31.31463 -30.34504 -29.39616 -28.72196 -26.27631 -24.52990 -24.11022 -23.54313 -23.34570 -22.30926 -21.58692 -21.32884 -19.62019 -19.43196 -18.39272 -18.09264 -17.64302 -17.55460 -17.48143 -17.09987 -17.01843 -16.45034 -16.31221 -16.20989 -16.08630 -15.98277 -15.72703 -15.47960 -15.29186 -15.06924 -14.88847 -14.66425 -14.51872 -14.45324 -14.42245 -13.93750 -13.80173 -13.70559 -13.62106 -13.38686 -13.14630 -12.82348 -12.69765 -12.67351 -12.42045 -12.32435 -12.26409 -12.16871 -12.13395 -11.97685 -11.81008 -11.60794 -11.50660 -11.12928 -10.93962 -10.51796 -10.34188 -10.34114 -9.93739 -9.90317 -9.82170 -9.26202 -9.22028 -9.05378 -7.71356 -0.00721 0.13273 0.18330 0.34053 0.72623 1.26947 1.36229 1.47037 1.57292 1.60719 1.80297 2.01385 2.45421 2.48915 2.66937 2.76280 2.98228 3.30784 3.43389 3.55452 3.70418 3.80601 3.85078 3.94534 4.04576 4.10283 4.12558 4.14116 4.15979 4.17916 4.26482 4.36488 4.40645 4.48036 4.54908 4.62399 4.68237 4.71816 4.79209 4.87283 4.91528 5.00979 5.03862 5.12759 5.20001 5.26899 5.27297 5.35398 5.38697 5.53258 5.55319 5.78763 6.01267 6.01652 6.11375 6.40547 6.78310 7.08449 7.09451 8.03732 Molecular weight = 497.04amu Principal moments of inertia in cm(-1) A = 0.008564 B = 0.001121 C = 0.001024 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 3268.583168 B =24966.526721 C =27327.040421 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.143 4.143 2 C 0.116 3.884 3 N -0.754 5.754 4 C 0.586 3.414 5 O -0.681 6.681 6 C -1.090 5.090 7 S 1.472 4.528 8 O -1.018 7.018 9 C -0.418 4.418 10 C -0.107 4.107 11 C -0.115 4.115 12 C -0.109 4.109 13 C 0.131 3.869 14 N -0.646 5.646 15 C 0.503 3.497 16 O -0.540 6.540 17 C 0.043 3.957 18 O -0.306 6.306 19 C 0.147 3.853 20 C -0.190 4.190 21 C -0.067 4.067 22 C -0.152 4.152 23 C -0.081 4.081 24 O -0.555 6.555 25 Si 0.986 3.014 26 H -0.245 1.245 27 H -0.277 1.277 28 H -0.247 1.247 29 C -0.030 4.030 30 C -0.144 4.144 31 Br -0.055 7.055 32 C -0.074 4.074 33 H 0.061 0.939 34 H 0.069 0.931 35 H 0.093 0.907 36 H 0.044 0.956 37 H 0.029 0.971 38 H 0.395 0.605 39 H 0.105 0.895 40 H 0.092 0.908 41 H 0.155 0.845 42 H 0.180 0.820 43 H 0.436 0.564 44 H 0.143 0.857 45 H 0.138 0.862 46 H 0.178 0.822 47 H 0.154 0.846 48 H 0.124 0.876 49 H 0.389 0.611 50 H 0.143 0.857 51 H 0.131 0.869 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 19.439 27.410 -15.792 37.130 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.200 4.200 2 C -0.008 4.008 3 N -0.406 5.406 4 C 0.394 3.606 5 O -0.578 6.578 6 C -1.222 5.222 7 S 1.679 4.321 8 O -1.014 7.014 9 C -0.515 4.515 10 C -0.126 4.126 11 C -0.135 4.135 12 C -0.129 4.129 13 C 0.036 3.964 14 N -0.296 5.296 15 C 0.291 3.709 16 O -0.415 6.415 17 C -0.035 4.035 18 O -0.218 6.218 19 C 0.099 3.901 20 C -0.209 4.209 21 C -0.085 4.085 22 C -0.153 4.153 23 C -0.190 4.190 24 O -0.362 6.362 25 Si 0.809 3.191 26 H -0.169 1.169 27 H -0.202 1.202 28 H -0.171 1.171 29 C -0.050 4.050 30 C -0.224 4.224 31 Br 0.031 6.969 32 C -0.095 4.095 33 H 0.080 0.920 34 H 0.088 0.912 35 H 0.112 0.888 36 H 0.063 0.937 37 H 0.048 0.952 38 H 0.228 0.772 39 H 0.124 0.876 40 H 0.110 0.890 41 H 0.173 0.827 42 H 0.197 0.803 43 H 0.277 0.723 44 H 0.161 0.839 45 H 0.155 0.845 46 H 0.195 0.805 47 H 0.172 0.828 48 H 0.141 0.859 49 H 0.238 0.762 50 H 0.161 0.839 51 H 0.148 0.852 Dipole moment (debyes) X Y Z Total from point charges 20.141 25.473 -16.668 36.501 hybrid contribution -2.396 0.773 2.386 3.469 sum 17.744 26.246 -14.283 34.752 Atomic orbital electron populations 1.21884 0.91187 1.04194 1.02783 1.21167 0.96440 0.83658 0.99584 1.45653 1.06610 1.07826 1.80517 1.15555 0.82005 0.88180 0.74844 1.90554 1.56513 1.48524 1.62243 1.26828 1.20907 1.00784 1.73729 1.65909 0.84270 0.78548 1.03367 1.94351 1.84965 1.81768 1.40318 1.27869 0.99601 1.20691 1.03328 1.21201 0.97619 0.95929 0.97891 1.21364 0.99504 0.92822 0.99766 1.21288 0.91378 1.01432 0.98815 1.17709 0.90237 0.90742 0.97759 1.43007 1.31378 1.26966 1.28257 1.20959 0.85515 0.84558 0.79879 1.90860 1.64004 1.26594 1.60033 1.22764 0.94910 0.96901 0.88886 1.86261 1.41030 1.52677 1.41861 1.18836 0.86744 0.93299 0.91209 1.21538 0.98376 0.96664 1.04347 1.21250 0.95016 0.98948 0.93296 1.20409 0.99694 0.97075 0.98171 1.25139 0.86545 1.00484 1.06862 1.86492 1.56482 1.58410 1.34848 0.85183 0.79458 0.75319 0.79128 1.16852 1.20203 1.17096 1.20894 0.90631 0.95176 0.98270 1.21349 1.01662 0.98716 1.00649 1.96797 1.77869 1.34663 1.87602 1.20730 0.97113 0.94252 0.97453 0.91962 0.91160 0.88846 0.93750 0.95247 0.77179 0.87631 0.88970 0.82721 0.80313 0.72315 0.83938 0.84461 0.80477 0.82842 0.85856 0.76163 0.83896 0.85165 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 16. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.14 -4.05 10.03 71.98 0.72 -3.33 16 2 C 0.12 4.89 6.39 86.38 0.55 5.44 16 3 N -0.75 -38.26 5.54 -473.38 -2.62 -40.89 16 4 C 0.59 37.16 7.50 84.71 0.64 37.79 16 5 O -0.68 -47.79 16.28 -4.86 -0.08 -47.87 16 6 C -1.09 -67.36 8.32 68.29 0.57 -66.79 16 7 S 1.47 86.55 12.78 -56.49 -0.72 85.83 16 8 O -1.02 -74.85 18.25 -148.98 -2.72 -77.57 16 9 C -0.42 -20.26 5.68 22.25 0.13 -20.14 16 10 C -0.11 -4.77 8.93 22.29 0.20 -4.57 16 11 C -0.12 -3.64 10.04 22.25 0.22 -3.41 16 12 C -0.11 -2.70 9.96 22.39 0.22 -2.48 16 13 C 0.13 3.79 6.28 38.16 0.24 4.03 16 14 N -0.65 -11.49 5.34 -303.49 -1.62 -13.11 16 15 C 0.50 10.94 7.65 87.66 0.67 11.61 16 16 O -0.54 -18.81 14.19 15.97 0.23 -18.59 16 17 C 0.04 0.47 5.22 71.24 0.37 0.84 16 18 O -0.31 -6.18 9.01 -73.63 -0.66 -6.84 16 19 C 0.15 2.40 6.68 22.52 0.15 2.55 16 20 C -0.19 -1.55 9.04 22.36 0.20 -1.35 16 21 C -0.07 -0.47 8.66 22.26 0.19 -0.28 16 22 C -0.15 -1.48 5.39 -19.85 -0.11 -1.58 16 23 C -0.08 -0.56 2.82 71.24 0.20 -0.36 16 24 O -0.56 -5.09 12.77 -148.98 -1.90 -6.99 16 25 Si 0.99 4.61 25.07 68.60 1.72 6.33 16 26 H -0.25 -0.97 7.11 99.48 0.71 -0.27 16 27 H -0.28 -2.38 7.11 99.48 0.71 -1.67 16 28 H -0.25 -1.08 7.11 99.48 0.71 -0.37 16 29 C -0.03 -0.43 9.35 22.27 0.21 -0.22 16 30 C -0.14 -2.72 6.24 22.40 0.14 -2.58 16 31 Br -0.05 -1.31 33.16 -20.37 -0.68 -1.99 16 32 C -0.07 -2.98 8.35 22.39 0.19 -2.80 16 33 H 0.06 1.68 8.14 -2.39 -0.02 1.66 16 34 H 0.07 1.81 8.14 -2.39 -0.02 1.79 16 35 H 0.09 2.11 8.14 -2.39 -0.02 2.09 16 36 H 0.04 1.91 8.14 -2.39 -0.02 1.89 16 37 H 0.03 1.34 8.14 -2.39 -0.02 1.32 16 38 H 0.39 17.69 8.42 -92.71 -0.78 16.91 16 39 H 0.11 6.22 6.09 -7.38 -0.04 6.18 16 40 H 0.09 4.56 6.49 -2.91 -0.02 4.55 16 41 H 0.16 3.71 8.06 -2.92 -0.02 3.68 16 42 H 0.18 2.34 8.06 -2.91 -0.02 2.32 16 43 H 0.44 2.67 8.82 -92.71 -0.82 1.85 16 44 H 0.14 0.28 7.65 -2.39 -0.02 0.26 16 45 H 0.14 0.50 7.67 -2.39 -0.02 0.48 16 46 H 0.18 0.01 6.30 -2.91 -0.02 -0.01 16 47 H 0.15 0.29 4.87 -2.91 -0.01 0.28 16 48 H 0.12 0.70 7.96 -2.39 -0.02 0.68 16 49 H 0.39 1.15 8.70 -74.06 -0.64 0.50 16 50 H 0.14 1.99 8.06 -2.91 -0.02 1.97 16 51 H 0.13 5.33 6.42 -2.91 -0.02 5.32 16 Total: -1.00 -114.10 460.50 -3.81 -117.91 By element: Atomic # 1 Polarization: 51.86 SS G_CDS: -0.46 Total: 51.40 kcal Atomic # 6 Polarization: -53.33 SS G_CDS: 5.71 Total: -47.62 kcal Atomic # 7 Polarization: -49.75 SS G_CDS: -4.25 Total: -54.00 kcal Atomic # 8 Polarization: -152.73 SS G_CDS: -5.14 Total: -157.87 kcal Atomic # 14 Polarization: 4.61 SS G_CDS: 1.72 Total: 6.33 kcal Atomic # 16 Polarization: 86.55 SS G_CDS: -0.72 Total: 85.83 kcal Atomic # 35 Polarization: -1.31 SS G_CDS: -0.68 Total: -1.99 kcal Total: -114.10 -3.81 -117.91 kcal The number of atoms in the molecule is 51 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9704022_6201210.mol2 51 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -72.229 kcal (2) G-P(sol) polarization free energy of solvation -114.098 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -186.327 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -3.815 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -117.913 kcal (6) G-S(sol) free energy of system = (1) + (5) -190.141 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.09 seconds