Wall clock time and date at job start Tue Mar 9 2021 13:29:34 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52996 * 1 3 3 N 1.46507 * 109.47443 * 2 1 4 4 C 1.34772 * 120.00223 * 179.97438 * 3 2 1 5 5 O 1.21861 * 120.00013 * 359.97438 * 4 3 2 6 6 C 1.40192 * 119.99900 * 180.02562 * 4 3 2 7 7 S 1.55347 * 119.99896 * 180.02562 * 6 4 3 8 8 O 1.52204 * 102.99873 * 286.87042 * 7 6 4 9 9 C 1.76202 * 103.00129 * 179.97438 * 7 6 4 10 10 C 1.38260 * 119.95946 * 29.97557 * 9 7 6 11 11 C 1.38309 * 120.14174 * 180.02562 * 10 9 7 12 12 C 1.38092 * 120.07122 * 359.69964 * 11 10 9 13 13 C 1.38904 * 119.92483 * 0.57302 * 12 11 10 14 14 N 1.39864 * 120.07160 * 179.72623 * 13 12 11 15 15 C 1.34779 * 119.99902 * 214.82302 * 14 13 12 16 16 O 1.21629 * 120.00318 * 355.37379 * 15 14 13 17 17 C 1.47246 * 119.99884 * 175.37962 * 15 14 13 18 18 C 1.36782 * 126.94408 * 180.19098 * 17 15 14 19 19 C 1.50697 * 125.80289 * 359.95139 * 18 17 15 20 20 N 1.34670 * 108.39267 * 180.22757 * 18 17 15 21 21 C 1.36445 * 110.29678 * 359.75951 * 20 18 17 22 22 C 1.50701 * 125.56990 * 179.97438 * 21 20 18 23 23 O 1.42902 * 109.46743 * 300.01707 * 22 21 20 24 24 Si 1.86301 * 109.47299 * 180.02562 * 22 21 20 25 25 H 1.48495 * 109.47115 * 60.00044 * 24 22 21 26 26 H 1.48498 * 109.46982 * 179.97438 * 24 22 21 27 27 H 1.48499 * 109.46775 * 299.99580 * 24 22 21 28 28 C 1.34480 * 108.86366 * 359.97438 * 21 20 18 29 29 C 1.38124 * 119.96394 * 209.99755 * 9 7 6 30 30 H 1.08999 * 109.47445 * 179.97438 * 1 2 3 31 31 H 1.08996 * 109.47326 * 300.00033 * 1 2 3 32 32 H 1.09004 * 109.46593 * 59.99996 * 1 2 3 33 33 H 1.08996 * 109.47326 * 239.99967 * 2 1 3 34 34 H 1.09001 * 109.47096 * 120.00043 * 2 1 3 35 35 H 0.96999 * 119.99391 * 359.97438 * 3 2 1 36 36 H 1.08003 * 119.99832 * 359.97438 * 6 4 3 37 37 H 1.07998 * 119.93298 * 359.97438 * 10 9 7 38 38 H 1.08000 * 119.96692 * 179.97438 * 11 10 9 39 39 H 1.07995 * 120.03974 * 180.27567 * 12 11 10 40 40 H 0.96999 * 120.00342 * 34.82113 * 14 13 12 41 41 H 1.08998 * 109.47024 * 270.30001 * 19 18 17 42 42 H 1.09000 * 109.47317 * 30.30167 * 19 18 17 43 43 H 1.08998 * 109.47254 * 150.30066 * 19 18 17 44 44 H 0.96999 * 124.85151 * 179.73017 * 20 18 17 45 45 H 1.09003 * 109.47089 * 60.01126 * 22 21 20 46 46 H 0.96703 * 114.00129 * 299.99035 * 23 22 21 47 47 H 1.08000 * 126.83518 * 179.97438 * 28 21 20 48 48 H 1.07995 * 120.03925 * 0.02562 * 29 9 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 7 2.0184 1.3813 0.0000 4 6 3.3434 1.6275 0.0005 5 8 4.1353 0.7012 0.0015 6 6 3.8107 2.9492 0.0011 7 16 5.3381 3.2331 0.0011 8 8 5.7534 2.8719 1.4201 9 6 5.4141 4.9935 0.0011 10 6 4.4072 5.7281 0.5996 11 6 4.4629 7.1100 0.6013 12 6 5.5281 7.7604 0.0103 13 6 6.5383 7.0254 -0.5968 14 7 7.6157 7.6811 -1.2013 15 6 8.1788 7.1682 -2.3133 16 8 7.8063 6.0931 -2.7432 17 6 9.2449 7.9094 -3.0076 18 6 9.9081 7.5268 -4.1411 19 6 9.6745 6.2530 -4.9117 20 7 10.8094 8.4792 -4.4480 21 6 10.7535 9.4945 -3.5382 22 6 11.6113 10.7335 -3.5535 23 8 12.9877 10.3610 -3.4600 24 14 11.1619 11.8179 -2.1068 25 1 11.3888 11.0744 -0.8416 26 1 12.0076 13.0385 -2.1216 27 1 9.7315 12.2050 -2.2039 28 6 9.8079 9.2090 -2.6256 29 6 6.4792 5.6380 -0.5972 30 1 -0.3634 -1.0276 -0.0005 31 1 -0.3634 0.5138 0.8899 32 1 -0.3633 0.5139 -0.8900 33 1 1.8933 -0.5138 -0.8899 34 1 1.8933 -0.5138 0.8900 35 1 1.3880 2.1185 -0.0004 36 1 3.1089 3.7701 0.0006 37 1 3.5751 5.2218 1.0660 38 1 3.6746 7.6811 1.0692 39 1 5.5732 8.8394 0.0158 40 1 7.9577 8.5050 -0.8204 41 1 10.3207 5.4676 -4.5198 42 1 8.6322 5.9515 -4.8079 43 1 9.9016 6.4186 -5.9648 44 1 11.4125 8.4477 -5.2071 45 1 11.4449 11.2792 -4.4824 46 1 13.2088 9.8709 -2.6562 47 1 9.5231 9.8138 -1.7774 48 1 7.2650 5.0636 -1.0652 RHF calculation, no. of doubly occupied orbitals= 70 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_9704022_9865296.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:29:34 Heat of formation + Delta-G solvation = -156.189130 kcal Electronic energy + Delta-G solvation = -32945.678396 eV Core-core repulsion = 28283.669337 eV Total energy + Delta-G solvation = -4662.009059 eV No. of doubly occupied orbitals = 70 Molecular weight (most abundant/longest-lived isotopes) = 392.128 amu Computer time = 0.81 seconds Orbital eigenvalues (eV) -42.48733 -41.12260 -39.87947 -39.16907 -37.65412 -35.82066 -35.78982 -33.82171 -32.86415 -32.41942 -31.93958 -31.69211 -30.50781 -29.07735 -28.79219 -25.75451 -24.38821 -23.99086 -23.50410 -22.50829 -21.45627 -21.40981 -20.58446 -19.16875 -19.04205 -17.62254 -17.53716 -17.26214 -17.01180 -16.91699 -16.56737 -16.31164 -16.19775 -16.08714 -15.66245 -15.50425 -15.24509 -14.92100 -14.78044 -14.75147 -14.62478 -14.38699 -14.35809 -14.24066 -13.78142 -13.71684 -13.35927 -13.30172 -13.11631 -12.89222 -12.75012 -12.67247 -12.63884 -12.37870 -12.27797 -12.19174 -11.99768 -11.78952 -11.38427 -10.78497 -10.58070 -10.48183 -10.30735 -9.92431 -9.89420 -9.79570 -9.25972 -9.10883 -8.96604 -7.68276 0.14815 0.37537 0.78992 1.13851 1.27014 1.61325 1.64739 1.80414 1.96103 2.07859 2.42162 2.47725 2.72467 2.81655 3.01022 3.35359 3.54457 3.61411 3.91062 3.97784 4.06773 4.14739 4.16068 4.19920 4.24060 4.30127 4.40502 4.47911 4.49999 4.59295 4.60555 4.69406 4.74715 4.78789 4.85854 4.89098 5.01354 5.02872 5.14615 5.27379 5.29199 5.34275 5.41806 5.44021 5.57914 5.65702 5.81599 5.89167 6.03737 6.09097 6.49654 6.59381 6.67159 7.10906 7.27013 8.06384 Molecular weight = 392.13amu Principal moments of inertia in cm(-1) A = 0.016677 B = 0.001708 C = 0.001616 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1678.602808 B =16385.485114 C =17322.210797 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.143 4.143 2 C 0.116 3.884 3 N -0.754 5.754 4 C 0.587 3.413 5 O -0.681 6.681 6 C -1.092 5.092 7 S 1.478 4.522 8 O -1.019 7.019 9 C -0.417 4.417 10 C -0.108 4.108 11 C -0.115 4.115 12 C -0.116 4.116 13 C 0.130 3.870 14 N -0.656 5.656 15 C 0.582 3.418 16 O -0.558 6.558 17 C -0.258 4.258 18 C 0.123 3.877 19 C -0.099 4.099 20 N -0.521 5.521 21 C -0.007 4.007 22 C -0.056 4.056 23 O -0.553 6.553 24 Si 1.001 2.999 25 H -0.254 1.254 26 H -0.267 1.267 27 H -0.253 1.253 28 C -0.173 4.173 29 C -0.071 4.071 30 H 0.093 0.907 31 H 0.061 0.939 32 H 0.070 0.930 33 H 0.045 0.955 34 H 0.029 0.971 35 H 0.395 0.605 36 H 0.105 0.895 37 H 0.093 0.907 38 H 0.154 0.846 39 H 0.171 0.829 40 H 0.424 0.576 41 H 0.084 0.916 42 H 0.080 0.920 43 H 0.093 0.907 44 H 0.432 0.568 45 H 0.133 0.867 46 H 0.392 0.608 47 H 0.162 0.838 48 H 0.139 0.861 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 12.595 23.981 -13.804 30.402 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.201 4.201 2 C -0.009 4.009 3 N -0.406 5.406 4 C 0.395 3.605 5 O -0.578 6.578 6 C -1.224 5.224 7 S 1.685 4.315 8 O -1.015 7.015 9 C -0.514 4.514 10 C -0.127 4.127 11 C -0.134 4.134 12 C -0.136 4.136 13 C 0.035 3.965 14 N -0.302 5.302 15 C 0.374 3.626 16 O -0.437 6.437 17 C -0.268 4.268 18 C 0.002 3.998 19 C -0.156 4.156 20 N -0.118 5.118 21 C -0.117 4.117 22 C -0.166 4.166 23 O -0.360 6.360 24 Si 0.823 3.177 25 H -0.178 1.178 26 H -0.191 1.191 27 H -0.177 1.177 28 C -0.197 4.197 29 C -0.093 4.093 30 H 0.112 0.888 31 H 0.080 0.920 32 H 0.089 0.911 33 H 0.064 0.936 34 H 0.047 0.953 35 H 0.228 0.772 36 H 0.123 0.877 37 H 0.112 0.888 38 H 0.172 0.828 39 H 0.189 0.811 40 H 0.263 0.737 41 H 0.102 0.898 42 H 0.099 0.901 43 H 0.112 0.888 44 H 0.273 0.727 45 H 0.151 0.849 46 H 0.241 0.759 47 H 0.179 0.821 48 H 0.156 0.844 Dipole moment (debyes) X Y Z Total from point charges 13.495 22.857 -14.094 30.054 hybrid contribution -2.011 0.605 1.895 2.828 sum 11.484 23.462 -12.200 28.830 Atomic orbital electron populations 1.21884 0.91232 1.04185 1.02761 1.21171 0.96410 0.83671 0.99626 1.45656 1.06623 1.07818 1.80537 1.15536 0.81992 0.88152 0.74852 1.90552 1.56482 1.48490 1.62240 1.26857 1.20989 1.00801 1.73721 1.65837 0.84109 0.78257 1.03340 1.94350 1.84976 1.81710 1.40432 1.27922 0.99512 1.20762 1.03242 1.21183 0.97757 0.95734 0.98069 1.21318 0.99284 0.92982 0.99842 1.21264 0.91846 1.01168 0.99352 1.17822 0.89987 0.91050 0.97639 1.43082 1.31888 1.28246 1.26960 1.17907 0.81010 0.84466 0.79211 1.90780 1.63742 1.22543 1.66655 1.19821 1.05327 0.99692 1.01970 1.20531 0.91062 0.92619 0.95543 1.20632 1.04517 0.91155 0.99315 1.41499 1.30170 1.15503 1.24608 1.21001 1.02867 0.94046 0.93760 1.24856 0.82241 0.95610 1.13852 1.86468 1.23114 1.78150 1.48275 0.84930 0.80008 0.77347 0.75450 1.17764 1.19110 1.17715 1.21983 0.99800 0.96096 1.01800 1.20889 0.97237 0.93994 0.97178 0.88835 0.92039 0.91143 0.93639 0.95264 0.77203 0.87673 0.88847 0.82832 0.81123 0.73681 0.89754 0.90110 0.88841 0.72742 0.84923 0.75892 0.82110 0.84368 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.14 -4.04 10.03 71.98 0.72 -3.32 16 2 C 0.12 4.85 6.39 86.38 0.55 5.41 16 3 N -0.75 -38.20 5.54 -473.39 -2.62 -40.82 16 4 C 0.59 37.11 7.50 84.72 0.64 37.75 16 5 O -0.68 -47.50 16.28 -4.86 -0.08 -47.58 16 6 C -1.09 -67.62 8.32 68.29 0.57 -67.05 16 7 S 1.48 87.26 12.78 -56.49 -0.72 86.54 16 8 O -1.02 -75.38 18.25 -148.98 -2.72 -78.10 16 9 C -0.42 -20.83 5.68 22.25 0.13 -20.70 16 10 C -0.11 -4.99 8.93 22.29 0.20 -4.79 16 11 C -0.11 -3.93 10.04 22.25 0.22 -3.71 16 12 C -0.12 -3.36 9.97 22.39 0.22 -3.14 16 13 C 0.13 4.38 6.30 38.17 0.24 4.62 16 14 N -0.66 -16.95 5.33 -306.59 -1.63 -18.58 16 15 C 0.58 16.64 7.65 86.61 0.66 17.30 16 16 O -0.56 -20.04 12.25 -4.12 -0.05 -20.09 16 17 C -0.26 -5.55 6.29 -19.04 -0.12 -5.67 16 18 C 0.12 2.19 7.18 41.78 0.30 2.49 16 19 C -0.10 -1.66 9.87 71.23 0.70 -0.95 16 20 N -0.52 -5.99 5.90 -171.06 -1.01 -7.00 16 21 C -0.01 -0.08 6.48 40.98 0.27 0.19 16 22 C -0.06 -0.38 3.08 71.24 0.22 -0.16 16 23 O -0.55 -4.32 12.88 -148.98 -1.92 -6.24 16 24 Si 1.00 7.10 25.84 68.60 1.77 8.88 16 25 H -0.25 -2.14 7.11 99.48 0.71 -1.44 16 26 H -0.27 -2.49 7.11 99.48 0.71 -1.78 16 27 H -0.25 -2.13 7.11 99.48 0.71 -1.43 16 28 C -0.17 -2.56 9.03 23.62 0.21 -2.35 16 29 C -0.07 -3.06 8.40 22.39 0.19 -2.87 16 30 H 0.09 2.10 8.14 -2.39 -0.02 2.08 16 31 H 0.06 1.66 8.14 -2.39 -0.02 1.64 16 32 H 0.07 1.80 8.14 -2.38 -0.02 1.78 16 33 H 0.05 1.94 8.14 -2.39 -0.02 1.92 16 34 H 0.03 1.32 8.14 -2.39 -0.02 1.30 16 35 H 0.39 17.69 8.42 -92.71 -0.78 16.90 16 36 H 0.10 6.24 6.09 -7.38 -0.04 6.19 16 37 H 0.09 4.74 6.48 -2.91 -0.02 4.72 16 38 H 0.15 4.06 8.06 -2.91 -0.02 4.04 16 39 H 0.17 3.14 8.06 -2.91 -0.02 3.11 16 40 H 0.42 7.38 7.96 -92.71 -0.74 6.64 16 41 H 0.08 1.38 8.14 -2.39 -0.02 1.37 16 42 H 0.08 1.85 6.48 -2.39 -0.02 1.84 16 43 H 0.09 0.97 8.14 -2.39 -0.02 0.95 16 44 H 0.43 2.61 8.96 -92.71 -0.83 1.78 16 45 H 0.13 0.54 7.96 -2.39 -0.02 0.52 16 46 H 0.39 1.11 8.70 -74.05 -0.64 0.47 16 47 H 0.16 1.67 5.86 -2.91 -0.02 1.66 16 48 H 0.14 5.93 6.22 -2.91 -0.02 5.91 16 Total: -1.00 -105.56 413.76 -4.25 -109.81 By element: Atomic # 1 Polarization: 61.36 SS G_CDS: -1.19 Total: 60.17 kcal Atomic # 6 Polarization: -52.90 SS G_CDS: 5.92 Total: -46.97 kcal Atomic # 7 Polarization: -61.14 SS G_CDS: -5.27 Total: -66.41 kcal Atomic # 8 Polarization: -147.25 SS G_CDS: -4.77 Total: -152.02 kcal Atomic # 14 Polarization: 7.10 SS G_CDS: 1.77 Total: 8.88 kcal Atomic # 16 Polarization: 87.26 SS G_CDS: -0.72 Total: 86.54 kcal Total: -105.56 -4.25 -109.81 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9704022_9865296.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -46.375 kcal (2) G-P(sol) polarization free energy of solvation -105.562 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -151.937 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -4.252 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -109.814 kcal (6) G-S(sol) free energy of system = (1) + (5) -156.189 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.82 seconds