Wall clock time and date at job start Tue Mar 9 2021 13:30:18 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42903 * 1 3 3 Si 1.86305 * 109.46735 * 2 1 4 4 C 1.50698 * 109.47563 * 239.99658 * 2 1 3 5 5 C 1.37851 * 119.89078 * 300.00220 * 4 2 1 6 6 C 1.39658 * 119.87659 * 179.97438 * 5 4 2 7 7 C 1.47690 * 120.16849 * 179.97438 * 6 5 4 8 8 O 1.21574 * 120.00470 * 180.02562 * 7 6 5 9 9 N 1.34784 * 119.99835 * 0.02562 * 7 6 5 10 10 C 1.46493 * 119.99864 * 179.72591 * 9 7 6 11 11 H 1.09000 * 112.85483 * 334.66378 * 10 9 7 12 12 C 1.53777 * 113.61833 * 105.86275 * 10 9 7 13 13 C 1.54054 * 86.98542 * 89.15903 * 12 10 9 14 14 H 1.09000 * 113.68870 * 270.87285 * 13 12 10 15 15 C 1.50706 * 113.61760 * 139.98265 * 13 12 10 16 16 C 1.38234 * 119.99822 * 322.23173 * 15 13 12 17 17 C 1.38233 * 119.99652 * 179.77095 * 16 15 13 18 18 C 1.38238 * 120.00160 * 0.50270 * 17 16 15 19 19 C 1.50693 * 120.00173 * 179.72632 * 18 17 16 20 20 F 1.39902 * 109.47560 * 270.02302 * 19 18 17 21 21 F 1.39904 * 109.47212 * 30.02248 * 19 18 17 22 22 F 1.39906 * 109.47313 * 150.02085 * 19 18 17 23 23 C 1.38238 * 119.99682 * 359.74726 * 18 17 16 24 24 C 1.38236 * 119.99557 * 142.50407 * 15 13 12 25 25 C 1.53777 * 87.07820 * 25.43361 * 13 12 10 26 26 C 1.39829 * 119.67061 * 0.25820 * 6 5 4 27 27 F 1.35096 * 120.11639 * 179.72558 * 26 6 5 28 28 C 1.38322 * 119.77341 * 359.46473 * 26 6 5 29 29 C 1.38203 * 120.11881 * 0.53402 * 28 26 6 30 30 H 0.96694 * 114.00700 * 300.00131 * 1 2 3 31 31 H 1.09003 * 109.46709 * 119.99771 * 2 1 3 32 32 H 1.48507 * 109.99581 * 178.67709 * 3 2 1 33 33 H 1.48497 * 109.99823 * 299.99599 * 3 2 1 34 34 H 1.07996 * 120.06367 * 0.02562 * 5 4 2 35 35 H 0.97000 * 119.99339 * 359.97438 * 9 7 6 36 36 H 1.09001 * 113.61733 * 203.66099 * 12 10 9 37 37 H 1.09003 * 113.61313 * 334.56504 * 12 10 9 38 38 H 1.07998 * 120.00182 * 0.02562 * 16 15 13 39 39 H 1.07998 * 120.00013 * 180.22717 * 17 16 15 40 40 H 1.08003 * 119.99924 * 179.97438 * 23 18 17 41 41 H 1.07996 * 120.00559 * 0.02562 * 24 15 13 42 42 H 1.08998 * 113.61800 * 220.02412 * 25 13 12 43 43 H 1.08999 * 113.61311 * 89.11809 * 25 13 12 44 44 H 1.08002 * 119.94345 * 180.27905 * 28 26 6 45 45 H 1.08008 * 119.83132 * 179.72359 * 29 28 26 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0499 1.7565 0.0000 4 6 1.9315 -0.7104 -1.2304 5 6 1.5971 -2.0303 -1.4462 6 6 2.0624 -2.6882 -2.5868 7 6 1.7086 -4.1023 -2.8242 8 8 2.1157 -4.6723 -3.8179 9 7 0.9343 -4.7610 -1.9392 10 6 0.5784 -6.1618 -2.1777 11 1 0.5992 -6.4300 -3.2340 12 6 1.3344 -7.1517 -1.2759 13 6 0.1880 -6.9775 -0.2617 14 1 0.3450 -6.1587 0.4403 15 6 -0.2179 -8.2605 0.4170 16 6 -0.2361 -9.4442 -0.2968 17 6 -0.6038 -10.6217 0.3270 18 6 -0.9634 -10.6138 1.6617 19 6 -1.3702 -11.8965 2.3401 20 9 -2.7516 -12.0751 2.2101 21 9 -0.7028 -12.9716 1.7434 22 9 -1.0337 -11.8337 3.6966 23 6 -0.9501 -9.4292 2.3741 24 6 -0.5774 -8.2525 1.7517 25 6 -0.7059 -6.6027 -1.4556 26 6 2.8700 -2.0032 -3.5000 27 9 3.3297 -2.6326 -4.6035 28 6 3.1921 -0.6774 -3.2724 29 6 2.7266 -0.0351 -2.1407 30 1 -0.3934 0.4417 0.7649 31 1 1.7923 -0.5138 0.8900 32 1 3.5346 1.7704 0.0322 33 1 1.5614 2.4679 -1.2085 34 1 0.9758 -2.5542 -0.7351 35 1 0.6098 -4.3062 -1.1462 36 1 1.4011 -8.1574 -1.6910 37 1 2.2938 -6.7745 -0.9216 38 1 0.0410 -9.4497 -1.3406 39 1 -0.6145 -11.5471 -0.2297 40 1 -1.2315 -9.4229 3.4168 41 1 -0.5679 -7.3269 2.3081 42 1 -1.3926 -5.7825 -1.2463 43 1 -1.1960 -7.4585 -1.9197 44 1 3.8119 -0.1444 -3.9782 45 1 2.9847 0.9989 -1.9654 There are 71 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 71 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_9705038_12335834.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:30:18 Heat of formation + Delta-G solvation = -173.226949 kcal Electronic energy + Delta-G solvation = -35581.815708 eV Core-core repulsion = 30031.391129 eV Total energy + Delta-G solvation = -5550.424579 eV No. of doubly occupied orbitals = 71 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 396.114 amu Computer time = 0.86 seconds Orbital eigenvalues (eV) -51.08843 -49.90811 -48.60797 -48.54982 -41.88994 -41.01372 -40.04575 -38.91272 -37.65690 -34.95447 -33.25985 -32.62699 -32.31943 -32.04169 -27.99622 -26.93848 -26.75821 -25.89881 -24.95430 -24.17113 -23.27913 -22.40649 -21.67004 -20.39455 -19.57175 -19.40983 -19.31140 -19.14123 -18.74237 -18.40201 -17.80475 -17.43255 -16.84952 -16.77912 -16.48115 -16.41802 -16.02355 -15.88747 -15.76317 -15.64076 -15.43537 -15.36384 -15.12522 -15.00578 -14.83411 -14.71212 -14.68513 -14.56523 -14.49185 -14.41630 -14.22193 -14.18707 -13.96031 -13.68772 -13.49017 -13.30161 -12.82095 -12.67788 -12.59852 -12.53911 -12.13539 -12.09958 -11.96228 -11.43181 -11.07629 -10.59463 -10.49181 -10.23150 -10.17817 -10.05423 -9.87124 -5.15695 -0.59470 -0.23242 -0.16449 0.13692 1.05938 1.45188 1.57919 1.69390 1.76749 1.84904 2.28840 2.39034 2.74386 2.94436 3.03934 3.04291 3.21228 3.27262 3.40043 3.42446 3.44847 3.50281 3.54297 3.65225 3.72657 3.75692 3.80844 3.94305 3.96823 4.09573 4.13377 4.24670 4.35389 4.44210 4.50686 4.55093 4.57616 4.61956 4.67698 4.72457 4.76505 4.79981 4.83627 4.91745 4.98323 5.05225 5.06343 5.31091 5.43244 5.46375 5.61619 6.27773 6.38435 7.04868 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.546 6.546 2 C -0.071 4.071 3 Si 0.683 3.317 4 C -0.095 4.095 5 C -0.027 4.027 6 C -0.174 4.174 7 C 0.564 3.436 8 O -0.516 6.516 9 N -0.708 5.708 10 C 0.120 3.880 11 H 0.109 0.891 12 C -0.143 4.143 13 C -0.080 4.080 14 H 0.102 0.898 15 C -0.038 4.038 16 C -0.119 4.119 17 C -0.066 4.066 18 C -0.187 4.187 19 C 0.508 3.492 20 F -0.176 7.176 21 F -0.177 7.177 22 F -0.177 7.177 23 C -0.067 4.067 24 C -0.117 4.117 25 C -0.134 4.134 26 C 0.168 3.832 27 F -0.109 7.109 28 C -0.154 4.154 29 C -0.067 4.067 30 H 0.386 0.614 31 H 0.080 0.920 32 H -0.252 1.252 33 H -0.248 1.248 34 H 0.141 0.859 35 H 0.401 0.599 36 H 0.098 0.902 37 H 0.078 0.922 38 H 0.136 0.864 39 H 0.137 0.863 40 H 0.136 0.864 41 H 0.135 0.865 42 H 0.081 0.919 43 H 0.102 0.898 44 H 0.150 0.850 45 H 0.133 0.867 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.280 6.288 5.640 8.543 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.352 6.352 2 C -0.181 4.181 3 Si 0.584 3.416 4 C -0.095 4.095 5 C -0.046 4.046 6 C -0.178 4.178 7 C 0.351 3.649 8 O -0.392 6.392 9 N -0.361 5.361 10 C 0.015 3.985 11 H 0.127 0.873 12 C -0.182 4.182 13 C -0.098 4.098 14 H 0.120 0.880 15 C -0.038 4.038 16 C -0.136 4.136 17 C -0.084 4.084 18 C -0.189 4.189 19 C 0.454 3.546 20 F -0.158 7.158 21 F -0.158 7.158 22 F -0.158 7.158 23 C -0.085 4.085 24 C -0.135 4.135 25 C -0.172 4.172 26 C 0.147 3.853 27 F -0.087 7.087 28 C -0.173 4.173 29 C -0.084 4.084 30 H 0.234 0.766 31 H 0.098 0.902 32 H -0.177 1.177 33 H -0.172 1.172 34 H 0.158 0.842 35 H 0.237 0.763 36 H 0.117 0.883 37 H 0.096 0.904 38 H 0.154 0.846 39 H 0.155 0.845 40 H 0.154 0.846 41 H 0.152 0.848 42 H 0.099 0.901 43 H 0.120 0.880 44 H 0.168 0.832 45 H 0.151 0.849 Dipole moment (debyes) X Y Z Total from point charges -0.404 6.077 3.895 7.230 hybrid contribution -0.099 -0.679 0.314 0.754 sum -0.503 5.399 4.209 6.864 Atomic orbital electron populations 1.86473 1.16874 1.81875 1.50006 1.24629 0.86011 1.10579 0.96907 0.95018 0.80867 0.77824 0.87895 1.19309 0.99503 0.94193 0.96505 1.20982 0.95352 0.93606 0.94640 1.20048 1.04544 0.95261 0.97951 1.17923 0.78583 0.85432 0.83011 1.90880 1.52411 1.68386 1.27482 1.45522 1.52531 1.12237 1.25767 1.21865 0.95281 0.80320 1.01021 0.87338 1.23632 0.97924 1.00542 0.96074 1.21767 0.97373 0.94878 0.95802 0.87975 1.19949 0.95419 0.94792 0.93642 1.21032 1.00581 0.91367 1.00650 1.20970 0.95307 0.99487 0.92639 1.19996 1.09659 0.92776 0.96434 1.18320 0.75000 0.84614 0.76715 1.93241 1.30919 1.95968 1.95624 1.93204 1.80490 1.58636 1.83479 1.93202 1.92165 1.96516 1.33950 1.20977 0.96140 0.91153 1.00214 1.21066 0.99954 0.98083 0.94380 1.23430 0.96069 1.02402 0.95276 1.17695 0.93677 0.90406 0.83513 1.91634 1.85833 1.81932 1.49308 1.21117 1.03507 0.93055 0.99640 1.20962 0.95618 0.99210 0.92642 0.76589 0.90216 1.17693 1.17238 0.84174 0.76308 0.88327 0.90365 0.84581 0.84527 0.84565 0.84763 0.90080 0.87974 0.83214 0.84939 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 1.54 12.74 -35.23 -0.45 1.09 16 2 C -0.07 0.21 2.81 36.00 0.10 0.31 16 3 Si 0.68 -2.27 29.78 -169.99 -5.06 -7.33 16 4 C -0.09 0.04 5.42 -104.68 -0.57 -0.53 16 5 C -0.03 0.02 9.09 -39.19 -0.36 -0.34 16 6 C -0.17 -0.31 5.88 -104.91 -0.62 -0.93 16 7 C 0.56 1.55 7.77 -12.40 -0.10 1.45 16 8 O -0.52 -3.51 14.96 5.30 0.08 -3.43 16 9 N -0.71 0.65 5.21 -54.01 -0.28 0.37 16 10 C 0.12 -0.16 4.29 -67.12 -0.29 -0.45 16 11 H 0.11 0.05 7.50 -51.93 -0.39 -0.34 16 12 C -0.14 0.30 7.27 -25.78 -0.19 0.11 16 13 C -0.08 0.26 3.87 -90.81 -0.35 -0.09 16 14 H 0.10 -0.44 8.09 -51.93 -0.42 -0.86 16 15 C -0.04 0.07 5.29 -104.62 -0.55 -0.48 16 16 C -0.12 0.19 8.60 -39.58 -0.34 -0.15 16 17 C -0.07 0.03 9.40 -39.58 -0.37 -0.34 16 18 C -0.19 -0.09 5.45 -104.63 -0.57 -0.66 16 19 C 0.51 0.83 3.36 36.00 0.12 0.95 16 20 F -0.18 -0.44 17.30 2.25 0.04 -0.40 16 21 F -0.18 -0.40 16.46 2.25 0.04 -0.36 16 22 F -0.18 -0.38 16.46 2.25 0.04 -0.34 16 23 C -0.07 0.04 9.40 -39.58 -0.37 -0.33 16 24 C -0.12 0.21 9.71 -39.58 -0.38 -0.18 16 25 C -0.13 0.43 7.29 -25.92 -0.19 0.24 16 26 C 0.17 0.48 7.29 -38.96 -0.28 0.19 16 27 F -0.11 -0.58 15.55 2.25 0.04 -0.54 16 28 C -0.15 -0.11 10.01 -39.56 -0.40 -0.50 16 29 C -0.07 0.00 8.66 -39.51 -0.34 -0.35 16 30 H 0.39 -2.91 8.74 45.56 0.40 -2.52 16 31 H 0.08 -0.39 7.96 -51.93 -0.41 -0.80 16 32 H -0.25 0.24 7.11 56.52 0.40 0.64 16 33 H -0.25 0.01 7.11 56.52 0.40 0.41 16 34 H 0.14 -0.46 6.40 -52.49 -0.34 -0.80 16 35 H 0.40 -1.43 6.74 -40.82 -0.27 -1.71 16 36 H 0.10 -0.25 6.33 -51.93 -0.33 -0.58 16 37 H 0.08 -0.09 8.14 -51.93 -0.42 -0.51 16 38 H 0.14 -0.44 6.68 -52.49 -0.35 -0.79 16 39 H 0.14 -0.21 7.60 -52.49 -0.40 -0.61 16 40 H 0.14 -0.24 7.60 -52.48 -0.40 -0.64 16 41 H 0.13 -0.51 8.05 -52.49 -0.42 -0.93 16 42 H 0.08 -0.29 8.14 -51.93 -0.42 -0.72 16 43 H 0.10 -0.35 7.71 -51.93 -0.40 -0.75 16 44 H 0.15 -0.19 8.06 -52.49 -0.42 -0.61 16 45 H 0.13 -0.14 4.86 -52.48 -0.25 -0.39 16 LS Contribution 392.17 15.07 5.91 5.91 Total: 0.00 -9.46 392.17 -10.16 -19.61 By element: Atomic # 1 Polarization: -8.05 SS G_CDS: -4.46 Total: -12.51 kcal Atomic # 6 Polarization: 3.98 SS G_CDS: -6.05 Total: -2.06 kcal Atomic # 7 Polarization: 0.65 SS G_CDS: -0.28 Total: 0.37 kcal Atomic # 8 Polarization: -1.97 SS G_CDS: -0.37 Total: -2.34 kcal Atomic # 9 Polarization: -1.80 SS G_CDS: 0.15 Total: -1.65 kcal Atomic # 14 Polarization: -2.27 SS G_CDS: -5.06 Total: -7.33 kcal Total LS contribution 5.91 Total: 5.91 kcal Total: -9.46 -10.16 -19.61 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9705038_12335834.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -153.615 kcal (2) G-P(sol) polarization free energy of solvation -9.455 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -163.070 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.157 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.612 kcal (6) G-S(sol) free energy of system = (1) + (5) -173.227 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.86 seconds