Wall clock time and date at job start Tue Mar 9 2021 13:30:28 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42898 * 1 3 3 Si 1.86300 * 109.46973 * 2 1 4 4 C 1.50702 * 109.47141 * 119.99463 * 2 1 3 5 5 C 1.34446 * 126.48428 * 254.97398 * 4 2 1 6 6 N 1.36570 * 109.98297 * 180.02562 * 5 4 2 7 7 C 1.37829 * 109.86159 * 0.02562 * 6 5 4 8 8 C 1.38640 * 133.37931 * 180.02562 * 7 6 5 9 9 C 1.39316 * 119.66968 * 179.97438 * 8 7 6 10 10 C 1.47575 * 119.83428 * 179.97438 * 9 8 7 11 11 O 1.21586 * 119.99964 * 359.97438 * 10 9 8 12 12 N 1.34777 * 119.99900 * 180.02562 * 10 9 8 13 13 C 1.46504 * 120.00109 * 179.97438 * 12 10 9 14 14 H 1.09000 * 112.90436 * 23.74379 * 13 12 10 15 15 C 1.53775 * 113.61590 * 154.99858 * 13 12 10 16 16 C 1.53781 * 87.08154 * 89.11639 * 15 13 12 17 17 H 1.08995 * 113.61537 * 270.80014 * 16 15 13 18 18 C 1.50700 * 113.61365 * 139.98192 * 16 15 13 19 19 C 1.38234 * 120.00260 * 119.99982 * 18 16 15 20 20 C 1.38234 * 120.00240 * 179.97438 * 19 18 16 21 21 C 1.38233 * 120.00037 * 0.26327 * 20 19 18 22 22 C 1.50693 * 120.00207 * 179.72405 * 21 20 19 23 23 F 1.39904 * 109.47272 * 89.99432 * 22 21 20 24 24 F 1.39901 * 109.47232 * 209.99686 * 22 21 20 25 25 F 1.39894 * 109.47054 * 329.99662 * 22 21 20 26 26 C 1.38239 * 119.99756 * 359.45918 * 21 20 19 27 27 C 1.38234 * 119.99992 * 0.53603 * 26 21 20 28 28 C 1.53778 * 87.08025 * 25.43498 * 16 15 13 29 29 C 1.40209 * 120.33142 * 0.25177 * 9 8 7 30 30 C 1.36228 * 120.37570 * 359.48392 * 29 9 8 31 31 C 1.39870 * 119.96381 * 0.51345 * 30 29 9 32 32 H 0.96703 * 114.00255 * 60.00116 * 1 2 3 33 33 H 1.08996 * 109.47047 * 240.00250 * 2 1 3 34 34 H 1.48496 * 110.00573 * 59.99985 * 3 2 1 35 35 H 1.48501 * 110.00067 * 181.32094 * 3 2 1 36 36 H 1.08000 * 125.01315 * 0.02688 * 5 4 2 37 37 H 0.96996 * 125.06511 * 179.97438 * 6 5 4 38 38 H 1.08007 * 120.16720 * 359.94971 * 8 7 6 39 39 H 0.97003 * 120.00003 * 359.97438 * 12 10 9 40 40 H 1.09006 * 113.61355 * 334.56731 * 15 13 12 41 41 H 1.08998 * 113.61666 * 203.66840 * 15 13 12 42 42 H 1.07999 * 119.99751 * 359.97438 * 19 18 16 43 43 H 1.08002 * 119.99744 * 179.97438 * 20 19 18 44 44 H 1.08000 * 119.99965 * 180.30838 * 26 21 20 45 45 H 1.08002 * 120.00264 * 179.76377 * 27 26 21 46 46 H 1.08995 * 113.61786 * 89.11952 * 28 16 15 47 47 H 1.09008 * 113.61112 * 220.02213 * 28 16 15 48 48 H 1.08003 * 119.80597 * 179.74275 * 29 9 8 49 49 H 1.08003 * 120.01504 * 180.22843 * 30 29 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0499 1.7565 0.0000 4 6 1.9313 -0.7103 1.2305 5 6 2.4620 -0.1362 2.3243 6 7 2.8042 -1.0946 3.2350 7 6 2.4957 -2.3431 2.7393 8 6 2.6321 -3.6278 3.2423 9 6 2.2141 -4.7155 2.4786 10 6 2.3581 -6.0845 3.0103 11 8 2.8410 -6.2611 4.1122 12 7 1.9554 -7.1392 2.2741 13 6 2.0988 -8.4984 2.8017 14 1 2.1413 -8.5286 3.8905 15 6 1.1041 -9.5025 2.1959 16 6 2.1521 -9.7599 1.1004 17 1 2.0590 -9.0946 0.2421 18 6 2.2702 -11.2098 0.7067 19 6 2.0231 -11.5942 -0.5979 20 6 2.1320 -12.9240 -0.9591 21 6 2.4827 -13.8703 -0.0145 22 6 2.5953 -15.3209 -0.4068 23 9 3.9035 -15.5915 -0.8224 24 9 2.2789 -16.1271 0.6919 25 9 1.7081 -15.5910 -1.4542 26 6 2.7355 -13.4852 1.2889 27 6 2.6267 -12.1553 1.6501 28 6 3.2126 -9.3098 2.1191 29 6 1.6627 -4.5162 1.2050 30 6 1.5202 -3.2569 0.7054 31 6 1.9351 -2.1548 1.4601 32 1 -0.3934 0.4417 -0.7651 33 1 1.7923 -0.5138 -0.8900 34 1 1.5615 2.4680 1.2084 35 1 3.5345 1.7704 -0.0322 36 1 2.5977 0.9263 2.4625 37 1 3.2053 -0.9224 4.1012 38 1 3.0606 -3.7847 4.2213 39 1 1.5705 -6.9983 1.3949 40 1 0.1890 -9.0408 1.8250 41 1 0.9152 -10.3676 2.8315 42 1 1.7449 -10.8554 -1.3350 43 1 1.9384 -13.2243 -1.9783 44 1 3.0143 -14.2238 2.0258 45 1 2.8204 -11.8549 2.6692 46 1 3.6003 -10.1223 2.7336 47 1 3.9997 -8.6925 1.6860 48 1 1.3453 -5.3658 0.6185 49 1 1.0913 -3.1099 -0.2749 There are 75 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 75 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_9705038_12335838.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:30:28 Heat of formation + Delta-G solvation = -97.807296 kcal Electronic energy + Delta-G solvation = -37522.469677 eV Core-core repulsion = 31967.353704 eV Total energy + Delta-G solvation = -5555.115973 eV No. of doubly occupied orbitals = 75 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 417.134 amu Computer time = 1.04 seconds Orbital eigenvalues (eV) -51.07354 -48.59391 -48.53371 -42.53196 -41.73917 -40.54706 -39.10590 -37.81254 -37.48390 -34.79566 -33.39788 -32.82483 -32.20248 -30.82288 -30.57370 -27.91786 -26.89270 -26.52311 -25.50775 -24.55093 -23.99892 -23.67137 -22.47420 -21.62035 -20.65384 -20.32197 -19.55617 -19.39485 -19.33820 -19.25190 -18.41366 -18.28842 -17.53555 -17.34676 -16.77347 -16.56054 -16.08782 -15.93644 -15.87992 -15.67080 -15.45076 -15.39345 -15.31927 -15.09680 -15.04004 -14.96539 -14.86247 -14.80235 -14.70226 -14.69225 -14.57402 -14.47458 -14.43774 -14.13617 -13.84640 -13.64782 -13.37669 -13.25954 -12.79504 -12.67728 -12.60274 -12.51186 -12.11923 -12.06425 -11.94340 -11.90581 -11.38868 -10.96937 -10.79814 -10.26543 -10.19628 -10.14280 -10.02054 -9.39857 -8.86483 -5.07342 -0.30881 -0.20671 0.16089 0.35259 1.24093 1.28381 1.59759 1.71204 1.80172 1.90270 1.95434 2.13906 2.31687 2.76199 2.88174 3.05846 3.26665 3.45413 3.47226 3.48299 3.51306 3.55992 3.65683 3.68341 3.72732 3.75140 3.80277 3.94785 3.99606 4.04347 4.15899 4.19884 4.27560 4.33056 4.41463 4.48870 4.52346 4.53890 4.58294 4.67157 4.71788 4.74167 4.83443 4.87862 4.94461 4.96562 5.08134 5.08702 5.18911 5.35038 5.38477 5.42599 5.52834 5.55807 5.64167 5.93561 6.30859 6.43052 6.66581 7.18748 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.547 6.547 2 C -0.034 4.034 3 Si 0.684 3.316 4 C -0.163 4.163 5 C 0.072 3.928 6 N -0.583 5.583 7 C 0.082 3.918 8 C -0.055 4.055 9 C -0.122 4.122 10 C 0.568 3.432 11 O -0.535 6.535 12 N -0.709 5.709 13 C 0.121 3.879 14 H 0.108 0.892 15 C -0.135 4.135 16 C -0.080 4.080 17 H 0.102 0.898 18 C -0.037 4.037 19 C -0.117 4.117 20 C -0.067 4.067 21 C -0.188 4.188 22 C 0.508 3.492 23 F -0.177 7.177 24 F -0.177 7.177 25 F -0.177 7.177 26 C -0.066 4.066 27 C -0.119 4.119 28 C -0.144 4.144 29 C -0.113 4.113 30 C -0.070 4.070 31 C -0.062 4.062 32 H 0.379 0.621 33 H 0.071 0.929 34 H -0.253 1.253 35 H -0.256 1.256 36 H 0.170 0.830 37 H 0.423 0.577 38 H 0.137 0.863 39 H 0.402 0.598 40 H 0.080 0.920 41 H 0.101 0.899 42 H 0.135 0.865 43 H 0.136 0.864 44 H 0.137 0.863 45 H 0.136 0.864 46 H 0.097 0.903 47 H 0.078 0.922 48 H 0.126 0.874 49 H 0.131 0.869 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.407 5.752 -4.100 7.202 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.353 6.353 2 C -0.145 4.145 3 Si 0.585 3.415 4 C -0.171 4.171 5 C -0.057 4.057 6 N -0.185 5.185 7 C -0.024 4.024 8 C -0.076 4.076 9 C -0.126 4.126 10 C 0.356 3.644 11 O -0.412 6.412 12 N -0.361 5.361 13 C 0.015 3.985 14 H 0.126 0.874 15 C -0.173 4.173 16 C -0.098 4.098 17 H 0.121 0.879 18 C -0.038 4.038 19 C -0.135 4.135 20 C -0.085 4.085 21 C -0.189 4.189 22 C 0.454 3.546 23 F -0.158 7.158 24 F -0.158 7.158 25 F -0.158 7.158 26 C -0.084 4.084 27 C -0.136 4.136 28 C -0.182 4.182 29 C -0.133 4.133 30 C -0.088 4.088 31 C -0.067 4.067 32 H 0.227 0.773 33 H 0.089 0.911 34 H -0.178 1.178 35 H -0.180 1.180 36 H 0.187 0.813 37 H 0.261 0.739 38 H 0.155 0.845 39 H 0.238 0.762 40 H 0.099 0.901 41 H 0.119 0.881 42 H 0.152 0.848 43 H 0.154 0.846 44 H 0.154 0.846 45 H 0.154 0.846 46 H 0.116 0.884 47 H 0.096 0.904 48 H 0.144 0.856 49 H 0.149 0.851 Dipole moment (debyes) X Y Z Total from point charges -0.419 5.900 -2.200 6.310 hybrid contribution 0.111 -0.675 -0.022 0.685 sum -0.308 5.224 -2.222 5.686 Atomic orbital electron populations 1.86540 1.17575 1.81730 1.49447 1.23931 0.85275 1.09196 0.96082 0.95075 0.80874 0.77629 0.87957 1.19620 1.09422 0.91488 0.96556 1.21659 1.00526 0.94144 0.89322 1.41679 1.54765 1.04013 1.18059 1.18073 1.03255 0.86268 0.94794 1.20071 0.99365 0.87965 1.00174 1.19396 1.05160 0.92224 0.95836 1.18133 0.77284 0.84465 0.84523 1.90799 1.44093 1.86155 1.20182 1.45547 1.64356 1.05227 1.20997 1.21841 0.96171 0.80577 0.99915 0.87379 1.23437 0.97261 0.99382 0.97190 1.21720 0.97982 0.92220 0.97925 0.87939 1.19960 0.95239 0.95239 0.93318 1.21073 1.00752 0.95530 0.96136 1.20974 0.95658 0.92676 0.99178 1.19990 1.10534 0.91416 0.96944 1.18320 0.73946 0.87683 0.74695 1.93242 1.37178 1.94930 1.90431 1.93202 1.92679 1.76022 1.53916 1.93199 1.68834 1.94931 1.58868 1.20966 0.96039 0.97070 0.94355 1.21033 1.00535 0.91868 1.00209 1.23589 0.96997 1.00129 0.97533 1.20669 1.00669 0.97281 0.94680 1.20171 0.98583 0.90370 0.99692 1.19157 1.00974 0.92857 0.93674 0.77333 0.91090 1.17784 1.18021 0.81289 0.73934 0.84511 0.76213 0.90125 0.88101 0.84751 0.84585 0.84559 0.84586 0.88435 0.90369 0.85574 0.85094 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 0.09 12.86 -35.23 -0.45 -0.36 16 2 C -0.03 0.02 3.05 36.01 0.11 0.13 16 3 Si 0.68 -1.44 30.79 -169.99 -5.23 -6.67 16 4 C -0.16 -0.31 5.61 -102.74 -0.58 -0.88 16 5 C 0.07 0.06 10.43 -16.78 -0.17 -0.11 16 6 N -0.58 -0.23 6.07 -10.68 -0.06 -0.29 16 7 C 0.08 0.19 7.26 -84.00 -0.61 -0.42 16 8 C -0.05 -0.13 9.61 -39.03 -0.37 -0.50 16 9 C -0.12 -0.22 5.87 -104.95 -0.62 -0.83 16 10 C 0.57 1.37 7.76 -12.45 -0.10 1.27 16 11 O -0.53 -3.22 15.91 5.29 0.08 -3.13 16 12 N -0.71 0.63 5.21 -54.04 -0.28 0.35 16 13 C 0.12 -0.16 4.32 -67.12 -0.29 -0.45 16 14 H 0.11 0.05 7.47 -51.93 -0.39 -0.34 16 15 C -0.13 0.41 7.29 -25.92 -0.19 0.22 16 16 C -0.08 0.24 3.86 -90.96 -0.35 -0.11 16 17 H 0.10 -0.42 8.09 -51.93 -0.42 -0.84 16 18 C -0.04 0.06 5.29 -104.62 -0.55 -0.49 16 19 C -0.12 0.18 9.71 -39.58 -0.38 -0.21 16 20 C -0.07 0.03 9.40 -39.58 -0.37 -0.35 16 21 C -0.19 -0.12 5.45 -104.63 -0.57 -0.69 16 22 C 0.51 0.90 3.36 36.00 0.12 1.02 16 23 F -0.18 -0.48 17.30 2.25 0.04 -0.44 16 24 F -0.18 -0.41 16.47 2.25 0.04 -0.37 16 25 F -0.18 -0.40 16.46 2.25 0.04 -0.37 16 26 C -0.07 0.02 9.40 -39.58 -0.37 -0.35 16 27 C -0.12 0.17 8.61 -39.58 -0.34 -0.17 16 28 C -0.14 0.29 7.25 -25.92 -0.19 0.10 16 29 C -0.11 0.01 9.46 -39.57 -0.37 -0.37 16 30 C -0.07 -0.06 10.03 -39.69 -0.40 -0.46 16 31 C -0.06 -0.16 6.35 -105.04 -0.67 -0.83 16 32 H 0.38 -2.00 8.74 45.56 0.40 -1.60 16 33 H 0.07 -0.14 7.96 -51.93 -0.41 -0.55 16 34 H -0.25 -0.14 7.04 56.52 0.40 0.26 16 35 H -0.26 -0.13 7.11 56.52 0.40 0.27 16 36 H 0.17 -0.20 6.30 -52.49 -0.33 -0.53 16 37 H 0.42 -1.07 8.96 -40.82 -0.37 -1.44 16 38 H 0.14 0.29 7.62 -52.48 -0.40 -0.11 16 39 H 0.40 -1.36 6.69 -40.82 -0.27 -1.64 16 40 H 0.08 -0.27 8.14 -51.93 -0.42 -0.70 16 41 H 0.10 -0.33 7.72 -51.93 -0.40 -0.73 16 42 H 0.13 -0.47 8.05 -52.49 -0.42 -0.89 16 43 H 0.14 -0.21 7.60 -52.49 -0.40 -0.61 16 44 H 0.14 -0.19 7.61 -52.49 -0.40 -0.59 16 45 H 0.14 -0.42 6.66 -52.49 -0.35 -0.77 16 46 H 0.10 -0.24 6.31 -51.93 -0.33 -0.57 16 47 H 0.08 -0.08 8.14 -51.92 -0.42 -0.50 16 48 H 0.13 -0.41 6.36 -52.48 -0.33 -0.75 16 49 H 0.13 -0.11 8.06 -52.48 -0.42 -0.53 16 LS Contribution 421.09 15.07 6.35 6.35 Total: 0.00 -10.50 421.09 -12.05 -22.56 By element: Atomic # 1 Polarization: -7.85 SS G_CDS: -5.30 Total: -13.15 kcal Atomic # 6 Polarization: 2.81 SS G_CDS: -7.27 Total: -4.46 kcal Atomic # 7 Polarization: 0.41 SS G_CDS: -0.35 Total: 0.06 kcal Atomic # 8 Polarization: -3.13 SS G_CDS: -0.37 Total: -3.50 kcal Atomic # 9 Polarization: -1.30 SS G_CDS: 0.11 Total: -1.18 kcal Atomic # 14 Polarization: -1.44 SS G_CDS: -5.23 Total: -6.67 kcal Total LS contribution 6.35 Total: 6.35 kcal Total: -10.50 -12.05 -22.56 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9705038_12335838.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -75.250 kcal (2) G-P(sol) polarization free energy of solvation -10.504 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -85.754 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.054 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.557 kcal (6) G-S(sol) free energy of system = (1) + (5) -97.807 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.04 seconds