Wall clock time and date at job start Tue Mar 9 2021 13:32:26 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42894 * 1 3 3 Si 1.86295 * 109.47458 * 2 1 4 4 C 1.50704 * 109.47106 * 120.00402 * 2 1 3 5 5 C 1.34192 * 126.53929 * 254.97224 * 4 2 1 6 6 N 1.36863 * 109.96888 * 180.02562 * 5 4 2 7 7 C 1.37404 * 109.98086 * 0.02562 * 6 5 4 8 8 C 1.39327 * 133.25321 * 180.02562 * 7 6 5 9 9 C 1.36351 * 120.23836 * 180.02562 * 8 7 6 10 10 C 1.40170 * 120.66958 * 359.97438 * 9 8 7 11 11 C 1.47650 * 119.97280 * 179.97438 * 10 9 8 12 12 O 1.21580 * 120.00162 * 180.02562 * 11 10 9 13 13 N 1.34776 * 120.00184 * 0.02562 * 11 10 9 14 14 C 1.46494 * 120.00271 * 180.02562 * 13 11 10 15 15 H 1.09000 * 112.84833 * 23.79265 * 14 13 11 16 16 C 1.53774 * 113.61903 * 154.99670 * 14 13 11 17 17 C 1.53779 * 87.08367 * 89.19850 * 16 14 13 18 18 H 1.08998 * 113.61240 * 270.79874 * 17 16 14 19 19 C 1.50697 * 113.61325 * 139.98345 * 17 16 14 20 20 C 1.38238 * 119.99801 * 120.00227 * 19 17 16 21 21 C 1.38235 * 120.00123 * 179.97438 * 20 19 17 22 22 C 1.38243 * 119.99602 * 359.97438 * 21 20 19 23 23 C 1.50706 * 119.99586 * 179.97438 * 22 21 20 24 24 F 1.39903 * 109.46746 * 89.99985 * 23 22 21 25 25 F 1.39901 * 109.46962 * 209.99766 * 23 22 21 26 26 F 1.39894 * 109.47464 * 329.99846 * 23 22 21 27 27 C 1.38233 * 120.00248 * 0.27275 * 22 21 20 28 28 C 1.38234 * 120.00167 * 299.97243 * 19 17 16 29 29 C 1.53774 * 87.08087 * 25.43416 * 17 16 14 30 30 C 1.39190 * 120.04898 * 0.26250 * 10 9 8 31 31 C 1.39222 * 119.39474 * 359.49006 * 30 10 9 32 32 H 0.96701 * 113.99941 * 59.99410 * 1 2 3 33 33 H 1.09004 * 109.47352 * 239.99769 * 2 1 3 34 34 H 1.48500 * 110.00090 * 298.67946 * 3 2 1 35 35 H 1.48499 * 110.00137 * 60.00331 * 3 2 1 36 36 H 1.08001 * 125.01297 * 359.97438 * 5 4 2 37 37 H 0.96993 * 125.01269 * 180.02562 * 6 5 4 38 38 H 1.07999 * 119.87972 * 0.02562 * 8 7 6 39 39 H 1.07997 * 119.66499 * 180.02562 * 9 8 7 40 40 H 0.97002 * 119.99935 * 359.97438 * 13 11 10 41 41 H 1.09001 * 113.61600 * 334.64985 * 16 14 13 42 42 H 1.09001 * 113.69200 * 203.76078 * 16 14 13 43 43 H 1.08000 * 120.00524 * 359.97234 * 20 19 17 44 44 H 1.07999 * 120.00181 * 179.97438 * 21 20 19 45 45 H 1.08004 * 119.99934 * 179.72684 * 27 22 21 46 46 H 1.07999 * 119.99973 * 0.02562 * 28 19 17 47 47 H 1.08996 * 113.61649 * 89.11705 * 29 17 16 48 48 H 1.09001 * 113.61821 * 220.02328 * 29 17 16 49 49 H 1.08001 * 120.29908 * 179.74627 * 30 10 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4289 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9313 -0.7105 1.2304 5 6 2.4612 -0.1388 2.3228 6 7 2.8035 -1.1007 3.2343 7 6 2.4964 -2.3457 2.7408 8 6 2.6351 -3.6353 3.2498 9 6 2.2320 -4.7106 2.5147 10 6 1.6735 -4.5371 1.2409 11 6 1.2427 -5.7125 0.4580 12 8 0.7586 -5.5627 -0.6471 13 7 1.3862 -6.9516 0.9684 14 6 0.9593 -8.1179 0.1915 15 1 0.9376 -7.9268 -0.8814 16 6 1.6942 -9.4140 0.5717 17 6 0.5890 -9.6414 1.6164 18 1 0.8051 -9.1918 2.5855 19 6 0.1458 -11.0778 1.7235 20 6 0.2708 -11.7520 2.9238 21 6 -0.1361 -13.0694 3.0223 22 6 -0.6686 -13.7125 1.9204 23 6 -1.1117 -15.1489 2.0276 24 9 -2.4562 -15.1947 2.4116 25 9 -0.9592 -15.7777 0.7872 26 9 -0.3311 -15.8077 2.9834 27 6 -0.7888 -13.0399 0.7188 28 6 -0.3862 -11.7210 0.6216 29 6 -0.3217 -8.7807 0.7251 30 6 1.5301 -3.2580 0.7110 31 6 1.9360 -2.1580 1.4617 32 1 -0.3933 0.4418 -0.7650 33 1 1.7923 -0.5139 -0.8900 34 1 1.5880 2.4585 -1.2242 35 1 1.5616 2.4678 1.2085 36 1 2.5980 0.9234 2.4617 37 1 3.2039 -0.9288 4.1008 38 1 3.0635 -3.7836 4.2300 39 1 2.3435 -5.7061 2.9184 40 1 1.7728 -7.0713 1.8500 41 1 2.6790 -9.2459 1.0075 42 1 1.7047 -10.1606 -0.2225 43 1 0.6864 -11.2495 3.7848 44 1 -0.0381 -13.5963 3.9599 45 1 -1.2007 -13.5437 -0.1432 46 1 -0.4838 -11.1943 -0.3161 47 1 -0.8633 -9.3532 -0.0278 48 1 -0.9644 -8.1010 1.2847 49 1 1.1040 -3.1200 -0.2717 There are 75 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 75 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_9705038_13287722.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:32:26 Heat of formation + Delta-G solvation = -98.235937 kcal Electronic energy + Delta-G solvation = -37605.700015 eV Core-core repulsion = 32050.565455 eV Total energy + Delta-G solvation = -5555.134560 eV No. of doubly occupied orbitals = 75 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 417.134 amu Computer time = 1.08 seconds Orbital eigenvalues (eV) -51.06732 -48.58837 -48.52737 -42.48728 -41.70098 -40.49057 -39.06393 -37.89743 -37.42077 -34.74812 -33.38870 -32.80047 -32.19148 -30.84517 -30.45381 -27.89082 -26.86436 -26.46013 -25.52012 -24.54635 -23.99269 -23.49582 -22.46806 -21.68462 -20.60625 -20.29048 -19.53524 -19.38656 -19.26048 -19.10908 -18.49503 -18.41758 -17.49812 -17.33924 -16.74205 -16.53487 -16.03591 -15.97240 -15.82948 -15.74426 -15.41355 -15.36765 -15.31486 -15.05107 -15.00730 -14.93059 -14.81066 -14.79294 -14.68713 -14.62562 -14.51971 -14.42261 -14.21624 -14.06566 -13.81515 -13.61792 -13.41862 -13.33556 -12.78724 -12.74928 -12.56754 -12.50082 -12.13704 -12.04649 -11.87344 -11.80272 -11.35816 -10.87322 -10.77888 -10.36992 -10.17506 -10.10804 -9.99699 -9.32845 -8.83332 -4.98978 -0.19678 -0.06240 0.17020 0.18049 1.27069 1.45519 1.56188 1.71890 1.91306 1.96504 1.98176 2.08829 2.32806 2.76901 2.93570 3.06588 3.29581 3.46746 3.47821 3.48856 3.55220 3.59131 3.68429 3.70833 3.75952 3.79745 3.83817 3.91948 4.01345 4.09830 4.17007 4.25386 4.28831 4.36487 4.48038 4.51275 4.55359 4.57214 4.60382 4.72477 4.74329 4.79431 4.85255 4.91341 4.99588 5.00692 5.09515 5.09849 5.24936 5.34700 5.38744 5.48838 5.58242 5.59409 5.65284 5.97146 6.36282 6.50769 6.53478 7.28626 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.536 6.536 2 C -0.043 4.043 3 Si 0.683 3.317 4 C -0.145 4.145 5 C 0.064 3.936 6 N -0.584 5.584 7 C 0.120 3.880 8 C -0.133 4.133 9 C -0.067 4.067 10 C -0.170 4.170 11 C 0.569 3.431 12 O -0.536 6.536 13 N -0.712 5.712 14 C 0.122 3.878 15 H 0.108 0.892 16 C -0.135 4.135 17 C -0.080 4.080 18 H 0.102 0.898 19 C -0.037 4.037 20 C -0.117 4.117 21 C -0.067 4.067 22 C -0.188 4.188 23 C 0.508 3.492 24 F -0.176 7.176 25 F -0.177 7.177 26 F -0.177 7.177 27 C -0.066 4.066 28 C -0.119 4.119 29 C -0.144 4.144 30 C 0.009 3.991 31 C -0.102 4.102 32 H 0.378 0.622 33 H 0.074 0.926 34 H -0.259 1.259 35 H -0.255 1.255 36 H 0.177 0.823 37 H 0.422 0.578 38 H 0.128 0.872 39 H 0.127 0.873 40 H 0.400 0.600 41 H 0.079 0.921 42 H 0.100 0.900 43 H 0.134 0.866 44 H 0.136 0.864 45 H 0.137 0.863 46 H 0.137 0.863 47 H 0.097 0.903 48 H 0.077 0.923 49 H 0.137 0.863 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 5.796 4.056 3.228 7.776 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.343 6.343 2 C -0.153 4.153 3 Si 0.583 3.417 4 C -0.152 4.152 5 C -0.062 4.062 6 N -0.187 5.187 7 C 0.011 3.989 8 C -0.153 4.153 9 C -0.087 4.087 10 C -0.175 4.175 11 C 0.358 3.642 12 O -0.413 6.413 13 N -0.364 5.364 14 C 0.016 3.984 15 H 0.126 0.874 16 C -0.173 4.173 17 C -0.099 4.099 18 H 0.120 0.880 19 C -0.037 4.037 20 C -0.135 4.135 21 C -0.085 4.085 22 C -0.189 4.189 23 C 0.454 3.546 24 F -0.158 7.158 25 F -0.158 7.158 26 F -0.158 7.158 27 C -0.084 4.084 28 C -0.136 4.136 29 C -0.183 4.183 30 C -0.010 4.010 31 C -0.107 4.107 32 H 0.226 0.774 33 H 0.092 0.908 34 H -0.184 1.184 35 H -0.179 1.179 36 H 0.194 0.806 37 H 0.260 0.740 38 H 0.146 0.854 39 H 0.145 0.855 40 H 0.236 0.764 41 H 0.098 0.902 42 H 0.119 0.881 43 H 0.152 0.848 44 H 0.154 0.846 45 H 0.155 0.845 46 H 0.154 0.846 47 H 0.115 0.885 48 H 0.096 0.904 49 H 0.155 0.845 Dipole moment (debyes) X Y Z Total from point charges 5.370 4.714 3.088 7.784 hybrid contribution -0.879 -0.522 0.550 1.161 sum 4.490 4.192 3.638 7.139 Atomic orbital electron populations 1.86633 1.18081 1.80022 1.49541 1.24076 0.84075 1.10013 0.97105 0.95264 0.91414 0.74331 0.80663 1.19527 1.07858 0.91194 0.96604 1.21684 1.01102 0.94381 0.89064 1.41710 1.54734 1.04121 1.18089 1.18425 0.99877 0.86543 0.94076 1.19658 1.05736 0.88816 1.01099 1.20557 0.96842 0.98290 0.93025 1.19496 1.08493 0.93162 0.96307 1.18174 0.77630 0.82786 0.85638 1.90796 1.44295 1.85952 1.20240 1.45549 1.64707 1.05208 1.20966 1.21813 0.94723 0.84385 0.97487 0.87403 1.23432 0.98007 0.96952 0.98872 1.21717 0.97579 0.91137 0.99427 0.87999 1.19966 0.95155 0.95374 0.93231 1.21070 1.00654 0.93905 0.97897 1.20973 0.95011 0.94965 0.97564 1.19991 1.08629 0.92683 0.97599 1.18324 0.75184 0.87399 0.73738 1.93241 1.34474 1.96962 1.91097 1.93201 1.95380 1.84437 1.42803 1.93198 1.74738 1.83166 1.64747 1.20970 0.96621 0.94652 0.96184 1.21037 0.99422 0.93959 0.99208 1.23588 0.96909 0.98411 0.99376 1.20659 0.92344 0.89191 0.98823 1.18917 1.04497 0.92902 0.94335 0.77445 0.90763 1.18383 1.17917 0.80632 0.74028 0.85392 0.85480 0.76438 0.90202 0.88148 0.84789 0.84612 0.84547 0.84560 0.88472 0.90382 0.84487 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 -1.06 12.86 -35.23 -0.45 -1.52 16 2 C -0.04 -0.01 3.05 36.01 0.11 0.10 16 3 Si 0.68 -1.05 30.79 -169.99 -5.23 -6.29 16 4 C -0.14 -0.20 5.61 -102.68 -0.58 -0.78 16 5 C 0.06 -0.06 10.43 -16.73 -0.17 -0.23 16 6 N -0.58 0.91 6.05 -10.61 -0.06 0.85 16 7 C 0.12 0.07 7.27 -83.95 -0.61 -0.54 16 8 C -0.13 0.12 10.00 -39.86 -0.40 -0.28 16 9 C -0.07 0.06 9.46 -39.54 -0.37 -0.32 16 10 C -0.17 -0.31 5.87 -104.98 -0.62 -0.93 16 11 C 0.57 1.51 7.76 -12.42 -0.10 1.41 16 12 O -0.54 -3.48 15.93 5.30 0.08 -3.39 16 13 N -0.71 0.59 5.22 -54.02 -0.28 0.31 16 14 C 0.12 -0.14 4.32 -67.12 -0.29 -0.43 16 15 H 0.11 0.07 7.46 -51.93 -0.39 -0.32 16 16 C -0.13 0.41 7.29 -25.92 -0.19 0.22 16 17 C -0.08 0.24 3.86 -90.97 -0.35 -0.11 16 18 H 0.10 -0.41 8.09 -51.93 -0.42 -0.83 16 19 C -0.04 0.06 5.29 -104.63 -0.55 -0.49 16 20 C -0.12 0.17 9.71 -39.58 -0.38 -0.21 16 21 C -0.07 0.02 9.40 -39.58 -0.37 -0.35 16 22 C -0.19 -0.13 5.45 -104.62 -0.57 -0.70 16 23 C 0.51 0.92 3.37 36.01 0.12 1.05 16 24 F -0.18 -0.49 17.30 2.25 0.04 -0.45 16 25 F -0.18 -0.42 16.45 2.25 0.04 -0.38 16 26 F -0.18 -0.41 16.46 2.25 0.04 -0.37 16 27 C -0.07 0.02 9.40 -39.58 -0.37 -0.35 16 28 C -0.12 0.16 8.61 -39.58 -0.34 -0.18 16 29 C -0.14 0.26 7.26 -25.92 -0.19 0.07 16 30 C 0.01 0.03 9.64 -38.86 -0.37 -0.35 16 31 C -0.10 -0.26 6.34 -105.16 -0.67 -0.92 16 32 H 0.38 -0.76 8.74 45.56 0.40 -0.36 16 33 H 0.07 -0.04 7.96 -51.93 -0.41 -0.46 16 34 H -0.26 -0.21 7.11 56.52 0.40 0.19 16 35 H -0.25 -0.20 7.04 56.52 0.40 0.20 16 36 H 0.18 -0.62 6.30 -52.49 -0.33 -0.95 16 37 H 0.42 -2.02 8.96 -40.82 -0.37 -2.38 16 38 H 0.13 -0.44 8.06 -52.49 -0.42 -0.86 16 39 H 0.13 -0.51 6.36 -52.49 -0.33 -0.85 16 40 H 0.40 -1.40 6.71 -40.82 -0.27 -1.68 16 41 H 0.08 -0.28 8.14 -51.93 -0.42 -0.70 16 42 H 0.10 -0.32 7.72 -51.93 -0.40 -0.72 16 43 H 0.13 -0.46 8.05 -52.49 -0.42 -0.88 16 44 H 0.14 -0.20 7.60 -52.49 -0.40 -0.60 16 45 H 0.14 -0.18 7.60 -52.48 -0.40 -0.58 16 46 H 0.14 -0.41 6.66 -52.49 -0.35 -0.76 16 47 H 0.10 -0.22 6.31 -51.93 -0.33 -0.55 16 48 H 0.08 -0.06 8.14 -51.93 -0.42 -0.48 16 49 H 0.14 0.53 7.64 -52.49 -0.40 0.13 16 LS Contribution 421.14 15.07 6.35 6.35 Total: 0.00 -10.59 421.14 -12.05 -22.65 By element: Atomic # 1 Polarization: -8.14 SS G_CDS: -5.30 Total: -13.43 kcal Atomic # 6 Polarization: 2.95 SS G_CDS: -7.27 Total: -4.32 kcal Atomic # 7 Polarization: 1.51 SS G_CDS: -0.35 Total: 1.16 kcal Atomic # 8 Polarization: -4.54 SS G_CDS: -0.37 Total: -4.91 kcal Atomic # 9 Polarization: -1.32 SS G_CDS: 0.11 Total: -1.21 kcal Atomic # 14 Polarization: -1.05 SS G_CDS: -5.23 Total: -6.29 kcal Total LS contribution 6.35 Total: 6.35 kcal Total: -10.59 -12.05 -22.65 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9705038_13287722.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -75.590 kcal (2) G-P(sol) polarization free energy of solvation -10.591 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -86.181 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.054 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.646 kcal (6) G-S(sol) free energy of system = (1) + (5) -98.236 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.08 seconds