Wall clock time and date at job start Tue Mar 9 2021 13:32:39 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50702 * 1 3 3 C 1.38978 * 119.95534 * 2 1 4 4 O 1.35708 * 119.91313 * 359.97438 * 3 2 1 5 5 C 1.39011 * 120.17430 * 179.97438 * 3 2 1 6 6 C 1.50698 * 119.95680 * 180.02562 * 5 3 2 7 7 O 1.42897 * 109.47083 * 75.01949 * 6 5 3 8 8 Si 1.86303 * 109.47514 * 195.01858 * 6 5 3 9 9 C 1.37685 * 120.09257 * 0.04132 * 5 3 2 10 10 C 1.39751 * 119.90696 * 359.97438 * 9 5 3 11 11 C 1.47610 * 120.08620 * 180.02562 * 10 9 5 12 12 O 1.21582 * 119.99889 * 359.97438 * 11 10 9 13 13 N 1.34775 * 119.99852 * 179.97438 * 11 10 9 14 14 C 1.46497 * 119.99876 * 179.97438 * 13 11 10 15 15 H 1.09002 * 112.84797 * 23.80851 * 14 13 11 16 16 C 1.53785 * 113.61392 * 155.00302 * 14 13 11 17 17 C 1.53777 * 87.08327 * 89.12061 * 16 14 13 18 18 H 1.09008 * 113.61374 * 270.80464 * 17 16 14 19 19 C 1.50695 * 113.61661 * 139.98290 * 17 16 14 20 20 C 1.38236 * 119.99978 * 121.52952 * 19 17 16 21 21 C 1.38236 * 120.00032 * 179.97438 * 20 19 17 22 22 C 1.38241 * 119.99630 * 359.97438 * 21 20 19 23 23 C 1.50703 * 119.99713 * 179.97438 * 22 21 20 24 24 F 1.39905 * 109.47157 * 89.99981 * 23 22 21 25 25 F 1.39900 * 109.47159 * 330.00282 * 23 22 21 26 26 F 1.39897 * 109.47274 * 209.99973 * 23 22 21 27 27 C 1.38228 * 120.00274 * 0.25422 * 22 21 20 28 28 C 1.38234 * 120.00102 * 359.46826 * 27 22 21 29 29 C 1.53781 * 87.17114 * 25.38800 * 17 16 14 30 30 C 1.37726 * 119.95301 * 180.28258 * 2 1 3 31 31 H 1.08991 * 109.47315 * 89.99748 * 1 2 3 32 32 H 1.09003 * 109.46880 * 209.99962 * 1 2 3 33 33 H 1.08999 * 109.47062 * 329.99485 * 1 2 3 34 34 H 0.96707 * 113.99820 * 269.98078 * 4 3 2 35 35 H 1.08996 * 109.47092 * 315.02065 * 6 5 3 36 36 H 0.96702 * 114.00138 * 300.00049 * 7 6 5 37 37 H 1.48500 * 109.99549 * 59.99878 * 8 6 5 38 38 H 1.48491 * 110.00090 * 181.31883 * 8 6 5 39 39 H 1.07994 * 120.05044 * 179.97438 * 9 5 3 40 40 H 0.97004 * 120.00029 * 0.02562 * 13 11 10 41 41 H 1.09005 * 113.61208 * 334.56824 * 16 14 13 42 42 H 1.09006 * 113.68964 * 203.67944 * 16 14 13 43 43 H 1.07994 * 119.99948 * 359.97438 * 20 19 17 44 44 H 1.07999 * 120.00434 * 179.97438 * 21 20 19 45 45 H 1.08004 * 120.00534 * 179.72491 * 27 22 21 46 46 H 1.07999 * 120.00605 * 180.27685 * 28 27 22 47 47 H 1.09003 * 113.60998 * 89.16337 * 29 17 16 48 48 H 1.08999 * 113.61515 * 220.05998 * 29 17 16 49 49 H 1.07991 * 120.04892 * 0.02562 * 30 2 1 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.2010 1.2041 0.0000 4 8 1.5197 2.3778 -0.0005 5 6 3.5911 1.2094 0.0005 6 6 4.3386 2.5180 0.0011 7 8 4.2720 3.1040 1.3027 8 14 6.1199 2.2159 -0.4534 9 6 4.2860 0.0208 0.0002 10 6 3.5918 -1.1921 -0.0001 11 6 4.3328 -2.4688 0.0001 12 8 5.5487 -2.4659 0.0001 13 7 3.6616 -3.6375 0.0003 14 6 4.3970 -4.9045 0.0000 15 1 5.4045 -4.8092 0.4051 16 6 3.6020 -6.0784 0.5957 17 6 3.0625 -6.3299 -0.8222 18 1 2.1496 -5.7780 -1.0464 19 6 2.9664 -7.7903 -1.1813 20 6 1.7483 -8.3343 -1.5437 21 6 1.6602 -9.6738 -1.8736 22 6 2.7904 -10.4692 -1.8416 23 6 2.6943 -11.9297 -2.2007 24 9 2.9076 -12.0872 -3.5744 25 9 1.4227 -12.4090 -1.8683 26 9 3.6634 -12.6487 -1.4929 27 6 4.0075 -9.9264 -1.4747 28 6 4.0967 -8.5856 -1.1503 29 6 4.3381 -5.6493 -1.3461 30 6 2.1947 -1.1933 -0.0059 31 1 -0.3633 0.0000 -1.0276 32 1 -0.3633 -0.8900 0.5138 33 1 -0.3633 0.8899 0.5139 34 1 1.3229 2.7180 -0.8842 35 1 3.8879 3.1942 -0.7253 36 1 3.3723 3.2892 1.6051 37 1 6.2027 1.6065 -1.8051 38 1 6.8750 3.4942 -0.4254 39 1 5.3659 0.0257 0.0002 40 1 2.6916 -3.6397 -0.0001 41 1 2.8351 -5.7703 1.3064 42 1 4.2297 -6.8855 0.9735 43 1 0.8655 -7.7128 -1.5691 44 1 0.7085 -10.0989 -2.1564 45 1 4.8897 -10.5488 -1.4453 46 1 5.0484 -8.1604 -0.8679 47 1 5.1685 -6.3383 -1.5007 48 1 4.1646 -4.9954 -2.2007 49 1 1.6548 -2.1285 -0.0109 There are 74 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 74 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_9705038_13287732.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:32:39 Heat of formation + Delta-G solvation = -181.200531 kcal Electronic energy + Delta-G solvation = -37360.014664 eV Core-core repulsion = 31804.478489 eV Total energy + Delta-G solvation = -5555.536175 eV No. of doubly occupied orbitals = 74 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 408.138 amu Computer time = 1.08 seconds Orbital eigenvalues (eV) -51.22501 -48.74944 -48.70238 -41.91646 -41.29515 -40.32284 -38.94634 -37.74885 -37.53827 -34.89428 -33.97595 -32.87251 -32.09522 -31.50278 -28.02299 -27.90690 -26.87567 -26.67710 -25.51876 -24.50908 -23.89801 -22.47198 -22.12838 -21.58597 -20.23076 -19.58298 -19.52297 -19.50981 -19.39198 -18.87648 -18.05963 -17.69111 -17.23109 -16.76660 -16.56662 -16.35289 -16.05513 -16.02410 -15.83825 -15.54531 -15.51945 -15.37858 -15.17801 -15.14962 -14.94704 -14.86533 -14.82446 -14.57578 -14.46304 -14.37590 -14.26184 -14.13913 -14.03269 -13.72345 -13.45830 -13.33653 -13.24953 -12.91546 -12.80432 -12.76527 -12.36184 -12.28187 -12.13578 -11.89365 -11.75752 -11.35727 -11.23588 -11.18446 -11.02651 -10.19324 -10.04351 -9.95316 -9.91154 -9.66644 -4.94598 -0.41893 -0.11706 0.07729 0.28978 1.27456 1.51155 1.62057 1.62950 1.82423 2.00142 2.42544 2.56373 2.69881 2.97654 3.05114 3.36146 3.38574 3.45981 3.55310 3.62443 3.65520 3.73025 3.85088 3.85426 3.90043 3.98018 4.01941 4.06102 4.21597 4.31084 4.32917 4.39425 4.41278 4.61464 4.67115 4.69542 4.70694 4.80716 4.81832 4.86745 4.88288 5.02233 5.02913 5.05854 5.09857 5.16095 5.20560 5.20643 5.22032 5.30520 5.47074 5.58612 5.64495 5.79485 6.44970 6.56437 6.63968 7.12938 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.112 4.112 2 C -0.117 4.117 3 C 0.145 3.855 4 O -0.497 6.497 5 C -0.155 4.155 6 C -0.067 4.067 7 O -0.547 6.547 8 Si 0.774 3.226 9 C -0.058 4.058 10 C -0.148 4.148 11 C 0.562 3.438 12 O -0.572 6.572 13 N -0.693 5.693 14 C 0.113 3.887 15 H 0.089 0.911 16 C -0.124 4.124 17 C -0.070 4.070 18 H 0.121 0.879 19 C -0.038 4.038 20 C -0.117 4.117 21 C -0.078 4.078 22 C -0.203 4.203 23 C 0.505 3.495 24 F -0.185 7.185 25 F -0.182 7.182 26 F -0.183 7.183 27 C -0.078 4.078 28 C -0.121 4.121 29 C -0.143 4.143 30 C -0.056 4.056 31 H 0.085 0.915 32 H 0.086 0.914 33 H 0.070 0.930 34 H 0.413 0.587 35 H 0.085 0.915 36 H 0.378 0.622 37 H -0.269 1.269 38 H -0.287 1.287 39 H 0.137 0.863 40 H 0.415 0.585 41 H 0.092 0.908 42 H 0.103 0.897 43 H 0.158 0.842 44 H 0.142 0.858 45 H 0.140 0.860 46 H 0.151 0.849 47 H 0.099 0.901 48 H 0.070 0.930 49 H 0.166 0.834 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -7.094 1.167 -0.035 7.190 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.168 4.168 2 C -0.117 4.117 3 C 0.099 3.901 4 O -0.311 6.311 5 C -0.156 4.156 6 C -0.177 4.177 7 O -0.355 6.355 8 Si 0.677 3.323 9 C -0.077 4.077 10 C -0.151 4.151 11 C 0.350 3.650 12 O -0.452 6.452 13 N -0.345 5.345 14 C 0.008 3.992 15 H 0.108 0.892 16 C -0.162 4.162 17 C -0.088 4.088 18 H 0.139 0.861 19 C -0.038 4.038 20 C -0.134 4.134 21 C -0.096 4.096 22 C -0.204 4.204 23 C 0.451 3.549 24 F -0.166 7.166 25 F -0.163 7.163 26 F -0.164 7.164 27 C -0.096 4.096 28 C -0.138 4.138 29 C -0.181 4.181 30 C -0.075 4.075 31 H 0.103 0.897 32 H 0.104 0.896 33 H 0.089 0.911 34 H 0.274 0.726 35 H 0.103 0.897 36 H 0.227 0.773 37 H -0.195 1.195 38 H -0.214 1.214 39 H 0.154 0.846 40 H 0.254 0.746 41 H 0.110 0.890 42 H 0.122 0.878 43 H 0.176 0.824 44 H 0.160 0.840 45 H 0.158 0.842 46 H 0.169 0.831 47 H 0.117 0.883 48 H 0.089 0.911 49 H 0.183 0.817 Dipole moment (debyes) X Y Z Total from point charges -4.949 1.179 -0.046 5.088 hybrid contribution -1.612 0.253 -1.072 1.952 sum -6.561 1.432 -1.118 6.808 Atomic orbital electron populations 1.20772 0.88082 1.04291 1.03672 1.20439 0.98364 0.91693 1.01228 1.18421 0.88383 0.86188 0.97068 1.84668 1.75490 1.35480 1.35464 1.20586 0.94181 0.95883 1.04952 1.25207 1.12292 0.91588 0.88575 1.86712 1.33927 1.82905 1.31912 0.91923 0.75412 0.82592 0.82403 1.21005 1.00057 0.90920 0.95710 1.19840 0.94452 0.92610 1.08237 1.18319 0.86808 0.84438 0.75429 1.90799 1.15127 1.88003 1.51262 1.45431 1.10792 1.04169 1.74103 1.21942 0.97027 0.82540 0.97737 0.89245 1.23392 1.00066 0.96866 0.95854 1.21730 0.99685 0.90517 0.96835 0.86062 1.20151 0.92950 0.95978 0.94717 1.21355 0.98802 0.94177 0.99097 1.21165 0.97444 0.94500 0.96490 1.20028 0.98082 0.91027 1.11290 1.18553 0.73324 0.88690 0.74297 1.93218 1.94580 1.96527 1.32323 1.93182 1.40770 1.90120 1.92264 1.93181 1.63814 1.80766 1.78648 1.21117 0.96210 0.96542 0.95760 1.21250 0.99980 0.92366 1.00253 1.23605 0.98123 0.99122 0.97292 1.21396 0.91554 0.99193 0.95341 0.89669 0.89554 0.91059 0.72626 0.89735 0.77263 1.19489 1.21391 0.84565 0.74585 0.88956 0.87831 0.82439 0.84020 0.84238 0.83146 0.88254 0.91130 0.81675 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.11 1.02 9.78 71.24 0.70 1.71 16 2 C -0.12 0.57 5.89 -19.81 -0.12 0.46 16 3 C 0.14 -0.32 6.62 22.63 0.15 -0.17 16 4 O -0.50 2.59 11.41 -90.29 -1.03 1.56 16 5 C -0.16 -0.17 5.27 -19.81 -0.10 -0.27 16 6 C -0.07 -0.12 2.33 71.24 0.17 0.05 16 7 O -0.55 -2.17 12.65 -148.98 -1.89 -4.06 16 8 Si 0.77 2.84 30.17 68.60 2.07 4.91 16 9 C -0.06 -0.17 8.20 22.50 0.18 0.01 16 10 C -0.15 -0.02 5.88 -20.08 -0.12 -0.14 16 11 C 0.56 1.28 7.76 86.72 0.67 1.95 16 12 O -0.57 -6.19 15.94 -3.97 -0.06 -6.26 16 13 N -0.69 3.77 5.21 -442.85 -2.31 1.46 16 14 C 0.11 -0.60 4.33 45.58 0.20 -0.40 16 15 H 0.09 -0.04 7.46 -2.39 -0.02 -0.06 16 16 C -0.12 1.21 7.29 31.12 0.23 1.43 16 17 C -0.07 0.69 3.85 -11.02 -0.04 0.65 16 18 H 0.12 -1.64 8.09 -2.38 -0.02 -1.66 16 19 C -0.04 0.24 5.29 -19.87 -0.11 0.14 16 20 C -0.12 0.69 9.71 22.27 0.22 0.90 16 21 C -0.08 0.17 9.40 22.27 0.21 0.38 16 22 C -0.20 -0.15 5.45 -19.87 -0.11 -0.26 16 23 C 0.51 1.90 3.37 71.24 0.24 2.14 16 24 F -0.19 -1.08 17.30 44.97 0.78 -0.31 16 25 F -0.18 -0.85 16.46 44.97 0.74 -0.11 16 26 F -0.18 -0.92 16.46 44.97 0.74 -0.18 16 27 C -0.08 0.11 9.40 22.27 0.21 0.32 16 28 C -0.12 0.58 8.54 22.27 0.19 0.77 16 29 C -0.14 0.96 7.27 31.18 0.23 1.19 16 30 C -0.06 0.33 9.18 22.51 0.21 0.54 16 31 H 0.08 -0.94 8.14 -2.39 -0.02 -0.96 16 32 H 0.09 -1.00 8.09 -2.39 -0.02 -1.02 16 33 H 0.07 -0.50 7.52 -2.39 -0.02 -0.52 16 34 H 0.41 -5.40 9.06 -74.05 -0.67 -6.07 16 35 H 0.09 -0.10 7.82 -2.39 -0.02 -0.12 16 36 H 0.38 -0.19 8.60 -74.06 -0.64 -0.82 16 37 H -0.27 -1.80 7.11 99.48 0.71 -1.10 16 38 H -0.29 -2.69 7.11 99.48 0.71 -1.98 16 39 H 0.14 0.55 4.70 -2.91 -0.01 0.53 16 40 H 0.42 -5.04 6.72 -92.71 -0.62 -5.66 16 41 H 0.09 -1.06 8.14 -2.38 -0.02 -1.08 16 42 H 0.10 -0.99 7.65 -2.38 -0.02 -1.01 16 43 H 0.16 -1.74 8.05 -2.91 -0.02 -1.77 16 44 H 0.14 -0.59 7.60 -2.91 -0.02 -0.61 16 45 H 0.14 -0.41 7.60 -2.91 -0.02 -0.43 16 46 H 0.15 -1.24 6.73 -2.91 -0.02 -1.26 16 47 H 0.10 -0.69 6.39 -2.39 -0.02 -0.70 16 48 H 0.07 -0.33 8.14 -2.39 -0.02 -0.35 16 49 H 0.17 -2.23 6.39 -2.92 -0.02 -2.25 16 Total: 0.00 -21.91 417.51 1.42 -20.50 By element: Atomic # 1 Polarization: -28.09 SS G_CDS: -0.82 Total: -28.91 kcal Atomic # 6 Polarization: 8.20 SS G_CDS: 3.20 Total: 11.39 kcal Atomic # 7 Polarization: 3.77 SS G_CDS: -2.31 Total: 1.46 kcal Atomic # 8 Polarization: -5.78 SS G_CDS: -2.98 Total: -8.75 kcal Atomic # 9 Polarization: -2.85 SS G_CDS: 2.26 Total: -0.60 kcal Atomic # 14 Polarization: 2.84 SS G_CDS: 2.07 Total: 4.91 kcal Total: -21.91 1.42 -20.50 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9705038_13287732.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -160.704 kcal (2) G-P(sol) polarization free energy of solvation -21.914 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -182.618 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.418 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.497 kcal (6) G-S(sol) free energy of system = (1) + (5) -181.201 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.08 seconds