Wall clock time and date at job start Tue Mar 9 2021 13:33:44 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42896 * 1 3 3 Si 1.86304 * 109.47174 * 2 1 4 4 C 1.50704 * 109.46940 * 119.99855 * 2 1 3 5 5 C 1.31116 * 118.54427 * 249.97664 * 4 2 1 6 6 N 1.38929 * 121.84698 * 179.61970 * 5 4 2 7 7 C 1.47030 * 118.88333 * 13.31333 * 6 5 4 8 8 C 1.50696 * 109.82235 * 196.79693 * 7 6 5 9 9 O 1.21289 * 119.99722 * 18.20935 * 8 7 6 10 10 N 1.34769 * 120.00200 * 198.20662 * 8 7 6 11 11 C 1.46504 * 120.00064 * 179.97438 * 10 8 7 12 12 H 1.08998 * 112.84991 * 336.20071 * 11 10 8 13 13 C 1.53785 * 113.61430 * 107.50666 * 11 10 8 14 14 C 1.53781 * 87.08193 * 89.11506 * 13 11 10 15 15 H 1.09001 * 113.69337 * 270.87425 * 14 13 11 16 16 C 1.50693 * 113.61485 * 139.98228 * 14 13 11 17 17 C 1.38233 * 120.00207 * 142.49943 * 16 14 13 18 18 C 1.38234 * 120.00037 * 179.72405 * 17 16 14 19 19 C 1.38234 * 120.00240 * 0.26327 * 18 17 16 20 20 C 1.50701 * 120.00243 * 180.02562 * 19 18 17 21 21 F 1.39899 * 109.47100 * 89.99820 * 20 19 18 22 22 F 1.39902 * 109.47282 * 209.99784 * 20 19 18 23 23 F 1.39899 * 109.46882 * 329.99960 * 20 19 18 24 24 C 1.38238 * 119.99693 * 359.97438 * 19 18 17 25 25 C 1.38234 * 120.00082 * 0.02562 * 24 19 18 26 26 C 1.53777 * 113.61731 * 205.00186 * 11 10 8 27 27 C 1.53541 * 107.65776 * 316.33883 * 7 6 5 28 28 C 1.50201 * 118.54807 * 70.00331 * 4 2 1 29 29 H 0.96704 * 113.99682 * 300.00665 * 1 2 3 30 30 H 1.08998 * 109.47098 * 239.99841 * 2 1 3 31 31 H 1.48500 * 109.99887 * 299.99583 * 3 2 1 32 32 H 1.48499 * 110.00133 * 61.31758 * 3 2 1 33 33 H 1.08003 * 119.07628 * 359.64060 * 5 4 2 34 34 H 0.97001 * 120.55819 * 193.34180 * 6 5 4 35 35 H 1.09002 * 109.87365 * 75.90470 * 7 6 5 36 36 H 0.96994 * 120.00273 * 0.02562 * 10 8 7 37 37 H 1.09007 * 113.61113 * 334.56927 * 13 11 10 38 38 H 1.08991 * 113.61696 * 203.66942 * 13 11 10 39 39 H 1.08002 * 120.00157 * 0.02562 * 17 16 14 40 40 H 1.07999 * 120.00009 * 180.28389 * 18 17 16 41 41 H 1.08001 * 119.99643 * 179.97438 * 24 19 18 42 42 H 1.07999 * 120.00025 * 179.97438 * 25 24 19 43 43 H 1.08993 * 113.61768 * 156.33816 * 26 11 10 44 44 H 1.09001 * 113.61078 * 25.43350 * 26 11 10 45 45 H 1.09004 * 109.62146 * 180.67181 * 27 7 6 46 46 H 1.08997 * 109.62129 * 301.03660 * 27 7 6 47 47 H 1.08994 * 109.33149 * 79.76521 * 28 4 2 48 48 H 1.09008 * 109.32548 * 320.28576 * 28 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9313 -0.7104 1.2305 5 6 2.5119 -0.0028 2.1693 6 7 2.9931 -0.5858 3.3349 7 6 3.1183 -2.0494 3.3977 8 6 3.2525 -2.4898 4.8326 9 8 2.9218 -1.7433 5.7295 10 7 3.7399 -3.7131 5.1193 11 6 3.8709 -4.1410 6.5143 12 1 3.9479 -3.3040 7.2083 13 6 2.8363 -5.1986 6.9340 14 6 3.8436 -6.2588 6.4585 15 1 3.7397 -6.5205 5.4055 16 6 3.9184 -7.4663 7.3569 17 6 4.0870 -8.7249 6.8107 18 6 4.1612 -9.8320 7.6352 19 6 4.0614 -9.6811 9.0056 20 6 4.1430 -10.8879 9.9046 21 9 5.4766 -11.1141 10.2617 22 9 3.3832 -10.6628 11.0575 23 9 3.6449 -12.0071 9.2289 24 6 3.8879 -8.4230 9.5516 25 6 3.8136 -7.3159 8.7271 26 6 4.9450 -5.2203 6.7294 27 6 1.8463 -2.6524 2.7847 28 6 1.7451 -2.1977 1.3270 29 1 -0.3933 0.4418 0.7650 30 1 1.7923 -0.5138 -0.8900 31 1 1.5615 2.4679 -1.2086 32 1 1.5879 2.4586 1.2242 33 1 2.6188 1.0632 2.0328 34 1 3.2418 -0.0365 4.0948 35 1 3.9909 -2.3714 2.8292 36 1 4.0047 -4.3100 4.4021 37 1 1.9201 -5.1712 6.3441 38 1 2.6492 -5.2244 8.0074 39 1 4.1656 -8.8428 5.7400 40 1 4.2976 -10.8148 7.2087 41 1 3.8095 -8.3052 10.6223 42 1 3.6776 -6.3331 9.1536 43 1 5.3343 -5.2522 7.7469 44 1 5.7311 -5.2105 5.9744 45 1 1.9003 -3.7404 2.8259 46 1 0.9738 -2.3081 3.3399 47 1 2.5155 -2.6966 0.7391 48 1 0.7645 -2.4648 0.9329 There are 70 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 70 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_9705038_15413834.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:33:44 Heat of formation + Delta-G solvation = -142.145190 kcal Electronic energy + Delta-G solvation = -34235.347135 eV Core-core repulsion = 29035.675470 eV Total energy + Delta-G solvation = -5199.671665 eV No. of doubly occupied orbitals = 70 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 383.150 amu Computer time = 0.80 seconds Orbital eigenvalues (eV) -51.11003 -48.62954 -48.57146 -41.98053 -41.06205 -39.85358 -38.91900 -37.41635 -34.99023 -33.31137 -33.26417 -32.53450 -32.21113 -28.30429 -27.36190 -26.99719 -25.57850 -25.08270 -24.23259 -23.73207 -22.59161 -22.01845 -20.47082 -19.62219 -19.49176 -19.43093 -19.32226 -19.12082 -18.25302 -17.54337 -17.07115 -16.86090 -16.54787 -16.35530 -16.07164 -15.99265 -15.73712 -15.49078 -15.45735 -15.32387 -15.28868 -15.04805 -14.89893 -14.82118 -14.72774 -14.69192 -14.51668 -14.45138 -14.27431 -14.12711 -13.90801 -13.72132 -13.41214 -13.18910 -12.94426 -12.84888 -12.58863 -12.26417 -12.14528 -12.03333 -12.00587 -11.66189 -11.49471 -11.29483 -10.94464 -10.33131 -10.29991 -10.21941 -10.09334 -8.53547 -4.91777 -0.26379 0.10642 1.26684 1.36512 1.41407 1.60215 1.67064 1.70202 2.03227 2.25839 2.52605 2.72077 3.01601 3.16464 3.32968 3.37333 3.42232 3.46228 3.55906 3.59604 3.65072 3.69672 3.71620 3.78086 3.91466 3.91733 4.10006 4.20814 4.21512 4.29601 4.37915 4.45737 4.50015 4.51202 4.58401 4.61745 4.62721 4.71547 4.74879 4.78340 4.85686 4.96464 5.01784 5.03434 5.10232 5.21529 5.26416 5.38188 5.50398 5.58515 6.11318 6.28444 6.57522 6.75311 6.95785 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.536 6.536 2 C -0.050 4.050 3 Si 0.666 3.334 4 C -0.275 4.275 5 C 0.138 3.862 6 N -0.731 5.731 7 C 0.136 3.864 8 C 0.516 3.484 9 O -0.527 6.527 10 N -0.709 5.709 11 C 0.119 3.881 12 H 0.108 0.892 13 C -0.144 4.144 14 C -0.079 4.079 15 H 0.103 0.897 16 C -0.039 4.039 17 C -0.117 4.117 18 C -0.067 4.067 19 C -0.187 4.187 20 C 0.508 3.492 21 F -0.176 7.176 22 F -0.177 7.177 23 F -0.177 7.177 24 C -0.066 4.066 25 C -0.119 4.119 26 C -0.134 4.134 27 C -0.126 4.126 28 C -0.054 4.054 29 H 0.373 0.627 30 H 0.109 0.891 31 H -0.261 1.261 32 H -0.265 1.265 33 H 0.135 0.865 34 H 0.409 0.591 35 H 0.093 0.907 36 H 0.404 0.596 37 H 0.077 0.923 38 H 0.097 0.903 39 H 0.135 0.865 40 H 0.137 0.863 41 H 0.137 0.863 42 H 0.136 0.864 43 H 0.101 0.899 44 H 0.080 0.920 45 H 0.078 0.922 46 H 0.075 0.925 47 H 0.068 0.932 48 H 0.078 0.922 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.021 -0.397 -2.183 4.593 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.342 6.342 2 C -0.161 4.161 3 Si 0.570 3.430 4 C -0.285 4.285 5 C 0.018 3.982 6 N -0.364 5.364 7 C 0.027 3.973 8 C 0.301 3.699 9 O -0.403 6.403 10 N -0.361 5.361 11 C 0.014 3.986 12 H 0.126 0.874 13 C -0.182 4.182 14 C -0.098 4.098 15 H 0.121 0.879 16 C -0.039 4.039 17 C -0.135 4.135 18 C -0.085 4.085 19 C -0.188 4.188 20 C 0.453 3.547 21 F -0.158 7.158 22 F -0.158 7.158 23 F -0.158 7.158 24 C -0.084 4.084 25 C -0.137 4.137 26 C -0.172 4.172 27 C -0.165 4.165 28 C -0.091 4.091 29 H 0.220 0.780 30 H 0.127 0.873 31 H -0.186 1.186 32 H -0.190 1.190 33 H 0.152 0.848 34 H 0.246 0.754 35 H 0.111 0.889 36 H 0.239 0.761 37 H 0.096 0.904 38 H 0.116 0.884 39 H 0.153 0.847 40 H 0.154 0.846 41 H 0.155 0.845 42 H 0.154 0.846 43 H 0.119 0.881 44 H 0.099 0.901 45 H 0.097 0.903 46 H 0.093 0.907 47 H 0.087 0.913 48 H 0.096 0.904 Dipole moment (debyes) X Y Z Total from point charges 3.684 0.524 -2.073 4.259 hybrid contribution -0.861 -0.625 0.704 1.276 sum 2.823 -0.102 -1.369 3.139 Atomic orbital electron populations 1.86572 1.18690 1.79815 1.49151 1.24670 0.83321 1.09299 0.98818 0.95429 0.92177 0.75722 0.79716 1.20906 1.11049 0.96801 0.99762 1.20511 0.94100 0.96885 0.86753 1.44277 1.72534 1.04058 1.15534 1.20998 1.00184 0.83613 0.92501 1.20646 0.76522 0.81555 0.91157 1.90748 1.48050 1.53229 1.48225 1.45603 1.65683 1.16651 1.08148 1.21867 0.96310 0.97043 0.83397 0.87442 1.23581 0.97786 0.94217 1.02632 1.21712 0.97815 0.91265 0.98970 0.87905 1.19944 0.95543 0.94476 0.93937 1.21071 1.00709 0.91370 1.00309 1.20982 0.95791 1.00216 0.91479 1.20000 1.11232 0.93030 0.94545 1.18320 0.73932 0.83351 0.79055 1.93241 1.34786 1.95282 1.92445 1.93204 1.76131 1.94576 1.51895 1.93202 1.87551 1.55195 1.79867 1.20971 0.95670 0.90855 1.00923 1.21026 1.00910 0.98904 0.92814 1.23428 0.96369 0.93536 1.03858 1.21864 0.96597 1.00406 0.97610 1.19963 1.02595 0.92082 0.94504 0.78016 0.87342 1.18580 1.19027 0.84842 0.75382 0.88921 0.76145 0.90402 0.88423 0.84741 0.84553 0.84531 0.84623 0.88092 0.90100 0.90343 0.90653 0.91341 0.90384 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 -0.92 12.88 -35.23 -0.45 -1.38 16 2 C -0.05 0.01 2.81 36.01 0.10 0.11 16 3 Si 0.67 -0.49 29.95 -169.99 -5.09 -5.58 16 4 C -0.27 0.17 5.37 -101.34 -0.54 -0.38 16 5 C 0.14 -0.12 9.62 -16.08 -0.15 -0.27 16 6 N -0.73 0.54 5.47 -55.34 -0.30 0.23 16 7 C 0.14 -0.27 3.36 -68.51 -0.23 -0.50 16 8 C 0.52 -0.37 7.10 -10.99 -0.08 -0.45 16 9 O -0.53 -1.79 15.66 5.55 0.09 -1.70 16 10 N -0.71 2.45 5.26 -53.02 -0.28 2.17 16 11 C 0.12 -0.36 4.32 -67.12 -0.29 -0.65 16 12 H 0.11 -0.12 7.46 -51.93 -0.39 -0.51 16 13 C -0.14 0.47 7.25 -25.92 -0.19 0.29 16 14 C -0.08 0.33 3.86 -90.96 -0.35 -0.02 16 15 H 0.10 -0.55 8.09 -51.93 -0.42 -0.97 16 16 C -0.04 0.10 5.29 -104.63 -0.55 -0.45 16 17 C -0.12 0.26 9.71 -39.58 -0.38 -0.13 16 18 C -0.07 0.06 9.40 -39.58 -0.37 -0.31 16 19 C -0.19 -0.02 5.45 -104.62 -0.57 -0.59 16 20 C 0.51 0.69 3.36 36.01 0.12 0.81 16 21 F -0.18 -0.40 17.30 2.25 0.04 -0.36 16 22 F -0.18 -0.35 16.46 2.25 0.04 -0.31 16 23 F -0.18 -0.34 16.46 2.25 0.04 -0.31 16 24 C -0.07 0.06 9.40 -39.58 -0.37 -0.31 16 25 C -0.12 0.25 8.62 -39.58 -0.34 -0.09 16 26 C -0.13 0.59 7.29 -25.92 -0.19 0.40 16 27 C -0.13 0.25 5.47 -26.43 -0.14 0.10 16 28 C -0.05 0.07 5.85 -28.10 -0.16 -0.10 16 29 H 0.37 -0.31 8.70 45.56 0.40 0.09 16 30 H 0.11 -0.07 7.96 -51.93 -0.41 -0.48 16 31 H -0.26 -0.77 7.11 56.52 0.40 -0.37 16 32 H -0.26 -0.32 6.84 56.52 0.39 0.07 16 33 H 0.13 -0.24 4.30 -52.48 -0.23 -0.47 16 34 H 0.41 -0.16 8.08 -40.82 -0.33 -0.49 16 35 H 0.09 -0.35 8.14 -51.93 -0.42 -0.77 16 36 H 0.40 -2.44 8.70 -40.82 -0.36 -2.79 16 37 H 0.08 -0.18 8.14 -51.93 -0.42 -0.61 16 38 H 0.10 -0.33 6.30 -51.93 -0.33 -0.66 16 39 H 0.13 -0.56 8.05 -52.49 -0.42 -0.99 16 40 H 0.14 -0.27 7.60 -52.49 -0.40 -0.67 16 41 H 0.14 -0.26 7.60 -52.49 -0.40 -0.66 16 42 H 0.14 -0.52 6.64 -52.49 -0.35 -0.87 16 43 H 0.10 -0.43 7.73 -51.93 -0.40 -0.84 16 44 H 0.08 -0.39 8.14 -51.93 -0.42 -0.81 16 45 H 0.08 -0.30 8.14 -51.93 -0.42 -0.72 16 46 H 0.07 0.01 8.14 -51.93 -0.42 -0.41 16 47 H 0.07 -0.15 8.14 -51.93 -0.42 -0.58 16 48 H 0.08 -0.01 8.14 -51.92 -0.42 -0.44 16 LS Contribution 401.17 15.07 6.05 6.05 Total: 0.00 -7.87 401.17 -10.79 -18.67 By element: Atomic # 1 Polarization: -8.74 SS G_CDS: -6.21 Total: -14.95 kcal Atomic # 6 Polarization: 2.17 SS G_CDS: -4.71 Total: -2.53 kcal Atomic # 7 Polarization: 2.98 SS G_CDS: -0.58 Total: 2.40 kcal Atomic # 8 Polarization: -2.71 SS G_CDS: -0.37 Total: -3.08 kcal Atomic # 9 Polarization: -1.09 SS G_CDS: 0.11 Total: -0.98 kcal Atomic # 14 Polarization: -0.49 SS G_CDS: -5.09 Total: -5.58 kcal Total LS contribution 6.05 Total: 6.05 kcal Total: -7.87 -10.79 -18.67 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9705038_15413834.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -123.478 kcal (2) G-P(sol) polarization free energy of solvation -7.874 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -131.352 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.793 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.667 kcal (6) G-S(sol) free energy of system = (1) + (5) -142.145 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.80 seconds