Wall clock time and date at job start Tue Mar 9 2021 13:35:50 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42901 * 1 3 3 Si 1.86298 * 109.46997 * 2 1 4 4 C 1.50699 * 109.46830 * 240.00466 * 2 1 3 5 5 C 1.38250 * 119.94218 * 119.72225 * 4 2 1 6 6 C 1.38233 * 120.04414 * 179.76810 * 5 4 2 7 7 Br 1.89107 * 120.03420 * 180.25278 * 6 5 4 8 8 C 1.38788 * 119.93242 * 0.50689 * 6 5 4 9 9 O 1.35918 * 120.06313 * 179.72065 * 8 6 5 10 10 C 1.42900 * 116.99837 * 180.02562 * 9 8 6 11 11 C 1.50704 * 109.46633 * 180.02562 * 10 9 8 12 12 O 1.21276 * 119.99999 * 0.02562 * 11 10 9 13 13 N 1.34777 * 119.99748 * 179.97438 * 11 10 9 14 14 C 1.46502 * 120.00165 * 179.97438 * 13 11 10 15 15 H 1.09000 * 112.84710 * 25.33407 * 14 13 11 16 16 C 1.53774 * 113.61521 * 156.52942 * 14 13 11 17 17 C 1.53777 * 87.08050 * 89.11825 * 16 14 13 18 18 H 1.09000 * 113.61682 * 270.88063 * 17 16 14 19 19 C 1.50706 * 113.61373 * 140.06307 * 17 16 14 20 20 C 1.38227 * 120.00126 * 299.72568 * 19 17 16 21 21 C 1.38237 * 120.00239 * 179.80793 * 20 19 17 22 22 C 1.38239 * 119.99780 * 0.40573 * 21 20 19 23 23 C 1.50697 * 120.00087 * 179.83242 * 22 21 20 24 24 F 1.39899 * 109.47222 * 270.01599 * 23 22 21 25 25 F 1.39901 * 109.47320 * 30.01833 * 23 22 21 26 26 F 1.39900 * 109.46950 * 150.01960 * 23 22 21 27 27 C 1.38239 * 119.99766 * 359.84928 * 22 21 20 28 28 C 1.38236 * 120.00117 * 359.96161 * 27 22 21 29 29 C 1.53775 * 113.61623 * 254.14008 * 14 13 11 30 30 C 1.38727 * 119.88081 * 359.75049 * 8 6 5 31 31 C 1.38146 * 119.94868 * 359.97438 * 30 8 6 32 32 H 0.96708 * 114.00246 * 59.99398 * 1 2 3 33 33 H 1.08991 * 109.47274 * 120.00272 * 2 1 3 34 34 H 1.48506 * 109.99834 * 60.00805 * 3 2 1 35 35 H 1.48502 * 110.00011 * 181.32069 * 3 2 1 36 36 H 1.08004 * 119.97264 * 0.02562 * 5 4 2 37 37 H 1.09001 * 109.47297 * 300.00264 * 10 9 8 38 38 H 1.09000 * 109.47177 * 60.01064 * 10 9 8 39 39 H 0.97001 * 119.99907 * 0.02562 * 13 11 10 40 40 H 1.08996 * 113.61635 * 203.66499 * 16 14 13 41 41 H 1.09000 * 113.62055 * 334.57341 * 16 14 13 42 42 H 1.08006 * 120.00359 * 0.02562 * 20 19 17 43 43 H 1.07998 * 120.00326 * 180.23472 * 21 20 19 44 44 H 1.08004 * 119.99586 * 179.97438 * 27 22 21 45 45 H 1.07994 * 119.99837 * 180.02562 * 28 27 22 46 46 H 1.09002 * 113.61797 * 25.43210 * 29 14 13 47 47 H 1.08998 * 113.61488 * 156.32940 * 29 14 13 48 48 H 1.07995 * 120.02178 * 180.02562 * 30 8 6 49 49 H 1.08007 * 119.95906 * 179.97438 * 31 30 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9313 -0.7103 -1.2305 5 6 2.7212 -0.0356 -2.1427 6 6 3.1871 -0.6864 -3.2697 7 35 4.2735 0.2347 -4.5135 8 6 2.8522 -2.0152 -3.4901 9 8 3.3041 -2.6561 -4.6003 10 6 2.9194 -4.0227 -4.7621 11 6 3.5098 -4.5628 -6.0392 12 8 4.1930 -3.8480 -6.7412 13 7 3.2792 -5.8406 -6.4006 14 6 3.8526 -6.3656 -7.6423 15 1 4.7539 -5.8352 -7.9496 16 6 4.0048 -7.8958 -7.6519 17 6 2.5783 -7.9554 -8.2229 18 1 1.8032 -7.9995 -7.4578 19 6 2.4008 -8.9981 -9.2965 20 6 3.1500 -8.9305 -10.4561 21 6 2.9901 -9.8891 -11.4392 22 6 2.0749 -10.9106 -11.2661 23 6 1.8979 -11.9536 -12.3393 24 9 0.9098 -11.5357 -13.2373 25 9 3.1057 -12.1287 -13.0233 26 9 1.5137 -13.1647 -11.7538 27 6 1.3219 -10.9752 -10.1086 28 6 1.4847 -10.0188 -9.1239 29 6 2.8234 -6.5371 -8.7719 30 6 2.0549 -2.6879 -2.5756 31 6 1.5968 -2.0343 -1.4481 32 1 -0.3934 0.4418 -0.7650 33 1 1.7923 -0.5138 0.8899 34 1 1.5616 2.4678 1.2086 35 1 3.5346 1.7703 -0.0322 36 1 2.9780 0.9996 -1.9724 37 1 3.2862 -4.6060 -3.9175 38 1 1.8324 -4.0914 -4.8065 39 1 2.7330 -6.4125 -5.8388 40 1 4.7672 -8.2544 -8.3434 41 1 4.0955 -8.3319 -6.6570 42 1 3.8629 -8.1307 -10.5928 43 1 3.5781 -9.8385 -12.3436 44 1 0.6066 -11.7731 -9.9736 45 1 0.8967 -10.0695 -8.2195 46 1 1.9609 -5.8769 -8.6807 47 1 3.2634 -6.5248 -9.7690 48 1 1.7933 -3.7219 -2.7447 49 1 0.9757 -2.5577 -0.7362 There are 77 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 77 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_9705038_6201210.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:35:50 Heat of formation + Delta-G solvation = -156.178470 kcal Electronic energy + Delta-G solvation = -38422.378468 eV Core-core repulsion = 32528.109328 eV Total energy + Delta-G solvation = -5894.269140 eV No. of doubly occupied orbitals = 77 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 486.049 amu Computer time = 1.19 seconds Orbital eigenvalues (eV) -51.22861 -48.75280 -48.70600 -41.82548 -41.39378 -40.44691 -39.34166 -38.66786 -37.19386 -34.82564 -33.48811 -32.79522 -32.13529 -32.05924 -30.48038 -29.55152 -27.75168 -26.69936 -26.36479 -25.08624 -24.16277 -23.87448 -22.60596 -22.33647 -21.83027 -20.25299 -19.58682 -19.52506 -19.51615 -19.39062 -18.57286 -18.06938 -17.59356 -17.43703 -16.93709 -16.67271 -16.46228 -16.33304 -16.00966 -15.89749 -15.66430 -15.62636 -15.54249 -15.50337 -15.26800 -15.16106 -14.94909 -14.86862 -14.78012 -14.68509 -14.48202 -14.36031 -14.28246 -14.07855 -14.03949 -13.88363 -13.44118 -13.39856 -13.22226 -12.79212 -12.41833 -12.36573 -12.23759 -12.18248 -11.90813 -11.85557 -11.84633 -11.77284 -11.24117 -11.19431 -11.00568 -10.45801 -10.16171 -10.04761 -9.98700 -9.92264 -9.30030 -5.02987 -0.12476 -0.02302 0.09329 0.28148 0.64814 1.29248 1.40211 1.45155 1.59565 1.62581 1.93450 2.41241 2.41833 2.49965 2.69494 2.97206 3.35757 3.44313 3.47960 3.50056 3.56925 3.64225 3.69354 3.80061 3.83611 3.85301 3.89195 3.95681 4.04558 4.09673 4.10280 4.21052 4.31745 4.35565 4.40042 4.47131 4.63018 4.64959 4.68704 4.78870 4.79903 4.84715 4.87542 5.01635 5.04313 5.04770 5.13789 5.19835 5.20807 5.31339 5.44287 5.48464 5.62592 5.78799 6.06788 6.46061 6.77962 7.15370 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.550 6.550 2 C -0.052 4.052 3 Si 0.743 3.257 4 C -0.151 4.151 5 C -0.056 4.056 6 C -0.140 4.140 7 Br -0.050 7.050 8 C 0.150 3.850 9 O -0.304 6.304 10 C 0.033 3.967 11 C 0.515 3.485 12 O -0.567 6.567 13 N -0.692 5.692 14 C 0.115 3.885 15 H 0.082 0.918 16 C -0.123 4.123 17 C -0.068 4.068 18 H 0.125 0.875 19 C -0.039 4.039 20 C -0.122 4.122 21 C -0.079 4.079 22 C -0.202 4.202 23 C 0.505 3.495 24 F -0.185 7.185 25 F -0.183 7.183 26 F -0.182 7.182 27 C -0.078 4.078 28 C -0.115 4.115 29 C -0.144 4.144 30 C -0.194 4.194 31 C -0.033 4.033 32 H 0.396 0.604 33 H 0.118 0.882 34 H -0.293 1.293 35 H -0.289 1.289 36 H 0.145 0.855 37 H 0.129 0.871 38 H 0.132 0.868 39 H 0.422 0.578 40 H 0.100 0.900 41 H 0.095 0.905 42 H 0.149 0.851 43 H 0.139 0.861 44 H 0.142 0.858 45 H 0.159 0.841 46 H 0.071 0.929 47 H 0.096 0.904 48 H 0.174 0.826 49 H 0.156 0.844 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.771 -3.178 4.918 7.553 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.358 6.358 2 C -0.164 4.164 3 Si 0.650 3.350 4 C -0.153 4.153 5 C -0.075 4.075 6 C -0.220 4.220 7 Br 0.035 6.965 8 C 0.102 3.898 9 O -0.217 6.217 10 C -0.045 4.045 11 C 0.301 3.699 12 O -0.444 6.444 13 N -0.346 5.346 14 C 0.010 3.990 15 H 0.100 0.900 16 C -0.160 4.160 17 C -0.086 4.086 18 H 0.143 0.857 19 C -0.039 4.039 20 C -0.140 4.140 21 C -0.097 4.097 22 C -0.204 4.204 23 C 0.451 3.549 24 F -0.166 7.166 25 F -0.164 7.164 26 F -0.163 7.163 27 C -0.096 4.096 28 C -0.133 4.133 29 C -0.183 4.183 30 C -0.213 4.213 31 C -0.052 4.052 32 H 0.246 0.754 33 H 0.136 0.864 34 H -0.220 1.220 35 H -0.216 1.216 36 H 0.162 0.838 37 H 0.147 0.853 38 H 0.149 0.851 39 H 0.260 0.740 40 H 0.118 0.882 41 H 0.113 0.887 42 H 0.167 0.833 43 H 0.157 0.843 44 H 0.160 0.840 45 H 0.177 0.823 46 H 0.090 0.910 47 H 0.114 0.886 48 H 0.191 0.809 49 H 0.173 0.827 Dipole moment (debyes) X Y Z Total from point charges -3.186 -1.993 4.711 6.026 hybrid contribution -0.157 -1.220 -0.011 1.230 sum -3.342 -3.213 4.700 6.602 Atomic orbital electron populations 1.86475 1.16742 1.81956 1.50628 1.24809 0.85439 1.09191 0.96937 0.93988 0.78416 0.77098 0.85457 1.20295 1.01270 0.96043 0.97681 1.20917 0.95610 0.99745 0.91257 1.21140 1.07585 0.94100 0.99225 1.96777 1.66556 1.75266 1.57896 1.18795 0.93520 0.90620 0.86863 1.86244 1.70301 1.25746 1.39391 1.22845 1.03034 0.81405 0.97180 1.20487 0.80208 0.82411 0.86802 1.90795 1.39750 1.58686 1.55197 1.45316 1.53530 1.11252 1.24506 1.21836 0.96999 0.95576 0.84602 0.90014 1.23366 0.96301 0.92998 1.03381 1.21781 0.98996 0.91724 0.96082 0.85702 1.20155 0.93816 0.95106 0.94782 1.21244 1.00606 0.99022 0.93082 1.21114 0.95688 0.92615 1.00289 1.20024 1.05170 0.98728 0.96433 1.18549 0.73524 0.81162 0.81622 1.93217 1.62993 1.90052 1.70373 1.93182 1.45789 1.95787 1.81686 1.93182 1.91233 1.47962 1.83937 1.21177 0.97312 0.99345 0.91774 1.21360 0.98698 0.93526 0.99728 1.23621 0.99684 0.95948 0.99030 1.21612 1.01620 1.02608 0.95431 1.21207 0.95156 0.92926 0.95881 0.75391 0.86439 1.22038 1.21617 0.83756 0.85306 0.85082 0.73951 0.88177 0.88665 0.83340 0.84341 0.83974 0.82305 0.91006 0.88600 0.80851 0.82654 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 2.02 12.77 -148.98 -1.90 0.12 16 2 C -0.05 0.19 2.82 71.24 0.20 0.39 16 3 Si 0.74 -1.67 29.78 68.60 2.04 0.37 16 4 C -0.15 0.45 5.39 -19.85 -0.11 0.34 16 5 C -0.06 0.00 8.40 22.27 0.19 0.19 16 6 C -0.14 -0.49 6.24 22.40 0.14 -0.35 16 7 Br -0.05 -0.36 33.16 -20.37 -0.68 -1.04 16 8 C 0.15 0.11 6.68 22.52 0.15 0.26 16 9 O -0.30 -0.88 9.00 -73.59 -0.66 -1.54 16 10 C 0.03 -0.23 5.22 71.24 0.37 0.14 16 11 C 0.51 -0.47 7.91 87.66 0.69 0.22 16 12 O -0.57 -6.53 16.12 16.02 0.26 -6.27 16 13 N -0.69 5.90 5.26 -440.05 -2.32 3.58 16 14 C 0.12 -0.72 4.30 45.51 0.20 -0.53 16 15 H 0.08 -0.02 7.50 -2.39 -0.02 -0.04 16 16 C -0.12 1.29 7.29 31.12 0.23 1.52 16 17 C -0.07 0.73 3.87 -10.92 -0.04 0.69 16 18 H 0.13 -1.85 8.09 -2.39 -0.02 -1.87 16 19 C -0.04 0.26 5.29 -19.87 -0.11 0.15 16 20 C -0.12 0.58 8.63 22.27 0.19 0.77 16 21 C -0.08 0.11 9.40 22.27 0.21 0.32 16 22 C -0.20 -0.12 5.45 -19.86 -0.11 -0.23 16 23 C 0.51 1.85 3.36 71.23 0.24 2.09 16 24 F -0.18 -1.07 17.30 44.97 0.78 -0.29 16 25 F -0.18 -0.92 16.46 44.97 0.74 -0.18 16 26 F -0.18 -0.82 16.46 44.97 0.74 -0.08 16 27 C -0.08 0.19 9.40 22.27 0.21 0.40 16 28 C -0.12 0.73 9.71 22.27 0.22 0.95 16 29 C -0.14 1.04 7.27 31.21 0.23 1.27 16 30 C -0.19 1.15 9.04 22.36 0.20 1.36 16 31 C -0.03 0.18 9.60 22.26 0.21 0.39 16 32 H 0.40 -4.36 8.70 -74.05 -0.64 -5.00 16 33 H 0.12 -0.42 7.96 -2.39 -0.02 -0.44 16 34 H -0.29 -1.42 7.11 99.48 0.71 -0.71 16 35 H -0.29 -1.02 7.11 99.48 0.71 -0.31 16 36 H 0.15 -0.27 4.87 -2.91 -0.01 -0.28 16 37 H 0.13 -1.75 7.66 -2.39 -0.02 -1.77 16 38 H 0.13 -1.83 7.66 -2.39 -0.02 -1.85 16 39 H 0.42 -6.97 8.70 -92.71 -0.81 -7.78 16 40 H 0.10 -0.97 7.73 -2.39 -0.02 -0.99 16 41 H 0.09 -1.23 8.14 -2.39 -0.02 -1.25 16 42 H 0.15 -1.17 6.65 -2.91 -0.02 -1.19 16 43 H 0.14 -0.38 7.60 -2.91 -0.02 -0.40 16 44 H 0.14 -0.63 7.60 -2.91 -0.02 -0.65 16 45 H 0.16 -1.86 8.05 -2.91 -0.02 -1.89 16 46 H 0.07 -0.39 8.14 -2.39 -0.02 -0.41 16 47 H 0.10 -0.64 6.31 -2.39 -0.02 -0.66 16 48 H 0.17 -2.37 6.30 -2.91 -0.02 -2.39 16 49 H 0.16 -1.37 8.06 -2.91 -0.02 -1.39 16 Total: 0.00 -28.42 441.56 2.17 -26.25 By element: Atomic # 1 Polarization: -30.92 SS G_CDS: -0.35 Total: -31.27 kcal Atomic # 6 Polarization: 6.84 SS G_CDS: 3.51 Total: 10.35 kcal Atomic # 7 Polarization: 5.90 SS G_CDS: -2.32 Total: 3.58 kcal Atomic # 8 Polarization: -5.39 SS G_CDS: -2.31 Total: -7.69 kcal Atomic # 9 Polarization: -2.81 SS G_CDS: 2.26 Total: -0.55 kcal Atomic # 14 Polarization: -1.67 SS G_CDS: 2.04 Total: 0.37 kcal Atomic # 35 Polarization: -0.36 SS G_CDS: -0.68 Total: -1.04 kcal Total: -28.42 2.17 -26.25 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9705038_6201210.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -129.928 kcal (2) G-P(sol) polarization free energy of solvation -28.421 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -158.349 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 2.170 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -26.251 kcal (6) G-S(sol) free energy of system = (1) + (5) -156.178 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.19 seconds