Wall clock time and date at job start Tue Mar 9 2021 13:36:13 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50706 * 1 3 3 C 1.33810 * 122.44553 * 2 1 4 4 C 1.50699 * 124.52689 * 359.97438 * 3 2 1 5 5 O 1.42901 * 109.47156 * 30.00304 * 4 3 2 6 6 Si 1.86307 * 109.47069 * 149.99999 * 4 3 2 7 7 S 1.70624 * 110.95337 * 179.74330 * 3 2 1 8 8 C 1.75834 * 91.55935 * 0.30674 * 7 3 2 9 9 C 1.46586 * 125.45585 * 179.97438 * 8 7 3 10 10 O 1.21698 * 119.99675 * 179.69169 * 9 8 7 11 11 N 1.34773 * 119.99926 * 359.69751 * 9 8 7 12 12 C 1.46506 * 119.99969 * 180.02562 * 11 9 8 13 13 H 1.08997 * 112.84605 * 25.05396 * 12 11 9 14 14 C 1.53782 * 113.61445 * 156.25077 * 12 11 9 15 15 C 1.53784 * 87.07767 * 89.11728 * 14 12 11 16 16 H 1.09008 * 113.61143 * 270.79363 * 15 14 12 17 17 C 1.50697 * 113.61443 * 139.98357 * 15 14 12 18 18 C 1.38239 * 119.99885 * 299.72553 * 17 15 14 19 19 C 1.38237 * 120.00059 * 179.79037 * 18 17 15 20 20 C 1.38228 * 119.99701 * 0.43584 * 19 18 17 21 21 C 1.50706 * 119.99840 * 179.83689 * 20 19 18 22 22 F 1.39898 * 109.46910 * 269.97934 * 21 20 19 23 23 F 1.39904 * 109.47017 * 29.97945 * 21 20 19 24 24 F 1.39902 * 109.47450 * 149.97587 * 21 20 19 25 25 C 1.38237 * 120.00580 * 359.81251 * 20 19 18 26 26 C 1.38230 * 120.00353 * 119.99099 * 17 15 14 27 27 C 1.53785 * 113.61303 * 253.85863 * 12 11 9 28 28 C 1.36649 * 109.08486 * 359.69979 * 8 7 3 29 29 H 1.09000 * 109.46826 * 269.99747 * 1 2 3 30 30 H 1.09001 * 109.47321 * 29.99474 * 1 2 3 31 31 H 1.09000 * 109.47474 * 150.00270 * 1 2 3 32 32 H 1.08995 * 109.47704 * 270.00012 * 4 3 2 33 33 H 0.96692 * 114.00526 * 179.97438 * 5 4 3 34 34 H 1.48497 * 110.00014 * 300.00144 * 6 4 3 35 35 H 1.48499 * 109.99871 * 61.32223 * 6 4 3 36 36 H 0.97005 * 120.00161 * 359.71966 * 11 9 8 37 37 H 1.09004 * 113.61155 * 203.66071 * 14 12 11 38 38 H 1.08996 * 113.61093 * 334.56523 * 14 12 11 39 39 H 1.08001 * 119.99989 * 359.97438 * 18 17 15 40 40 H 1.07998 * 119.99689 * 180.26893 * 19 18 17 41 41 H 1.08001 * 120.00398 * 179.97438 * 25 20 19 42 42 H 1.08002 * 120.00219 * 359.97438 * 26 17 15 43 43 H 1.09003 * 113.61400 * 25.43327 * 27 12 11 44 44 H 1.08998 * 113.61245 * 156.33176 * 27 12 11 45 45 H 1.08001 * 123.35311 * 180.21118 * 28 8 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5071 0.0000 0.0000 3 6 2.2249 1.1292 0.0000 4 6 1.6354 2.5161 -0.0006 5 8 0.3751 2.4983 0.6727 6 14 2.7922 3.6829 0.8779 7 16 3.8970 0.7893 0.0071 8 6 3.5937 -0.9427 0.0007 9 6 4.6232 -1.9862 0.0022 10 8 4.3002 -3.1595 0.0031 11 7 5.9273 -1.6462 0.0028 12 6 6.9562 -2.6891 0.0037 13 1 6.6059 -3.6296 -0.4215 14 6 8.3073 -2.2221 -0.5632 15 6 8.6689 -1.7895 0.8676 16 1 8.3729 -0.7670 1.1025 17 6 10.0972 -2.0867 1.2453 18 6 10.5577 -3.3901 1.2359 19 6 11.8691 -3.6622 1.5782 20 6 12.7173 -2.6320 1.9386 21 6 14.1460 -2.9291 2.3153 22 9 14.2261 -3.1633 3.6922 23 9 14.5847 -4.0630 1.6230 24 9 14.9535 -1.8369 1.9802 25 6 12.2555 -1.3292 1.9529 26 6 10.9453 -1.0566 1.6065 27 6 7.6670 -2.8520 1.3577 28 6 2.2446 -1.1601 0.0004 29 1 -0.3633 0.0000 1.0277 30 1 -0.3634 0.8900 -0.5137 31 1 -0.3634 -0.8900 -0.5138 32 1 1.4937 2.8503 -1.0283 33 1 -0.0627 3.3596 0.7109 34 1 2.9937 3.2383 2.2803 35 1 4.0961 3.7348 0.1691 36 1 6.1847 -0.7109 -0.0019 37 1 8.9260 -3.0352 -0.9430 38 1 8.2232 -1.3905 -1.2627 39 1 9.8938 -4.1954 0.9583 40 1 12.2300 -4.6800 1.5667 41 1 12.9181 -0.5243 2.2349 42 1 10.5844 -0.0387 1.6176 43 1 7.0663 -2.5286 2.2079 44 1 8.1108 -3.8370 1.5021 45 1 1.8019 -2.1452 0.0001 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_9705038_6739946.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:36:13 Heat of formation + Delta-G solvation = -131.118793 kcal Electronic energy + Delta-G solvation = -33252.068419 eV Core-core repulsion = 28106.538390 eV Total energy + Delta-G solvation = -5145.530030 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 398.095 amu Computer time = 0.79 seconds Orbital eigenvalues (eV) -51.09368 -48.61360 -48.55455 -41.81095 -40.66976 -39.84844 -38.91948 -37.45911 -34.86214 -32.98224 -32.28822 -32.03772 -30.25129 -28.13668 -26.95759 -26.62527 -25.11116 -24.41398 -24.01612 -22.53453 -21.98330 -20.50889 -20.01002 -19.57652 -19.41393 -19.29912 -19.25949 -18.49264 -17.56446 -17.36789 -16.75891 -16.58193 -16.33580 -16.08027 -15.94215 -15.87685 -15.43767 -15.35380 -15.08950 -15.01562 -14.88936 -14.82312 -14.71325 -14.67460 -14.56968 -14.48939 -14.44787 -14.37156 -14.19916 -13.69753 -13.42505 -13.22153 -13.09562 -12.92055 -12.82079 -12.57925 -12.55793 -12.24100 -12.11746 -11.99596 -11.97854 -11.45454 -11.16431 -10.75513 -10.29312 -10.19548 -10.06913 -9.73509 -9.45460 -5.34377 -0.68299 -0.23933 0.13005 0.22319 0.60564 0.97676 1.30846 1.41808 1.68821 1.77226 1.87553 2.10340 2.28461 2.73772 3.03428 3.12084 3.19721 3.40868 3.43532 3.47825 3.56881 3.61257 3.68214 3.72113 3.74808 3.94695 4.07584 4.12645 4.20762 4.23938 4.35190 4.42211 4.49202 4.54072 4.55681 4.62637 4.65718 4.78310 4.81748 4.82875 4.89981 4.91272 5.01888 5.04437 5.05619 5.29618 5.37269 5.42086 5.46740 5.60870 6.25008 6.40443 7.01405 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.086 4.086 2 C -0.084 4.084 3 C -0.195 4.195 4 C -0.033 4.033 5 O -0.536 6.536 6 Si 0.670 3.330 7 S 0.180 5.820 8 C -0.263 4.263 9 C 0.597 3.403 10 O -0.520 6.520 11 N -0.712 5.712 12 C 0.121 3.879 13 H 0.111 0.889 14 C -0.134 4.134 15 C -0.081 4.081 16 H 0.101 0.899 17 C -0.038 4.038 18 C -0.118 4.118 19 C -0.066 4.066 20 C -0.187 4.187 21 C 0.508 3.492 22 F -0.176 7.176 23 F -0.177 7.177 24 F -0.177 7.177 25 C -0.067 4.067 26 C -0.117 4.117 27 C -0.143 4.143 28 C -0.043 4.043 29 H 0.074 0.926 30 H 0.081 0.919 31 H 0.060 0.940 32 H 0.085 0.915 33 H 0.384 0.616 34 H -0.241 1.241 35 H -0.239 1.239 36 H 0.398 0.602 37 H 0.103 0.897 38 H 0.080 0.920 39 H 0.137 0.863 40 H 0.137 0.863 41 H 0.137 0.863 42 H 0.134 0.866 43 H 0.078 0.922 44 H 0.100 0.900 45 H 0.158 0.842 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.319 6.924 -1.911 7.912 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.144 4.144 2 C -0.097 4.097 3 C -0.314 4.314 4 C -0.146 4.146 5 O -0.343 6.343 6 Si 0.569 3.431 7 S 0.447 5.553 8 C -0.383 4.383 9 C 0.384 3.616 10 O -0.397 6.397 11 N -0.363 5.363 12 C 0.016 3.984 13 H 0.129 0.871 14 C -0.172 4.172 15 C -0.099 4.099 16 H 0.120 0.880 17 C -0.038 4.038 18 C -0.136 4.136 19 C -0.084 4.084 20 C -0.188 4.188 21 C 0.454 3.546 22 F -0.157 7.157 23 F -0.158 7.158 24 F -0.158 7.158 25 C -0.085 4.085 26 C -0.135 4.135 27 C -0.182 4.182 28 C -0.076 4.076 29 H 0.093 0.907 30 H 0.099 0.901 31 H 0.079 0.921 32 H 0.103 0.897 33 H 0.233 0.767 34 H -0.164 1.164 35 H -0.163 1.163 36 H 0.233 0.767 37 H 0.121 0.879 38 H 0.099 0.901 39 H 0.154 0.846 40 H 0.155 0.845 41 H 0.154 0.846 42 H 0.152 0.848 43 H 0.097 0.903 44 H 0.118 0.882 45 H 0.176 0.824 Dipole moment (debyes) X Y Z Total from point charges -1.249 6.414 -1.401 6.683 hybrid contribution -0.876 -0.761 -0.144 1.169 sum -2.125 5.654 -1.545 6.234 Atomic orbital electron populations 1.20532 0.88216 1.02680 1.03008 1.18748 0.98800 0.90232 1.01882 1.23226 0.97875 0.98855 1.11415 1.23974 0.92971 0.96198 1.01419 1.86571 1.32488 1.36302 1.78950 0.94983 0.79626 0.87211 0.81316 1.82945 1.03219 0.99211 1.69911 1.24563 0.98025 0.96563 1.19129 1.16893 0.81448 0.87398 0.75868 1.90863 1.81474 1.18070 1.49333 1.45529 1.05078 1.09706 1.75965 1.21878 0.86946 0.92410 0.97207 0.87148 1.23435 0.95534 1.02554 0.95671 1.21771 0.90677 1.00409 0.97075 0.88047 1.19938 0.95179 0.93265 0.95417 1.21033 0.95145 0.96704 1.00730 1.20969 0.93266 0.98815 0.95340 1.19998 0.92519 0.96526 1.09806 1.18318 0.87220 0.74256 0.74847 1.93241 1.96860 1.94360 1.31286 1.93203 1.91073 1.52201 1.79322 1.93201 1.75892 1.54532 1.92201 1.20976 0.96353 0.94993 0.96141 1.21069 0.92835 0.99623 0.99976 1.23638 0.96924 0.99623 0.98015 1.20780 0.90863 1.00240 0.95709 0.90735 0.90051 0.92099 0.89718 0.76733 1.16443 1.16284 0.76716 0.87859 0.90138 0.84555 0.84495 0.84557 0.84800 0.90338 0.88210 0.82421 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.09 -0.04 8.70 36.01 0.31 0.27 16 2 C -0.08 -0.15 5.75 -106.45 -0.61 -0.77 16 3 C -0.20 -0.21 5.57 -35.86 -0.20 -0.41 16 4 C -0.03 0.05 2.75 36.01 0.10 0.15 16 5 O -0.54 1.09 9.81 -35.23 -0.35 0.74 16 6 Si 0.67 -1.62 31.30 -169.99 -5.32 -6.94 16 7 S 0.18 0.09 19.79 -107.50 -2.13 -2.04 16 8 C -0.26 -0.60 6.45 -36.79 -0.24 -0.84 16 9 C 0.60 1.81 7.78 -12.90 -0.10 1.70 16 10 O -0.52 -3.33 16.46 5.19 0.09 -3.25 16 11 N -0.71 0.07 5.26 -54.35 -0.29 -0.22 16 12 C 0.12 -0.12 4.30 -67.11 -0.29 -0.41 16 13 H 0.11 0.04 7.49 -51.93 -0.39 -0.35 16 14 C -0.13 0.38 7.29 -25.92 -0.19 0.19 16 15 C -0.08 0.22 3.87 -90.82 -0.35 -0.14 16 16 H 0.10 -0.35 8.09 -51.92 -0.42 -0.77 16 17 C -0.04 0.06 5.29 -104.63 -0.55 -0.50 16 18 C -0.12 0.16 8.63 -39.58 -0.34 -0.18 16 19 C -0.07 0.02 9.40 -39.59 -0.37 -0.35 16 20 C -0.19 -0.13 5.45 -104.62 -0.57 -0.70 16 21 C 0.51 0.92 3.36 36.01 0.12 1.04 16 22 F -0.18 -0.49 17.30 2.25 0.04 -0.45 16 23 F -0.18 -0.41 16.46 2.25 0.04 -0.37 16 24 F -0.18 -0.41 16.46 2.25 0.04 -0.37 16 25 C -0.07 0.02 9.40 -39.58 -0.37 -0.35 16 26 C -0.12 0.15 9.71 -39.58 -0.38 -0.23 16 27 C -0.14 0.25 7.27 -25.78 -0.19 0.06 16 28 C -0.04 -0.10 9.80 -40.44 -0.40 -0.50 16 29 H 0.07 0.06 8.14 -51.93 -0.42 -0.37 16 30 H 0.08 0.00 6.41 -51.93 -0.33 -0.33 16 31 H 0.06 -0.02 8.13 -51.93 -0.42 -0.44 16 32 H 0.09 -0.28 7.96 -51.93 -0.41 -0.69 16 33 H 0.38 -2.64 8.74 45.56 0.40 -2.24 16 34 H -0.24 -0.29 7.11 56.52 0.40 0.11 16 35 H -0.24 0.19 7.11 56.52 0.40 0.59 16 36 H 0.40 -0.81 7.82 -40.82 -0.32 -1.13 16 37 H 0.10 -0.34 7.73 -51.93 -0.40 -0.74 16 38 H 0.08 -0.26 8.14 -51.93 -0.42 -0.68 16 39 H 0.14 -0.42 6.64 -52.49 -0.35 -0.77 16 40 H 0.14 -0.19 7.60 -52.49 -0.40 -0.59 16 41 H 0.14 -0.19 7.61 -52.49 -0.40 -0.59 16 42 H 0.13 -0.43 8.05 -52.49 -0.42 -0.85 16 43 H 0.08 -0.05 8.14 -51.93 -0.42 -0.47 16 44 H 0.10 -0.24 6.30 -51.93 -0.33 -0.57 16 45 H 0.16 0.32 8.06 -52.49 -0.42 -0.10 16 LS Contribution 398.90 15.07 6.01 6.01 Total: 0.00 -8.24 398.90 -11.58 -19.82 By element: Atomic # 1 Polarization: -5.89 SS G_CDS: -5.09 Total: -10.97 kcal Atomic # 6 Polarization: 2.66 SS G_CDS: -4.62 Total: -1.96 kcal Atomic # 7 Polarization: 0.07 SS G_CDS: -0.29 Total: -0.22 kcal Atomic # 8 Polarization: -2.25 SS G_CDS: -0.26 Total: -2.51 kcal Atomic # 9 Polarization: -1.31 SS G_CDS: 0.11 Total: -1.20 kcal Atomic # 14 Polarization: -1.62 SS G_CDS: -5.32 Total: -6.94 kcal Atomic # 16 Polarization: 0.09 SS G_CDS: -2.13 Total: -2.04 kcal Total LS contribution 6.01 Total: 6.01 kcal Total: -8.24 -11.58 -19.82 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9705038_6739946.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -111.300 kcal (2) G-P(sol) polarization free energy of solvation -8.241 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -119.541 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.578 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.819 kcal (6) G-S(sol) free energy of system = (1) + (5) -131.119 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.79 seconds