Wall clock time and date at job start Tue Mar 9 2021 13:36:57 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46501 * 1 3 3 C 1.35528 * 125.68205 * 2 1 4 4 C 1.35452 * 108.87191 * 180.26626 * 3 2 1 5 5 C 1.50704 * 126.06935 * 179.74409 * 4 3 2 6 6 O 1.42900 * 109.47323 * 245.02719 * 5 4 3 7 7 Si 1.86304 * 109.46923 * 5.02510 * 5 4 3 8 8 C 1.39832 * 107.86729 * 359.76504 * 4 3 2 9 9 C 1.37652 * 125.67181 * 179.86452 * 2 1 3 10 10 C 1.46673 * 126.23596 * 0.02562 * 9 2 1 11 11 O 1.21686 * 120.00204 * 3.98584 * 10 9 2 12 12 N 1.34777 * 119.99926 * 183.98236 * 10 9 2 13 13 C 1.46500 * 119.99994 * 174.28741 * 12 10 9 14 14 H 1.08997 * 112.85159 * 23.80291 * 13 12 10 15 15 C 1.53780 * 113.61528 * 155.00286 * 13 12 10 16 16 C 1.53782 * 87.08270 * 89.20107 * 15 13 12 17 17 H 1.09000 * 113.61361 * 270.79881 * 16 15 13 18 18 C 1.50698 * 113.61491 * 139.98094 * 16 15 13 19 19 C 1.38438 * 120.01202 * 119.99852 * 18 16 15 20 20 F 1.35096 * 120.02733 * 359.95790 * 19 18 16 21 21 C 1.38488 * 119.94937 * 179.97438 * 19 18 16 22 22 C 1.38179 * 119.97106 * 359.97438 * 21 19 18 23 23 C 1.38261 * 120.02839 * 0.02562 * 22 21 19 24 24 C 1.38222 * 120.01514 * 299.97270 * 18 16 15 25 25 C 1.53778 * 87.08179 * 25.43271 * 16 15 13 26 26 H 1.08999 * 109.47034 * 264.44007 * 1 2 3 27 27 H 1.09000 * 109.46743 * 24.43045 * 1 2 3 28 28 H 1.08989 * 109.47426 * 144.43549 * 1 2 3 29 29 H 1.08000 * 125.56788 * 359.97438 * 3 2 1 30 30 H 1.08998 * 109.46838 * 125.01989 * 5 4 3 31 31 H 0.96692 * 113.99778 * 180.02562 * 6 5 4 32 32 H 1.48499 * 109.99678 * 299.99990 * 7 5 4 33 33 H 1.48494 * 110.00207 * 61.31656 * 7 5 4 34 34 H 1.08001 * 126.46169 * 179.97438 * 8 4 3 35 35 H 0.97004 * 120.00426 * 354.29336 * 12 10 9 36 36 H 1.08990 * 113.61481 * 334.64927 * 15 13 12 37 37 H 1.09004 * 113.61213 * 203.74649 * 15 13 12 38 38 H 1.07999 * 120.01325 * 179.97438 * 21 19 18 39 39 H 1.08001 * 119.98143 * 180.02562 * 22 21 19 40 40 H 1.07999 * 119.97664 * 179.72033 * 23 22 21 41 41 H 1.07999 * 119.98308 * 0.04758 * 24 18 16 42 42 H 1.09002 * 113.61491 * 89.11684 * 25 16 15 43 43 H 1.08997 * 113.61679 * 220.01982 * 25 16 15 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.2555 1.1008 0.0000 4 6 3.5522 0.7091 -0.0060 5 6 4.7538 1.6186 -0.0135 6 8 5.4707 1.4507 -1.2382 7 14 4.1937 3.3888 0.1405 8 6 3.5780 -0.6890 -0.0044 9 6 2.2677 -1.1182 0.0026 10 6 1.8122 -2.5125 0.0054 11 8 0.6240 -2.7645 -0.0677 12 7 2.7098 -3.5144 0.0889 13 6 2.2511 -4.8998 0.2179 14 1 1.2426 -5.0494 -0.1676 15 6 3.2664 -5.9350 -0.2944 16 6 3.8555 -5.9439 1.1260 17 1 4.6370 -5.1997 1.2793 18 6 4.2519 -7.3161 1.6066 19 6 5.5666 -7.5750 1.9545 20 9 6.4951 -6.5980 1.8627 21 6 5.9293 -8.8363 2.3965 22 6 4.9787 -9.8348 2.4901 23 6 3.6660 -9.5751 2.1424 24 6 3.3029 -8.3167 1.7006 25 6 2.4697 -5.4952 1.6189 26 1 -0.3633 -0.0996 1.0228 27 1 -0.3633 0.9357 -0.4250 28 1 -0.3634 -0.8359 -0.5976 29 1 1.9084 2.1235 -0.0004 30 1 5.4036 1.3689 0.8252 31 1 6.2586 2.0063 -1.3120 32 1 3.3068 3.7416 -0.9972 33 1 3.4743 3.5841 1.4247 34 1 4.4583 -1.3146 -0.0084 35 1 3.6594 -3.3183 0.0637 36 1 3.9488 -5.5416 -1.0477 37 1 2.8141 -6.8831 -0.5855 38 1 6.9547 -9.0395 2.6678 39 1 5.2613 -10.8184 2.8352 40 1 2.9246 -10.3573 2.2116 41 1 2.2772 -8.1150 1.4289 42 1 1.7996 -6.3230 1.8509 43 1 2.5089 -4.7466 2.4101 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_9705094_10803934.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:36:57 Heat of formation + Delta-G solvation = -3.325510 kcal Electronic energy + Delta-G solvation = -27498.445188 eV Core-core repulsion = 23426.550245 eV Total energy + Delta-G solvation = -4071.894944 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 331.137 amu Computer time = 0.56 seconds Orbital eigenvalues (eV) -49.82267 -42.57216 -41.38986 -39.93564 -38.66760 -37.61498 -34.91368 -33.84909 -32.08688 -31.48996 -30.67703 -28.41396 -26.83972 -26.48743 -25.62288 -24.26834 -23.53730 -22.62610 -21.19209 -20.60914 -20.03500 -18.86757 -18.53648 -18.26302 -17.51057 -17.28629 -16.88438 -16.78956 -16.64909 -16.53640 -15.68808 -15.60985 -15.32883 -15.24594 -15.07651 -14.96839 -14.71918 -14.29795 -14.11979 -14.08418 -13.92767 -13.64876 -13.58795 -13.29864 -13.18289 -13.08670 -13.05042 -12.45524 -12.40316 -11.97661 -11.90624 -11.82600 -11.31843 -11.03006 -10.23447 -10.15467 -9.93007 -9.68372 -9.60037 -9.26784 -4.99137 0.14336 0.19573 0.42352 1.32779 1.46202 1.53133 1.69991 2.00620 2.25544 2.34587 2.54642 3.23607 3.35367 3.52966 3.53434 3.58310 3.69948 3.76422 3.81786 3.85030 3.89398 3.97994 4.07415 4.09367 4.25156 4.25718 4.31418 4.35356 4.55549 4.58840 4.60615 4.61773 4.75195 4.76678 4.80594 4.86581 4.91524 5.02380 5.04452 5.16670 5.18547 5.33371 5.41040 5.50986 5.65554 5.88634 5.89003 6.08042 6.43348 6.73955 7.15131 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.065 3.935 2 N -0.403 5.403 3 C 0.021 3.979 4 C -0.162 4.162 5 C -0.034 4.034 6 O -0.547 6.547 7 Si 0.682 3.318 8 C -0.108 4.108 9 C -0.054 4.054 10 C 0.597 3.403 11 O -0.545 6.545 12 N -0.702 5.702 13 C 0.123 3.877 14 H 0.109 0.891 15 C -0.134 4.134 16 C -0.076 4.076 17 H 0.102 0.898 18 C -0.105 4.105 19 C 0.100 3.900 20 F -0.138 7.138 21 C -0.152 4.152 22 C -0.094 4.094 23 C -0.127 4.127 24 C -0.090 4.090 25 C -0.142 4.142 26 H 0.080 0.920 27 H 0.085 0.915 28 H 0.104 0.896 29 H 0.165 0.835 30 H 0.071 0.929 31 H 0.379 0.621 32 H -0.254 1.254 33 H -0.257 1.257 34 H 0.148 0.852 35 H 0.405 0.595 36 H 0.080 0.920 37 H 0.101 0.899 38 H 0.135 0.865 39 H 0.133 0.867 40 H 0.130 0.870 41 H 0.133 0.867 42 H 0.098 0.902 43 H 0.076 0.924 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.294 0.241 1.231 2.614 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.075 4.075 2 N -0.075 5.075 3 C -0.115 4.115 4 C -0.168 4.168 5 C -0.145 4.145 6 O -0.353 6.353 7 Si 0.584 3.416 8 C -0.134 4.134 9 C -0.167 4.167 10 C 0.385 3.615 11 O -0.423 6.423 12 N -0.353 5.353 13 C 0.017 3.983 14 H 0.127 0.873 15 C -0.172 4.172 16 C -0.094 4.094 17 H 0.120 0.880 18 C -0.106 4.106 19 C 0.081 3.919 20 F -0.117 7.117 21 C -0.171 4.171 22 C -0.112 4.112 23 C -0.145 4.145 24 C -0.108 4.108 25 C -0.181 4.181 26 H 0.098 0.902 27 H 0.104 0.896 28 H 0.123 0.877 29 H 0.182 0.818 30 H 0.088 0.912 31 H 0.226 0.774 32 H -0.178 1.178 33 H -0.182 1.182 34 H 0.165 0.835 35 H 0.240 0.760 36 H 0.098 0.902 37 H 0.119 0.881 38 H 0.153 0.847 39 H 0.151 0.849 40 H 0.148 0.852 41 H 0.151 0.849 42 H 0.116 0.884 43 H 0.095 0.905 Dipole moment (debyes) X Y Z Total from point charges -0.129 0.183 1.159 1.180 hybrid contribution 0.642 -0.240 0.180 0.708 sum 0.513 -0.057 1.338 1.434 Atomic orbital electron populations 1.22338 0.75396 1.05211 1.04580 1.43760 1.07050 1.04577 1.52124 1.21687 0.90303 0.91415 1.08111 1.18696 0.92102 0.93915 1.12119 1.23939 0.93631 1.07697 0.89266 1.86510 1.43369 1.68267 1.37178 0.95277 0.87130 0.79012 0.80210 1.21185 0.94363 0.94385 1.03510 1.19988 0.90224 0.87541 1.18921 1.16889 0.85540 0.83378 0.75651 1.90800 1.16177 1.84776 1.50569 1.45272 1.09795 1.05430 1.74797 1.21838 0.99778 0.79893 0.96753 0.87257 1.23434 0.98059 0.99656 0.96035 1.21553 0.97849 0.93421 0.96607 0.87984 1.19737 0.91912 0.96807 1.02095 1.17596 0.86131 0.86058 1.02117 1.91492 1.64799 1.61401 1.93961 1.21211 1.01381 0.91970 1.02514 1.21072 0.92750 0.99043 0.98380 1.21250 0.96574 0.97084 0.99577 1.20936 0.99279 0.92194 0.98406 1.23586 0.95807 1.01175 0.97513 0.90182 0.89612 0.87723 0.81802 0.91150 0.77360 1.17816 1.18162 0.83479 0.75956 0.90175 0.88074 0.84665 0.84929 0.85166 0.84884 0.88390 0.90497 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.07 0.06 10.47 59.85 0.63 0.69 16 2 N -0.40 -1.25 3.16 -120.24 -0.38 -1.63 16 3 C 0.02 0.06 9.92 -16.91 -0.17 -0.11 16 4 C -0.16 -0.45 5.46 -105.02 -0.57 -1.02 16 5 C -0.03 -0.01 3.01 36.01 0.11 0.10 16 6 O -0.55 -0.32 12.86 -35.23 -0.45 -0.78 16 7 Si 0.68 -0.73 30.60 -169.99 -5.20 -5.93 16 8 C -0.11 -0.27 10.29 -39.12 -0.40 -0.67 16 9 C -0.05 -0.18 6.89 -81.98 -0.56 -0.75 16 10 C 0.60 2.07 7.77 -12.86 -0.10 1.97 16 11 O -0.54 -3.28 14.36 5.20 0.07 -3.21 16 12 N -0.70 -0.41 5.25 -54.32 -0.29 -0.70 16 13 C 0.12 -0.02 4.36 -67.12 -0.29 -0.31 16 14 H 0.11 0.12 7.41 -51.93 -0.38 -0.27 16 15 C -0.13 0.18 7.29 -25.92 -0.19 -0.01 16 16 C -0.08 0.05 3.78 -90.96 -0.34 -0.30 16 17 H 0.10 -0.03 7.45 -51.93 -0.39 -0.42 16 18 C -0.10 -0.04 5.29 -104.56 -0.55 -0.60 16 19 C 0.10 0.16 7.25 -39.42 -0.29 -0.12 16 20 F -0.14 -0.38 16.36 2.25 0.04 -0.34 16 21 C -0.15 -0.08 10.03 -39.51 -0.40 -0.48 16 22 C -0.09 0.06 10.04 -39.59 -0.40 -0.34 16 23 C -0.13 0.12 10.04 -39.58 -0.40 -0.28 16 24 C -0.09 0.06 8.61 -39.59 -0.34 -0.28 16 25 C -0.14 0.10 7.26 -25.92 -0.19 -0.09 16 26 H 0.08 0.02 8.14 -51.93 -0.42 -0.40 16 27 H 0.09 -0.11 8.12 -51.93 -0.42 -0.54 16 28 H 0.10 0.22 6.57 -51.94 -0.34 -0.12 16 29 H 0.16 0.17 6.21 -52.49 -0.33 -0.15 16 30 H 0.07 -0.09 7.96 -51.93 -0.41 -0.50 16 31 H 0.38 -1.71 8.74 45.56 0.40 -1.31 16 32 H -0.25 -0.51 7.11 56.52 0.40 -0.10 16 33 H -0.26 -0.35 7.11 56.52 0.40 0.05 16 34 H 0.15 0.04 7.45 -52.49 -0.39 -0.35 16 35 H 0.40 -0.51 7.60 -40.82 -0.31 -0.82 16 36 H 0.08 -0.11 8.14 -51.93 -0.42 -0.54 16 37 H 0.10 -0.20 7.72 -51.93 -0.40 -0.61 16 38 H 0.14 -0.11 8.06 -52.49 -0.42 -0.53 16 39 H 0.13 -0.34 8.06 -52.49 -0.42 -0.77 16 40 H 0.13 -0.36 8.06 -52.49 -0.42 -0.79 16 41 H 0.13 -0.33 6.66 -52.49 -0.35 -0.68 16 42 H 0.10 -0.16 6.31 -51.93 -0.33 -0.48 16 43 H 0.08 0.02 8.14 -51.93 -0.42 -0.40 16 LS Contribution 361.37 15.07 5.45 5.45 Total: 0.00 -8.82 361.37 -10.61 -19.43 By element: Atomic # 1 Polarization: -4.33 SS G_CDS: -5.39 Total: -9.72 kcal Atomic # 6 Polarization: 1.87 SS G_CDS: -4.46 Total: -2.58 kcal Atomic # 7 Polarization: -1.66 SS G_CDS: -0.67 Total: -2.33 kcal Atomic # 8 Polarization: -3.60 SS G_CDS: -0.38 Total: -3.98 kcal Atomic # 9 Polarization: -0.38 SS G_CDS: 0.04 Total: -0.34 kcal Atomic # 14 Polarization: -0.73 SS G_CDS: -5.20 Total: -5.93 kcal Total LS contribution 5.45 Total: 5.45 kcal Total: -8.82 -10.61 -19.43 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9705094_10803934.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 16.108 kcal (2) G-P(sol) polarization free energy of solvation -8.823 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 7.285 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.610 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.433 kcal (6) G-S(sol) free energy of system = (1) + (5) -3.326 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.56 seconds