Wall clock time and date at job start Tue Mar 9 2021 13:38:24 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42905 * 1 3 3 Si 1.86301 * 109.46868 * 2 1 4 4 C 1.50697 * 109.47086 * 119.99942 * 2 1 3 5 5 C 1.38401 * 119.82651 * 64.99784 * 4 2 1 6 6 C 1.37895 * 120.17011 * 179.97438 * 5 4 2 7 7 C 1.39831 * 119.82533 * 0.02562 * 6 5 4 8 8 C 1.47206 * 120.17048 * 179.97438 * 7 6 5 9 9 C 1.34809 * 120.00112 * 180.02562 * 8 7 6 10 10 C 1.46436 * 119.99887 * 179.97438 * 9 8 7 11 11 O 1.21699 * 119.99829 * 359.97438 * 10 9 8 12 12 N 1.34773 * 119.99804 * 179.97438 * 10 9 8 13 13 C 1.46496 * 119.99822 * 179.97438 * 12 10 9 14 14 H 1.09003 * 112.85170 * 25.33453 * 13 12 10 15 15 C 1.53782 * 113.61372 * 156.53403 * 13 12 10 16 16 C 1.53776 * 87.08315 * 89.11555 * 15 13 12 17 17 H 1.08994 * 113.61055 * 270.79826 * 16 15 13 18 18 C 1.50700 * 113.61461 * 139.98419 * 16 15 13 19 19 C 1.38434 * 120.01503 * 119.99640 * 18 16 15 20 20 F 1.35101 * 120.02609 * 0.02562 * 19 18 16 21 21 C 1.38486 * 119.94895 * 179.97438 * 19 18 16 22 22 C 1.38181 * 119.97253 * 0.02562 * 21 19 18 23 23 C 1.38263 * 120.02588 * 0.02562 * 22 21 19 24 24 C 1.38225 * 120.05394 * 359.71833 * 23 22 21 25 25 C 1.53789 * 113.61441 * 254.13763 * 13 12 10 26 26 C 1.39837 * 119.66296 * 359.97329 * 7 6 5 27 27 C 1.37892 * 119.82608 * 0.02928 * 26 7 6 28 28 H 0.96699 * 113.99951 * 60.00544 * 1 2 3 29 29 H 1.08995 * 109.46769 * 240.00321 * 2 1 3 30 30 H 1.48500 * 110.00202 * 59.99906 * 3 2 1 31 31 H 1.48501 * 109.99782 * 181.32025 * 3 2 1 32 32 H 1.08002 * 119.91530 * 359.97438 * 5 4 2 33 33 H 1.08003 * 120.08223 * 179.72512 * 6 5 4 34 34 H 1.08009 * 119.99861 * 359.97438 * 8 7 6 35 35 H 1.07995 * 120.00226 * 359.97438 * 9 8 7 36 36 H 0.96996 * 119.99878 * 0.02562 * 12 10 9 37 37 H 1.09001 * 113.61298 * 203.66606 * 15 13 12 38 38 H 1.09000 * 113.61350 * 334.47927 * 15 13 12 39 39 H 1.08000 * 120.01272 * 179.97438 * 21 19 18 40 40 H 1.08000 * 119.98523 * 179.97438 * 22 21 19 41 41 H 1.08001 * 119.97223 * 180.02562 * 23 22 21 42 42 H 1.08002 * 119.98761 * 180.27973 * 24 23 22 43 43 H 1.08997 * 113.60855 * 25.43395 * 25 13 12 44 44 H 1.09004 * 113.61243 * 156.33642 * 25 13 12 45 45 H 1.07999 * 120.08945 * 180.02562 * 26 7 6 46 46 H 1.07999 * 119.91739 * 180.02562 * 27 26 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9314 -0.7104 1.2304 5 6 1.6824 -2.0618 1.3949 6 6 2.1392 -2.7190 2.5178 7 6 2.8551 -2.0163 3.4919 8 6 3.3458 -2.7102 4.6939 9 6 4.0353 -2.0293 5.6311 10 6 4.5229 -2.7194 6.8270 11 8 4.3053 -3.9076 6.9750 12 7 5.2126 -2.0388 7.7637 13 6 5.6999 -2.7291 8.9603 14 1 5.8459 -3.7978 8.8026 15 6 6.8999 -2.0351 9.6262 16 6 5.8785 -1.2267 10.4435 17 1 5.5659 -0.3016 9.9592 18 6 6.2789 -1.0275 11.8826 19 6 6.4480 0.2519 12.3836 20 9 6.2537 1.3226 11.5829 21 6 6.8155 0.4334 13.7064 22 6 7.0133 -0.6625 14.5245 23 6 6.8452 -1.9398 14.0227 24 6 6.4733 -2.1221 12.7040 25 6 4.9002 -2.3976 10.2314 26 6 3.1027 -0.6510 3.3184 27 6 2.6392 -0.0079 2.1901 28 1 -0.3933 0.4416 -0.7651 29 1 1.7923 -0.5138 -0.8900 30 1 1.5614 2.4679 1.2085 31 1 3.5346 1.7703 -0.0322 32 1 1.1289 -2.6031 0.6419 33 1 1.9402 -3.7727 2.6469 34 1 3.1527 -3.7647 4.8253 35 1 4.2280 -0.9748 5.4999 36 1 5.3856 -1.0917 7.6458 37 1 7.5112 -2.7048 10.2310 38 1 7.4897 -1.4283 8.9391 39 1 6.9481 1.4310 14.0982 40 1 7.3003 -0.5212 15.5561 41 1 6.9997 -2.7957 14.6630 42 1 6.3378 -3.1203 12.3144 43 1 3.8759 -2.0822 10.0329 44 1 4.9658 -3.1664 11.0014 45 1 3.6553 -0.1016 4.0662 46 1 2.8299 1.0464 2.0544 There are 64 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 64 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_9705094_12360594.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:38:24 Heat of formation + Delta-G solvation = -13.681573 kcal Electronic energy + Delta-G solvation = -28711.873861 eV Core-core repulsion = 24448.503474 eV Total energy + Delta-G solvation = -4263.370386 eV No. of doubly occupied orbitals = 64 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 354.142 amu Computer time = 0.65 seconds Orbital eigenvalues (eV) -49.84227 -41.55397 -40.71613 -40.13172 -38.79577 -37.77045 -35.16853 -34.56502 -32.35832 -31.97123 -31.50432 -31.20944 -27.44943 -26.83845 -26.24807 -24.37908 -24.07099 -23.58936 -22.67356 -22.04963 -20.55542 -20.13808 -18.91520 -18.58402 -18.45622 -17.51341 -17.41812 -17.18602 -16.81678 -16.66325 -16.57268 -16.21756 -15.89535 -15.54051 -15.33680 -15.18928 -15.11983 -15.07060 -14.64155 -14.33295 -14.14780 -14.04536 -13.92084 -13.82622 -13.63489 -13.55889 -13.12207 -13.06506 -13.00015 -12.46502 -12.33642 -12.03237 -11.98703 -11.94938 -11.82893 -11.35630 -11.30323 -10.94163 -10.38879 -10.11446 -10.07219 -9.93424 -9.61166 -9.30239 -5.03667 -0.59562 0.13345 0.18582 0.29432 0.86686 1.20601 1.57691 1.89766 2.10237 2.25263 2.53645 2.71983 3.22692 3.29603 3.35116 3.49815 3.53017 3.60180 3.65074 3.74262 3.74926 3.82775 3.84901 3.97232 4.06629 4.09112 4.11847 4.20978 4.24902 4.27669 4.30477 4.45052 4.56330 4.60905 4.72588 4.75627 4.80118 4.85853 4.87125 4.92465 4.99545 5.03133 5.04190 5.07791 5.17560 5.29968 5.34538 5.39558 5.40620 5.53204 5.56840 5.79405 5.87945 6.47884 6.54247 7.22985 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.545 6.545 2 C -0.075 4.075 3 Si 0.683 3.317 4 C -0.063 4.063 5 C -0.092 4.092 6 C -0.090 4.090 7 C -0.074 4.074 8 C -0.012 4.012 9 C -0.216 4.216 10 C 0.552 3.448 11 O -0.540 6.540 12 N -0.710 5.710 13 C 0.121 3.879 14 H 0.107 0.893 15 C -0.134 4.134 16 C -0.076 4.076 17 H 0.101 0.899 18 C -0.105 4.105 19 C 0.099 3.901 20 F -0.139 7.139 21 C -0.152 4.152 22 C -0.094 4.094 23 C -0.126 4.126 24 C -0.090 4.090 25 C -0.142 4.142 26 C -0.094 4.094 27 C -0.125 4.125 28 H 0.383 0.617 29 H 0.076 0.924 30 H -0.250 1.250 31 H -0.254 1.254 32 H 0.133 0.867 33 H 0.134 0.866 34 H 0.140 0.860 35 H 0.130 0.870 36 H 0.402 0.598 37 H 0.100 0.900 38 H 0.078 0.922 39 H 0.135 0.865 40 H 0.133 0.867 41 H 0.131 0.869 42 H 0.134 0.866 43 H 0.076 0.924 44 H 0.097 0.903 45 H 0.131 0.869 46 H 0.122 0.878 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.956 2.250 -2.114 3.232 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.351 6.351 2 C -0.185 4.185 3 Si 0.584 3.416 4 C -0.063 4.063 5 C -0.110 4.110 6 C -0.108 4.108 7 C -0.074 4.074 8 C -0.032 4.032 9 C -0.237 4.237 10 C 0.341 3.659 11 O -0.419 6.419 12 N -0.361 5.361 13 C 0.015 3.985 14 H 0.125 0.875 15 C -0.172 4.172 16 C -0.094 4.094 17 H 0.119 0.881 18 C -0.106 4.106 19 C 0.080 3.920 20 F -0.117 7.117 21 C -0.171 4.171 22 C -0.112 4.112 23 C -0.145 4.145 24 C -0.108 4.108 25 C -0.180 4.180 26 C -0.112 4.112 27 C -0.143 4.143 28 H 0.231 0.769 29 H 0.094 0.906 30 H -0.175 1.175 31 H -0.179 1.179 32 H 0.150 0.850 33 H 0.152 0.848 34 H 0.157 0.843 35 H 0.147 0.853 36 H 0.237 0.763 37 H 0.118 0.882 38 H 0.097 0.903 39 H 0.153 0.847 40 H 0.151 0.849 41 H 0.149 0.851 42 H 0.151 0.849 43 H 0.095 0.905 44 H 0.115 0.885 45 H 0.149 0.851 46 H 0.139 0.861 Dipole moment (debyes) X Y Z Total from point charges 1.382 1.727 -1.053 2.450 hybrid contribution 0.142 0.368 0.122 0.413 sum 1.524 2.094 -0.931 2.753 Atomic orbital electron populations 1.86496 1.17020 1.81849 1.49756 1.24727 0.85889 1.10498 0.97425 0.95249 0.80798 0.78086 0.87420 1.19532 0.97625 0.94321 0.94791 1.20990 0.98467 0.93600 0.97903 1.21474 0.96071 1.00247 0.93004 1.19051 0.99915 0.93471 0.94951 1.22406 0.90663 1.00040 0.90101 1.22875 1.04389 1.00860 0.95536 1.18313 0.77731 0.86755 0.83057 1.90836 1.57148 1.15280 1.78630 1.45557 1.56689 1.13111 1.20708 1.21824 0.94396 0.98246 0.84014 0.87501 1.23417 0.96092 0.99077 0.98583 1.21593 0.97592 0.99078 0.91173 0.88104 1.19743 1.02567 0.91669 0.96575 1.17597 1.02354 0.83065 0.88966 1.91489 1.92713 1.54329 1.73204 1.21208 1.02671 1.00872 0.92327 1.21074 0.98330 0.91881 0.99954 1.21257 0.99974 0.97581 0.95641 1.20946 0.98116 0.98359 0.93371 1.23617 0.99018 0.97596 0.97810 1.21307 0.98898 0.93780 0.97176 1.20837 0.99892 0.99050 0.94500 0.76889 0.90569 1.17494 1.17910 0.84956 0.84766 0.84270 0.85262 0.76291 0.88163 0.90340 0.84683 0.84911 0.85135 0.84850 0.90529 0.88483 0.85081 0.86106 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 0.01 12.81 -35.23 -0.45 -0.44 16 2 C -0.07 0.03 2.79 36.00 0.10 0.13 16 3 Si 0.68 -0.90 29.83 -169.99 -5.07 -5.97 16 4 C -0.06 -0.12 5.39 -104.50 -0.56 -0.68 16 5 C -0.09 -0.14 9.66 -39.65 -0.38 -0.52 16 6 C -0.09 -0.10 9.80 -39.11 -0.38 -0.48 16 7 C -0.07 -0.11 5.87 -105.06 -0.62 -0.72 16 8 C -0.01 -0.02 9.46 -37.16 -0.35 -0.37 16 9 C -0.22 -0.14 9.41 -37.50 -0.35 -0.49 16 10 C 0.55 1.39 7.74 -12.96 -0.10 1.29 16 11 O -0.54 -3.42 15.85 5.19 0.08 -3.34 16 12 N -0.71 0.03 5.26 -54.40 -0.29 -0.26 16 13 C 0.12 -0.01 4.30 -67.12 -0.29 -0.30 16 14 H 0.11 0.14 7.50 -51.93 -0.39 -0.24 16 15 C -0.13 0.19 7.29 -25.92 -0.19 0.00 16 16 C -0.08 0.04 3.79 -90.82 -0.34 -0.30 16 17 H 0.10 -0.03 7.45 -51.93 -0.39 -0.42 16 18 C -0.10 -0.06 5.29 -104.55 -0.55 -0.61 16 19 C 0.10 0.17 7.25 -39.42 -0.29 -0.11 16 20 F -0.14 -0.39 16.36 2.25 0.04 -0.36 16 21 C -0.15 -0.10 10.03 -39.51 -0.40 -0.49 16 22 C -0.09 0.05 10.04 -39.59 -0.40 -0.35 16 23 C -0.13 0.10 10.04 -39.58 -0.40 -0.30 16 24 C -0.09 0.05 8.62 -39.59 -0.34 -0.29 16 25 C -0.14 0.06 7.27 -25.77 -0.19 -0.13 16 26 C -0.09 -0.11 9.41 -39.11 -0.37 -0.48 16 27 C -0.13 -0.25 8.65 -39.65 -0.34 -0.59 16 28 H 0.38 -1.94 8.74 45.56 0.40 -1.54 16 29 H 0.08 -0.15 7.96 -51.93 -0.41 -0.57 16 30 H -0.25 -0.45 7.04 56.52 0.40 -0.05 16 31 H -0.25 -0.28 7.11 56.52 0.40 0.12 16 32 H 0.13 0.02 8.06 -52.49 -0.42 -0.41 16 33 H 0.13 -0.11 8.06 -52.48 -0.42 -0.53 16 34 H 0.14 0.22 7.52 -52.48 -0.39 -0.18 16 35 H 0.13 -0.24 6.07 -52.49 -0.32 -0.56 16 36 H 0.40 -0.97 8.68 -40.82 -0.35 -1.32 16 37 H 0.10 -0.19 7.73 -51.93 -0.40 -0.59 16 38 H 0.08 -0.13 8.14 -51.93 -0.42 -0.55 16 39 H 0.14 -0.09 8.06 -52.49 -0.42 -0.52 16 40 H 0.13 -0.33 8.06 -52.49 -0.42 -0.76 16 41 H 0.13 -0.35 8.06 -52.49 -0.42 -0.78 16 42 H 0.13 -0.30 6.65 -52.49 -0.35 -0.65 16 43 H 0.08 0.05 8.14 -51.93 -0.42 -0.37 16 44 H 0.10 -0.12 6.31 -51.93 -0.33 -0.45 16 45 H 0.13 -0.14 6.17 -52.49 -0.32 -0.46 16 46 H 0.12 0.16 4.84 -52.49 -0.25 -0.10 16 LS Contribution 388.56 15.07 5.86 5.86 Total: 0.00 -8.99 388.56 -12.25 -21.24 By element: Atomic # 1 Polarization: -5.24 SS G_CDS: -5.68 Total: -10.92 kcal Atomic # 6 Polarization: 0.93 SS G_CDS: -6.74 Total: -5.81 kcal Atomic # 7 Polarization: 0.03 SS G_CDS: -0.29 Total: -0.26 kcal Atomic # 8 Polarization: -3.41 SS G_CDS: -0.37 Total: -3.78 kcal Atomic # 9 Polarization: -0.39 SS G_CDS: 0.04 Total: -0.36 kcal Atomic # 14 Polarization: -0.90 SS G_CDS: -5.07 Total: -5.97 kcal Total LS contribution 5.86 Total: 5.86 kcal Total: -8.99 -12.25 -21.24 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9705094_12360594.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 7.561 kcal (2) G-P(sol) polarization free energy of solvation -8.990 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -1.429 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.252 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.242 kcal (6) G-S(sol) free energy of system = (1) + (5) -13.682 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.65 seconds