Wall clock time and date at job start Tue Mar 9 2021 13:38:36 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42911 * 1 3 3 C 1.35651 * 116.99517 * 2 1 4 4 C 1.40140 * 120.14765 * 179.97438 * 3 2 1 5 5 C 1.47541 * 120.19128 * 0.02562 * 4 3 2 6 6 O 1.21591 * 119.99757 * 359.97438 * 5 4 3 7 7 N 1.34773 * 119.99923 * 179.97438 * 5 4 3 8 8 C 1.46502 * 120.00011 * 179.97438 * 7 5 4 9 9 H 1.08998 * 112.84816 * 336.20131 * 8 7 5 10 10 C 1.53953 * 113.53403 * 107.50200 * 8 7 5 11 11 C 1.53784 * 87.01927 * 89.19570 * 10 8 7 12 12 H 1.09001 * 113.60916 * 270.77250 * 11 10 8 13 13 C 1.50694 * 113.62114 * 139.95130 * 11 10 8 14 14 C 1.38433 * 120.01621 * 140.83859 * 13 11 10 15 15 F 1.35106 * 120.02319 * 0.04634 * 14 13 11 16 16 C 1.38481 * 119.95251 * 180.02562 * 14 13 11 17 17 C 1.38178 * 119.97238 * 0.02562 * 16 14 13 18 18 C 1.38270 * 120.02255 * 0.02562 * 17 16 14 19 19 C 1.38220 * 120.05642 * 359.97438 * 18 17 16 20 20 C 1.53778 * 113.61843 * 204.99947 * 8 7 5 21 21 C 1.39700 * 119.61904 * 180.27428 * 4 3 2 22 22 C 1.37789 * 119.90620 * 359.51540 * 21 4 3 23 23 C 1.50702 * 119.84985 * 180.25040 * 22 21 4 24 24 O 1.42905 * 109.46915 * 65.23815 * 23 22 21 25 25 Si 1.86303 * 109.47206 * 185.23532 * 23 22 21 26 26 C 1.38547 * 120.30045 * 0.49031 * 22 21 4 27 27 C 1.38054 * 120.38965 * 359.74037 * 26 22 21 28 28 H 1.08998 * 109.47021 * 60.00242 * 1 2 3 29 29 H 1.09001 * 109.46336 * 180.02562 * 1 2 3 30 30 H 1.08994 * 109.46858 * 299.99787 * 1 2 3 31 31 H 0.96995 * 120.00467 * 359.97438 * 7 5 4 32 32 H 1.08996 * 113.66999 * 334.66605 * 10 8 7 33 33 H 1.09003 * 113.61177 * 203.70811 * 10 8 7 34 34 H 1.07996 * 120.01614 * 179.97438 * 16 14 13 35 35 H 1.08000 * 119.98613 * 179.97438 * 17 16 14 36 36 H 1.08003 * 119.97110 * 179.97438 * 18 17 16 37 37 H 1.07994 * 119.98891 * 180.27873 * 19 18 17 38 38 H 1.08996 * 113.61506 * 156.32920 * 20 8 7 39 39 H 1.09005 * 113.61159 * 25.43292 * 20 8 7 40 40 H 1.08000 * 120.04826 * 179.72448 * 21 4 3 41 41 H 1.09000 * 109.47372 * 305.23888 * 23 22 21 42 42 H 0.96696 * 113.99623 * 60.00258 * 24 23 22 43 43 H 1.48500 * 109.99737 * 58.68240 * 25 23 22 44 44 H 1.48492 * 110.00308 * 179.97438 * 25 23 22 45 45 H 1.07998 * 119.80482 * 179.71403 * 26 22 21 46 46 H 1.07997 * 119.95588 * 180.02562 * 27 26 22 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4291 0.0000 0.0000 3 6 2.0448 1.2087 0.0000 4 6 3.4441 1.2858 0.0005 5 6 4.2551 0.0532 0.0005 6 8 3.7096 -1.0334 0.0005 7 7 5.6005 0.1319 0.0005 8 6 6.4058 -1.0920 0.0011 9 1 5.8707 -1.9505 0.4068 10 6 7.0984 -1.3728 -1.3449 11 6 8.2771 -0.5351 -0.8217 12 1 8.1909 0.5280 -1.0465 13 6 9.6267 -1.1015 -1.1805 14 6 10.6588 -0.2539 -1.5446 15 9 10.4572 1.0816 -1.5775 16 6 11.8983 -0.7759 -1.8745 17 6 12.1034 -2.1419 -1.8405 18 6 11.0713 -2.9876 -1.4777 19 6 9.8337 -2.4677 -1.1482 20 6 7.8112 -0.9045 0.5965 21 6 4.0667 2.5364 0.0063 22 6 3.3037 3.6837 0.0014 23 6 3.9767 5.0321 0.0020 24 8 4.6993 5.2043 -1.2188 25 14 2.6884 6.3691 0.1548 26 6 1.9206 3.6033 0.0009 27 6 1.2924 2.3740 0.0000 28 1 -0.3633 0.5138 -0.8900 29 1 -0.3632 -1.0277 0.0005 30 1 -0.3633 0.5138 0.8900 31 1 6.0357 0.9987 0.0002 32 1 6.5907 -0.9261 -2.1998 33 1 7.3439 -2.4236 -1.4987 34 1 12.7042 -0.1156 -2.1591 35 1 13.0698 -2.5493 -2.0982 36 1 11.2324 -4.0552 -1.4519 37 1 9.0297 -3.1289 -0.8607 38 1 8.2519 -1.8269 0.9745 39 1 7.8781 -0.0802 1.3067 40 1 5.1446 2.6038 0.0113 41 1 4.6661 5.0938 0.8440 42 1 4.1476 5.1610 -2.0118 43 1 1.9088 6.1826 1.4049 44 1 3.3393 7.7038 0.1572 45 1 1.3303 4.5077 0.0017 46 1 0.2138 2.3195 -0.0008 There are 65 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 65 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_9705094_12496546.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:38:36 Heat of formation + Delta-G solvation = -60.441839 kcal Electronic energy + Delta-G solvation = -31300.739293 eV Core-core repulsion = 26844.885178 eV Total energy + Delta-G solvation = -4455.854115 eV No. of doubly occupied orbitals = 65 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 358.141 amu Computer time = 0.71 seconds Orbital eigenvalues (eV) -49.79223 -41.86618 -41.15610 -39.83560 -39.20919 -38.57662 -37.16231 -34.59259 -32.76293 -31.92221 -31.57071 -31.37727 -28.61714 -26.77604 -26.53692 -26.21982 -25.11632 -23.79904 -22.98081 -22.40130 -21.50445 -20.20497 -19.44918 -18.76223 -18.37092 -18.11004 -17.39838 -17.22295 -17.00691 -16.84573 -16.55605 -16.51299 -16.24045 -15.91548 -15.85864 -15.71663 -15.24930 -15.16587 -15.04988 -14.59431 -14.56665 -14.27603 -14.09730 -13.93214 -13.71310 -13.56626 -13.45381 -13.19062 -13.06779 -12.98081 -12.45699 -12.40623 -12.18297 -12.08627 -11.92424 -11.85175 -11.76252 -11.24963 -10.84533 -10.43610 -10.24589 -10.00624 -9.87938 -9.56874 -9.29412 -5.11490 -0.26531 0.17364 0.18109 0.22434 1.21706 1.55985 1.85517 1.91575 2.10872 2.20975 2.57428 2.71465 3.27492 3.36704 3.39995 3.48730 3.57766 3.58868 3.65070 3.67149 3.79472 3.90076 3.94865 4.01086 4.04795 4.11525 4.18768 4.19204 4.28996 4.32721 4.34456 4.46126 4.56081 4.60349 4.64001 4.66203 4.80582 4.85298 4.88176 4.90326 4.98287 5.03890 5.07253 5.11500 5.21663 5.22429 5.38164 5.44161 5.48229 5.63050 5.91901 6.27451 6.50721 6.55595 7.34247 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.019 3.981 2 O -0.279 6.279 3 C 0.193 3.807 4 C -0.175 4.175 5 C 0.565 3.435 6 O -0.514 6.514 7 N -0.714 5.714 8 C 0.124 3.876 9 H 0.108 0.892 10 C -0.142 4.142 11 C -0.076 4.076 12 H 0.101 0.899 13 C -0.104 4.104 14 C 0.100 3.900 15 F -0.138 7.138 16 C -0.152 4.152 17 C -0.095 4.095 18 C -0.127 4.127 19 C -0.090 4.090 20 C -0.135 4.135 21 C -0.019 4.019 22 C -0.169 4.169 23 C -0.062 4.062 24 O -0.540 6.540 25 Si 0.684 3.316 26 C -0.045 4.045 27 C -0.214 4.214 28 H 0.059 0.941 29 H 0.105 0.895 30 H 0.058 0.942 31 H 0.399 0.601 32 H 0.076 0.924 33 H 0.096 0.904 34 H 0.135 0.865 35 H 0.133 0.867 36 H 0.130 0.870 37 H 0.134 0.866 38 H 0.100 0.900 39 H 0.077 0.923 40 H 0.135 0.865 41 H 0.114 0.886 42 H 0.380 0.620 43 H -0.257 1.257 44 H -0.253 1.253 45 H 0.134 0.866 46 H 0.141 0.859 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.704 0.641 -1.171 2.165 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.076 4.076 2 O -0.189 6.189 3 C 0.144 3.856 4 C -0.179 4.179 5 C 0.352 3.648 6 O -0.389 6.389 7 N -0.367 5.367 8 C 0.018 3.982 9 H 0.126 0.874 10 C -0.180 4.180 11 C -0.095 4.095 12 H 0.119 0.881 13 C -0.105 4.105 14 C 0.080 3.920 15 F -0.117 7.117 16 C -0.171 4.171 17 C -0.113 4.113 18 C -0.145 4.145 19 C -0.108 4.108 20 C -0.173 4.173 21 C -0.038 4.038 22 C -0.169 4.169 23 C -0.173 4.173 24 O -0.345 6.345 25 Si 0.586 3.414 26 C -0.063 4.063 27 C -0.233 4.233 28 H 0.078 0.922 29 H 0.123 0.877 30 H 0.077 0.923 31 H 0.235 0.765 32 H 0.095 0.905 33 H 0.115 0.885 34 H 0.153 0.847 35 H 0.150 0.850 36 H 0.148 0.852 37 H 0.151 0.849 38 H 0.118 0.882 39 H 0.096 0.904 40 H 0.152 0.848 41 H 0.132 0.868 42 H 0.227 0.773 43 H -0.182 1.182 44 H -0.178 1.178 45 H 0.151 0.849 46 H 0.159 0.841 Dipole moment (debyes) X Y Z Total from point charges -1.853 0.415 -0.269 1.918 hybrid contribution 0.466 0.518 0.227 0.733 sum -1.387 0.933 -0.042 1.672 Atomic orbital electron populations 1.23240 0.78166 1.04776 1.01458 1.86385 1.21216 1.25164 1.86163 1.19083 0.90910 0.85083 0.90479 1.19313 0.90896 0.93822 1.13826 1.17937 0.81720 0.88701 0.76402 1.90845 1.71429 1.28566 1.48046 1.45580 1.05761 1.09098 1.76229 1.21834 0.90994 0.88572 0.96801 0.87391 1.23597 0.95396 1.00918 0.98096 1.21552 0.90420 1.00398 0.97105 0.88096 1.19749 0.94886 0.93706 1.02140 1.17601 0.94610 0.77277 1.02470 1.91495 1.95551 1.30489 1.94136 1.21203 0.96161 0.96698 1.03036 1.21069 0.99641 0.92349 0.98229 1.21251 0.92981 1.00446 0.99812 1.20935 0.97613 0.93624 0.98609 1.23435 0.94724 1.03299 0.95814 1.20974 0.99871 0.89894 0.93077 1.20124 0.93553 0.96048 1.07210 1.24969 1.03127 0.98973 0.90271 1.86514 1.37898 1.95087 1.15030 0.94855 0.81155 0.77722 0.87680 1.20974 0.93595 0.97261 0.94497 1.21234 1.00766 0.91550 1.09705 0.92231 0.87655 0.92340 0.76523 0.90489 0.88534 0.84699 0.84950 0.85172 0.84867 0.88173 0.90387 0.84774 0.86847 0.77300 1.18185 1.17810 0.84859 0.84083 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.02 9.81 101.05 0.99 0.97 16 2 O -0.28 -0.96 8.57 -40.53 -0.35 -1.31 16 3 C 0.19 0.44 6.70 -38.70 -0.26 0.18 16 4 C -0.17 -0.40 5.89 -104.84 -0.62 -1.02 16 5 C 0.56 2.11 7.76 -12.47 -0.10 2.01 16 6 O -0.51 -3.79 14.76 -16.59 -0.24 -4.04 16 7 N -0.71 -0.56 5.21 -53.97 -0.28 -0.84 16 8 C 0.12 0.05 4.33 -67.03 -0.29 -0.24 16 9 H 0.11 0.19 7.46 -51.93 -0.39 -0.20 16 10 C -0.14 0.02 7.27 -25.83 -0.19 -0.17 16 11 C -0.08 0.02 3.78 -90.96 -0.34 -0.33 16 12 H 0.10 0.02 7.43 -51.93 -0.39 -0.37 16 13 C -0.10 -0.08 5.29 -104.56 -0.55 -0.64 16 14 C 0.10 0.20 7.25 -39.42 -0.29 -0.09 16 15 F -0.14 -0.44 16.35 2.25 0.04 -0.40 16 16 C -0.15 -0.13 10.03 -39.51 -0.40 -0.52 16 17 C -0.09 0.03 10.04 -39.59 -0.40 -0.37 16 18 C -0.13 0.08 10.04 -39.58 -0.40 -0.32 16 19 C -0.09 0.03 8.54 -39.59 -0.34 -0.31 16 20 C -0.13 0.13 7.29 -25.92 -0.19 -0.05 16 21 C -0.02 0.00 9.16 -39.20 -0.36 -0.36 16 22 C -0.17 0.12 5.35 -104.67 -0.56 -0.44 16 23 C -0.06 0.08 2.79 36.01 0.10 0.18 16 24 O -0.54 0.40 12.83 -35.23 -0.45 -0.05 16 25 Si 0.68 -1.27 29.79 -169.99 -5.06 -6.34 16 26 C -0.05 0.06 8.65 -39.53 -0.34 -0.28 16 27 C -0.21 0.09 9.03 -39.48 -0.36 -0.27 16 28 H 0.06 -0.15 7.66 -51.93 -0.40 -0.55 16 29 H 0.11 -0.19 8.14 -51.93 -0.42 -0.62 16 30 H 0.06 -0.14 7.66 -51.93 -0.40 -0.53 16 31 H 0.40 -0.50 6.73 -40.82 -0.27 -0.78 16 32 H 0.08 0.07 8.14 -51.93 -0.42 -0.36 16 33 H 0.10 -0.10 6.40 -51.93 -0.33 -0.43 16 34 H 0.14 -0.07 8.06 -52.49 -0.42 -0.49 16 35 H 0.13 -0.31 8.06 -52.49 -0.42 -0.73 16 36 H 0.13 -0.33 8.06 -52.48 -0.42 -0.75 16 37 H 0.13 -0.28 6.73 -52.49 -0.35 -0.63 16 38 H 0.10 -0.17 7.64 -51.93 -0.40 -0.56 16 39 H 0.08 -0.09 8.14 -51.93 -0.42 -0.51 16 40 H 0.13 -0.21 6.40 -52.49 -0.34 -0.54 16 41 H 0.11 -0.11 7.96 -51.93 -0.41 -0.52 16 42 H 0.38 -1.67 8.70 45.56 0.40 -1.27 16 43 H -0.26 -0.12 7.11 56.52 0.40 0.28 16 44 H -0.25 -0.41 7.11 56.52 0.40 -0.01 16 45 H 0.13 -0.49 4.88 -52.49 -0.26 -0.74 16 46 H 0.14 -0.38 6.30 -52.49 -0.33 -0.71 16 LS Contribution 381.29 15.07 5.75 5.75 Total: 0.00 -9.24 381.29 -11.08 -20.32 By element: Atomic # 1 Polarization: -5.43 SS G_CDS: -5.60 Total: -11.03 kcal Atomic # 6 Polarization: 2.82 SS G_CDS: -4.88 Total: -2.06 kcal Atomic # 7 Polarization: -0.56 SS G_CDS: -0.28 Total: -0.84 kcal Atomic # 8 Polarization: -4.35 SS G_CDS: -1.04 Total: -5.40 kcal Atomic # 9 Polarization: -0.44 SS G_CDS: 0.04 Total: -0.40 kcal Atomic # 14 Polarization: -1.27 SS G_CDS: -5.06 Total: -6.34 kcal Total LS contribution 5.75 Total: 5.75 kcal Total: -9.24 -11.08 -20.32 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9705094_12496546.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -40.119 kcal (2) G-P(sol) polarization free energy of solvation -9.239 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -49.358 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.084 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.323 kcal (6) G-S(sol) free energy of system = (1) + (5) -60.442 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.71 seconds