Wall clock time and date at job start Tue Mar 9 2021 13:39:17 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42896 * 1 3 3 Si 1.86302 * 109.46959 * 2 1 4 4 C 1.50701 * 109.46974 * 119.99192 * 2 1 3 5 5 C 1.38895 * 119.68115 * 245.00682 * 4 2 1 6 6 C 1.36474 * 120.61510 * 179.72153 * 5 4 2 7 7 C 1.40060 * 119.83108 * 359.97438 * 6 5 4 8 8 C 1.41587 * 133.37981 * 179.97438 * 7 6 5 9 9 C 1.35862 * 107.73366 * 180.02562 * 8 7 6 10 10 C 1.47051 * 125.43196 * 180.02562 * 9 8 7 11 11 O 1.21644 * 120.00194 * 359.97259 * 10 9 8 12 12 N 1.34785 * 120.00323 * 179.97438 * 10 9 8 13 13 C 1.46491 * 120.00083 * 179.97438 * 12 10 9 14 14 H 1.09002 * 112.85175 * 25.33872 * 13 12 10 15 15 C 1.53781 * 113.61407 * 156.52750 * 13 12 10 16 16 C 1.53787 * 87.08057 * 89.11641 * 15 13 12 17 17 H 1.08994 * 113.61809 * 270.80335 * 16 15 13 18 18 C 1.50700 * 113.61393 * 139.98112 * 16 15 13 19 19 C 1.38431 * 120.01176 * 119.72458 * 18 16 15 20 20 F 1.35103 * 120.02943 * 0.02562 * 19 18 16 21 21 C 1.38486 * 119.94850 * 179.72681 * 19 18 16 22 22 C 1.38175 * 119.97372 * 0.57493 * 21 19 18 23 23 C 1.38275 * 120.02593 * 359.69848 * 22 21 19 24 24 C 1.38217 * 120.04802 * 0.02562 * 23 22 21 25 25 C 1.53781 * 113.61832 * 254.13810 * 13 12 10 26 26 N 1.38161 * 109.14241 * 0.02562 * 9 8 7 27 27 C 1.37490 * 108.79010 * 359.97438 * 26 9 8 28 28 C 1.37722 * 119.66841 * 64.72884 * 4 2 1 29 29 H 0.96705 * 113.99803 * 60.00691 * 1 2 3 30 30 H 1.08997 * 109.47616 * 239.99820 * 2 1 3 31 31 H 1.48504 * 109.99886 * 298.67651 * 3 2 1 32 32 H 1.48500 * 110.00129 * 59.99352 * 3 2 1 33 33 H 1.08000 * 119.69083 * 359.74222 * 5 4 2 34 34 H 1.08002 * 120.07924 * 179.97438 * 6 5 4 35 35 H 1.07999 * 126.13599 * 0.02562 * 8 7 6 36 36 H 0.97003 * 119.99295 * 0.02562 * 12 10 9 37 37 H 1.08999 * 113.61735 * 203.66798 * 15 13 12 38 38 H 1.09002 * 113.61386 * 334.48894 * 15 13 12 39 39 H 1.07996 * 120.01374 * 180.29567 * 21 19 18 40 40 H 1.07999 * 119.99274 * 179.72658 * 22 21 19 41 41 H 1.07998 * 119.97488 * 180.02562 * 23 22 21 42 42 H 1.08001 * 119.98728 * 180.02562 * 24 23 22 43 43 H 1.08994 * 113.61352 * 25.43187 * 25 13 12 44 44 H 1.09000 * 113.61780 * 156.33872 * 25 13 12 45 45 H 0.96999 * 125.60471 * 180.02562 * 26 9 8 46 46 H 1.07991 * 120.09785 * 0.25707 * 28 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0499 1.7565 0.0000 4 6 1.9313 -0.7102 1.2306 5 6 2.6412 -0.0022 2.1917 6 6 3.1000 -0.6250 3.3160 7 6 2.8539 -1.9907 3.5056 8 6 3.1858 -2.9050 4.5345 9 6 2.6837 -4.1188 4.1873 10 6 2.8048 -5.3503 4.9817 11 8 3.3948 -5.3325 6.0453 12 7 2.2620 -6.4990 4.5314 13 6 2.3831 -7.7259 5.3225 14 1 2.5162 -7.5319 6.3869 15 6 1.2918 -8.7656 5.0178 16 6 2.2280 -9.3129 3.9274 17 1 2.0946 -8.8349 2.9570 18 6 2.2404 -10.8174 3.8419 19 6 1.8576 -11.4475 2.6702 20 9 1.4732 -10.7141 1.6026 21 6 1.8749 -12.8300 2.5911 22 6 2.2628 -13.5792 3.6854 23 6 2.6395 -12.9489 4.8571 24 6 2.6281 -11.5690 4.9353 25 6 3.3949 -8.7318 4.7485 26 7 2.0412 -4.0117 2.9689 27 6 2.1339 -2.7112 2.5322 28 6 1.6768 -2.0539 1.3938 29 1 -0.3933 0.4416 -0.7652 30 1 1.7924 -0.5138 -0.8899 31 1 1.5878 2.4585 -1.2243 32 1 1.5613 2.4680 1.2084 33 1 2.8316 1.0512 2.0482 34 1 3.6515 -0.0661 4.0577 35 1 3.7390 -2.6783 5.4339 36 1 1.7919 -6.5132 3.6830 37 1 1.1158 -9.4660 5.8342 38 1 0.3716 -8.3310 4.6272 39 1 1.5811 -13.3225 1.6760 40 1 2.2721 -14.6575 3.6255 41 1 2.9429 -13.5353 5.7118 42 1 2.9229 -11.0777 5.8508 43 1 4.1718 -8.2701 4.1393 44 1 3.7928 -9.4230 5.4914 45 1 1.5971 -4.7348 2.4992 46 1 1.1236 -2.5956 0.6410 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_9705094_13158378.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:39:17 Heat of formation + Delta-G solvation = 7.435460 kcal Electronic energy + Delta-G solvation = -31052.826643 eV Core-core repulsion = 26596.719908 eV Total energy + Delta-G solvation = -4456.106734 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 367.137 amu Computer time = 0.81 seconds Orbital eigenvalues (eV) -49.89106 -42.67788 -41.51915 -40.18948 -39.06234 -38.61366 -37.06988 -34.79975 -33.28862 -32.07446 -31.53917 -30.99954 -30.40060 -27.31709 -26.92315 -26.17527 -24.51851 -23.79098 -23.16493 -22.70385 -21.90337 -21.22207 -20.37096 -19.58961 -18.77704 -18.55148 -18.00059 -17.50458 -17.24226 -17.14882 -16.76754 -16.62605 -16.37843 -16.33976 -15.81519 -15.46094 -15.23313 -15.19973 -15.07128 -14.96419 -14.72718 -14.55444 -14.22904 -14.18506 -13.99322 -13.85425 -13.66432 -13.49820 -13.17299 -13.13559 -12.69762 -12.51477 -12.31005 -12.08967 -12.06626 -11.91701 -11.63087 -11.39401 -11.26217 -10.89772 -10.49521 -10.29460 -9.98502 -9.65734 -9.28456 -8.78658 -4.94812 -0.30966 0.08957 0.14627 0.56668 1.01746 1.27579 1.60360 1.75818 1.88606 1.97366 2.25489 2.49369 2.76146 3.16036 3.27423 3.34524 3.44923 3.48043 3.57600 3.63574 3.68465 3.77814 3.85595 3.92613 3.99735 4.05204 4.19555 4.20222 4.25991 4.32110 4.40256 4.45420 4.49657 4.53959 4.59408 4.68114 4.71159 4.80873 4.84463 4.92475 4.93222 4.99095 4.99663 5.12665 5.23349 5.34345 5.37029 5.42738 5.44745 5.58577 5.64386 5.83753 5.99605 6.19412 6.34746 6.41254 6.97875 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.536 6.536 2 C -0.077 4.077 3 Si 0.688 3.312 4 C -0.041 4.041 5 C -0.144 4.144 6 C -0.050 4.050 7 C -0.117 4.117 8 C -0.097 4.097 9 C 0.011 3.989 10 C 0.589 3.411 11 O -0.514 6.514 12 N -0.713 5.713 13 C 0.121 3.879 14 H 0.111 0.889 15 C -0.134 4.134 16 C -0.076 4.076 17 H 0.099 0.901 18 C -0.105 4.105 19 C 0.099 3.901 20 F -0.139 7.139 21 C -0.152 4.152 22 C -0.094 4.094 23 C -0.126 4.126 24 C -0.090 4.090 25 C -0.141 4.141 26 N -0.579 5.579 27 C 0.117 3.883 28 C -0.104 4.104 29 H 0.380 0.620 30 H 0.077 0.923 31 H -0.263 1.263 32 H -0.254 1.254 33 H 0.130 0.870 34 H 0.133 0.867 35 H 0.159 0.841 36 H 0.397 0.603 37 H 0.102 0.898 38 H 0.078 0.922 39 H 0.135 0.865 40 H 0.133 0.867 41 H 0.131 0.869 42 H 0.134 0.866 43 H 0.077 0.923 44 H 0.099 0.901 45 H 0.417 0.583 46 H 0.125 0.875 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.836 -2.451 -2.290 3.457 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.344 6.344 2 C -0.186 4.186 3 Si 0.590 3.410 4 C -0.042 4.042 5 C -0.162 4.162 6 C -0.069 4.069 7 C -0.121 4.121 8 C -0.124 4.124 9 C -0.098 4.098 10 C 0.376 3.624 11 O -0.389 6.389 12 N -0.364 5.364 13 C 0.016 3.984 14 H 0.129 0.871 15 C -0.172 4.172 16 C -0.095 4.095 17 H 0.118 0.882 18 C -0.106 4.106 19 C 0.080 3.920 20 F -0.118 7.118 21 C -0.170 4.170 22 C -0.112 4.112 23 C -0.144 4.144 24 C -0.108 4.108 25 C -0.180 4.180 26 N -0.184 5.184 27 C 0.007 3.993 28 C -0.124 4.124 29 H 0.228 0.772 30 H 0.094 0.906 31 H -0.188 1.188 32 H -0.179 1.179 33 H 0.147 0.853 34 H 0.151 0.849 35 H 0.177 0.823 36 H 0.231 0.769 37 H 0.121 0.879 38 H 0.096 0.904 39 H 0.153 0.847 40 H 0.151 0.849 41 H 0.149 0.851 42 H 0.152 0.848 43 H 0.096 0.904 44 H 0.118 0.882 45 H 0.255 0.745 46 H 0.143 0.857 Dipole moment (debyes) X Y Z Total from point charges 1.081 -2.050 -0.995 2.522 hybrid contribution -1.759 -0.632 -1.630 2.480 sum -0.678 -2.683 -2.625 3.814 Atomic orbital electron populations 1.86601 1.17766 1.80208 1.49779 1.24823 0.84497 1.11201 0.98102 0.94871 0.91669 0.74367 0.80122 1.18920 0.97689 0.92657 0.94965 1.20468 1.01473 0.99687 0.94592 1.20352 0.97672 0.91946 0.96914 1.18218 1.03733 0.94400 0.95781 1.20973 1.01816 0.89866 0.99740 1.20040 1.05099 0.95916 0.88715 1.17176 0.78728 0.81599 0.84910 1.90881 1.41578 1.84875 1.21552 1.45563 1.57772 1.08554 1.24464 1.21875 0.96666 0.82832 0.97029 0.87088 1.23433 0.97226 0.97574 0.98925 1.21596 0.97953 0.90533 0.99380 0.88231 1.19715 1.02084 0.95774 0.93052 1.17593 1.00975 0.89342 0.84080 1.91487 1.88702 1.77300 1.54283 1.21209 1.03086 0.91946 1.00807 1.21085 0.97394 1.00401 0.92295 1.21264 1.00170 0.94566 0.98403 1.20942 0.98311 0.93700 0.97811 1.23622 0.96623 0.98012 0.99711 1.41882 1.49070 1.09086 1.18349 1.18272 1.00669 0.83939 0.96453 1.19834 1.02482 0.94036 0.96064 0.77241 0.90553 1.18794 1.17875 0.85275 0.84889 0.82329 0.76912 0.87916 0.90355 0.84669 0.84882 0.85092 0.84814 0.90420 0.88237 0.74539 0.85700 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 -0.55 12.80 -35.23 -0.45 -1.00 16 2 C -0.08 0.02 2.78 36.01 0.10 0.12 16 3 Si 0.69 -0.69 29.82 -169.99 -5.07 -5.76 16 4 C -0.04 -0.05 5.39 -104.57 -0.56 -0.61 16 5 C -0.14 -0.11 8.59 -39.97 -0.34 -0.46 16 6 C -0.05 -0.05 10.06 -39.54 -0.40 -0.45 16 7 C -0.12 -0.26 6.16 -106.93 -0.66 -0.92 16 8 C -0.10 -0.22 10.53 -39.16 -0.41 -0.63 16 9 C 0.01 0.02 6.97 -82.29 -0.57 -0.56 16 10 C 0.59 1.21 7.80 -12.68 -0.10 1.11 16 11 O -0.51 -2.85 16.46 5.24 0.09 -2.76 16 12 N -0.71 0.67 5.26 -54.21 -0.29 0.39 16 13 C 0.12 -0.14 4.29 -67.12 -0.29 -0.42 16 14 H 0.11 0.01 7.50 -51.93 -0.39 -0.38 16 15 C -0.13 0.30 7.29 -25.92 -0.19 0.12 16 16 C -0.08 0.11 3.79 -90.81 -0.34 -0.24 16 17 H 0.10 -0.13 7.45 -51.93 -0.39 -0.51 16 18 C -0.11 0.02 5.29 -104.55 -0.55 -0.54 16 19 C 0.10 0.11 7.25 -39.42 -0.29 -0.17 16 20 F -0.14 -0.30 16.37 2.25 0.04 -0.27 16 21 C -0.15 -0.02 10.03 -39.51 -0.40 -0.42 16 22 C -0.09 0.09 10.04 -39.59 -0.40 -0.30 16 23 C -0.13 0.17 10.04 -39.58 -0.40 -0.23 16 24 C -0.09 0.11 8.61 -39.59 -0.34 -0.23 16 25 C -0.14 0.20 7.27 -25.77 -0.19 0.01 16 26 N -0.58 0.09 6.07 -7.36 -0.04 0.04 16 27 C 0.12 0.20 7.25 -83.97 -0.61 -0.41 16 28 C -0.10 -0.14 9.68 -39.42 -0.38 -0.52 16 29 H 0.38 -1.12 8.74 45.56 0.40 -0.72 16 30 H 0.08 -0.15 7.96 -51.93 -0.41 -0.57 16 31 H -0.26 -0.26 7.11 56.52 0.40 0.14 16 32 H -0.25 -0.54 7.04 56.52 0.40 -0.14 16 33 H 0.13 -0.13 4.81 -52.49 -0.25 -0.38 16 34 H 0.13 -0.16 8.06 -52.49 -0.42 -0.58 16 35 H 0.16 0.23 8.06 -52.49 -0.42 -0.19 16 36 H 0.40 -1.30 7.76 -40.82 -0.32 -1.62 16 37 H 0.10 -0.29 7.72 -51.93 -0.40 -0.69 16 38 H 0.08 -0.19 8.14 -51.93 -0.42 -0.62 16 39 H 0.14 -0.15 8.06 -52.49 -0.42 -0.58 16 40 H 0.13 -0.39 8.06 -52.49 -0.42 -0.81 16 41 H 0.13 -0.42 8.06 -52.49 -0.42 -0.84 16 42 H 0.13 -0.40 6.66 -52.49 -0.35 -0.75 16 43 H 0.08 -0.03 8.14 -51.93 -0.42 -0.46 16 44 H 0.10 -0.22 6.32 -51.93 -0.33 -0.55 16 45 H 0.42 -1.32 8.12 -40.82 -0.33 -1.65 16 46 H 0.13 0.01 8.06 -52.49 -0.42 -0.41 16 LS Contribution 387.71 15.07 5.84 5.84 Total: 0.00 -8.99 387.71 -12.56 -21.55 By element: Atomic # 1 Polarization: -6.93 SS G_CDS: -5.35 Total: -12.29 kcal Atomic # 6 Polarization: 1.57 SS G_CDS: -7.32 Total: -5.75 kcal Atomic # 7 Polarization: 0.76 SS G_CDS: -0.33 Total: 0.43 kcal Atomic # 8 Polarization: -3.40 SS G_CDS: -0.36 Total: -3.76 kcal Atomic # 9 Polarization: -0.30 SS G_CDS: 0.04 Total: -0.27 kcal Atomic # 14 Polarization: -0.69 SS G_CDS: -5.07 Total: -5.76 kcal Total LS contribution 5.84 Total: 5.84 kcal Total: -8.99 -12.56 -21.55 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9705094_13158378.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 28.982 kcal (2) G-P(sol) polarization free energy of solvation -8.990 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 19.992 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.556 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.546 kcal (6) G-S(sol) free energy of system = (1) + (5) 7.435 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.81 seconds