Wall clock time and date at job start Tue Mar 9 2021 13:39:16 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42896 * 1 3 3 Si 1.86302 * 109.46959 * 2 1 4 4 C 1.50701 * 109.46974 * 119.99192 * 2 1 3 5 5 C 1.38895 * 119.68115 * 245.00682 * 4 2 1 6 6 C 1.36474 * 120.61510 * 179.72153 * 5 4 2 7 7 C 1.40060 * 119.83108 * 359.97438 * 6 5 4 8 8 C 1.41587 * 133.37981 * 179.97438 * 7 6 5 9 9 C 1.35862 * 107.73366 * 180.02562 * 8 7 6 10 10 C 1.47051 * 125.43196 * 180.02562 * 9 8 7 11 11 O 1.21644 * 120.00194 * 359.97259 * 10 9 8 12 12 N 1.34785 * 120.00323 * 179.97438 * 10 9 8 13 13 C 1.46491 * 120.00083 * 179.97438 * 12 10 9 14 14 H 1.09002 * 112.85175 * 25.33872 * 13 12 10 15 15 C 1.53781 * 113.61407 * 156.52750 * 13 12 10 16 16 C 1.53787 * 87.08057 * 89.11641 * 15 13 12 17 17 H 1.08994 * 113.61809 * 270.80335 * 16 15 13 18 18 C 1.50700 * 113.61393 * 139.98112 * 16 15 13 19 19 C 1.38431 * 120.01176 * 119.72458 * 18 16 15 20 20 F 1.35103 * 120.02943 * 0.02562 * 19 18 16 21 21 C 1.38486 * 119.94850 * 179.72681 * 19 18 16 22 22 C 1.38175 * 119.97372 * 0.57493 * 21 19 18 23 23 C 1.38275 * 120.02593 * 359.69848 * 22 21 19 24 24 C 1.38217 * 120.04802 * 0.02562 * 23 22 21 25 25 C 1.53781 * 113.61832 * 254.13810 * 13 12 10 26 26 N 1.38161 * 109.14241 * 0.02562 * 9 8 7 27 27 C 1.37490 * 108.79010 * 359.97438 * 26 9 8 28 28 C 1.37722 * 119.66841 * 64.72884 * 4 2 1 29 29 H 0.96705 * 113.99803 * 60.00691 * 1 2 3 30 30 H 1.08997 * 109.47616 * 239.99820 * 2 1 3 31 31 H 1.48504 * 109.99886 * 298.67651 * 3 2 1 32 32 H 1.48500 * 110.00129 * 59.99352 * 3 2 1 33 33 H 1.08000 * 119.69083 * 359.74222 * 5 4 2 34 34 H 1.08002 * 120.07924 * 179.97438 * 6 5 4 35 35 H 1.07999 * 126.13599 * 0.02562 * 8 7 6 36 36 H 0.97003 * 119.99295 * 0.02562 * 12 10 9 37 37 H 1.08999 * 113.61735 * 203.66798 * 15 13 12 38 38 H 1.09002 * 113.61386 * 334.48894 * 15 13 12 39 39 H 1.07996 * 120.01374 * 180.29567 * 21 19 18 40 40 H 1.07999 * 119.99274 * 179.72658 * 22 21 19 41 41 H 1.07998 * 119.97488 * 180.02562 * 23 22 21 42 42 H 1.08001 * 119.98728 * 180.02562 * 24 23 22 43 43 H 1.08994 * 113.61352 * 25.43187 * 25 13 12 44 44 H 1.09000 * 113.61780 * 156.33872 * 25 13 12 45 45 H 0.96999 * 125.60471 * 180.02562 * 26 9 8 46 46 H 1.07991 * 120.09785 * 0.25707 * 28 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0499 1.7565 0.0000 4 6 1.9313 -0.7102 1.2306 5 6 2.6412 -0.0022 2.1917 6 6 3.1000 -0.6250 3.3160 7 6 2.8539 -1.9907 3.5056 8 6 3.1858 -2.9050 4.5345 9 6 2.6837 -4.1188 4.1873 10 6 2.8048 -5.3503 4.9817 11 8 3.3948 -5.3325 6.0453 12 7 2.2620 -6.4990 4.5314 13 6 2.3831 -7.7259 5.3225 14 1 2.5162 -7.5319 6.3869 15 6 1.2918 -8.7656 5.0178 16 6 2.2280 -9.3129 3.9274 17 1 2.0946 -8.8349 2.9570 18 6 2.2404 -10.8174 3.8419 19 6 1.8576 -11.4475 2.6702 20 9 1.4732 -10.7141 1.6026 21 6 1.8749 -12.8300 2.5911 22 6 2.2628 -13.5792 3.6854 23 6 2.6395 -12.9489 4.8571 24 6 2.6281 -11.5690 4.9353 25 6 3.3949 -8.7318 4.7485 26 7 2.0412 -4.0117 2.9689 27 6 2.1339 -2.7112 2.5322 28 6 1.6768 -2.0539 1.3938 29 1 -0.3933 0.4416 -0.7652 30 1 1.7924 -0.5138 -0.8899 31 1 1.5878 2.4585 -1.2243 32 1 1.5613 2.4680 1.2084 33 1 2.8316 1.0512 2.0482 34 1 3.6515 -0.0661 4.0577 35 1 3.7390 -2.6783 5.4339 36 1 1.7919 -6.5132 3.6830 37 1 1.1158 -9.4660 5.8342 38 1 0.3716 -8.3310 4.6272 39 1 1.5811 -13.3225 1.6760 40 1 2.2721 -14.6575 3.6255 41 1 2.9429 -13.5353 5.7118 42 1 2.9229 -11.0777 5.8508 43 1 4.1718 -8.2701 4.1393 44 1 3.7928 -9.4230 5.4914 45 1 1.5971 -4.7348 2.4992 46 1 1.1236 -2.5956 0.6410 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_9705094_13158378.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:39:16 Heat of formation + Delta-G solvation = 10.513035 kcal Electronic energy + Delta-G solvation = -31052.693189 eV Core-core repulsion = 26596.719908 eV Total energy + Delta-G solvation = -4455.973281 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 367.137 amu Computer time = 0.94 seconds Orbital eigenvalues (eV) -49.94710 -42.74862 -41.49155 -40.23161 -39.03806 -38.64807 -37.10006 -34.85694 -33.34853 -32.02848 -31.45329 -31.03229 -30.45390 -27.33640 -26.80172 -26.12589 -24.52741 -23.74627 -23.21290 -22.65744 -21.95727 -21.30542 -20.32512 -19.62420 -18.74230 -18.54315 -18.04688 -17.46791 -17.25602 -17.12416 -16.75094 -16.67299 -16.47829 -16.38737 -15.82933 -15.41852 -15.21902 -15.19466 -15.07018 -14.98086 -14.77043 -14.59641 -14.28986 -14.17089 -13.95110 -13.89648 -13.54328 -13.52523 -13.08619 -13.05609 -12.73616 -12.40515 -12.33941 -12.14720 -11.99208 -11.83435 -11.68655 -11.45420 -11.30811 -10.98376 -10.46830 -10.32727 -9.90115 -9.60085 -9.35769 -8.85056 -4.88017 -0.40151 0.16013 0.22821 0.50285 0.90648 1.32191 1.63255 1.70027 1.89288 1.99172 2.12468 2.58540 2.70890 3.23260 3.35871 3.40168 3.50055 3.54234 3.60996 3.64268 3.78960 3.85604 3.88530 4.02380 4.06201 4.13698 4.19482 4.28540 4.33920 4.36513 4.41429 4.43999 4.55197 4.61283 4.69583 4.75343 4.79820 4.86998 4.92138 4.95547 4.96430 5.01461 5.09209 5.21091 5.26930 5.35670 5.37828 5.46883 5.49840 5.52731 5.56208 5.93462 5.95363 6.19299 6.38086 6.60225 6.88654 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.558 6.558 2 C -0.084 4.084 3 Si 0.766 3.234 4 C -0.051 4.051 5 C -0.150 4.150 6 C -0.057 4.057 7 C -0.135 4.135 8 C -0.114 4.114 9 C 0.009 3.991 10 C 0.590 3.410 11 O -0.555 6.555 12 N -0.698 5.698 13 C 0.117 3.883 14 H 0.100 0.900 15 C -0.122 4.122 16 C -0.074 4.074 17 H 0.096 0.904 18 C -0.111 4.111 19 C 0.071 3.929 20 F -0.152 7.152 21 C -0.164 4.164 22 C -0.099 4.099 23 C -0.128 4.128 24 C -0.094 4.094 25 C -0.136 4.136 26 N -0.565 5.565 27 C 0.107 3.893 28 C -0.111 4.111 29 H 0.395 0.605 30 H 0.098 0.902 31 H -0.287 1.287 32 H -0.299 1.299 33 H 0.143 0.857 34 H 0.150 0.850 35 H 0.158 0.842 36 H 0.409 0.591 37 H 0.112 0.888 38 H 0.083 0.917 39 H 0.140 0.860 40 H 0.152 0.848 41 H 0.152 0.848 42 H 0.152 0.848 43 H 0.066 0.934 44 H 0.110 0.890 45 H 0.430 0.570 46 H 0.136 0.864 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.726 -3.215 -2.564 4.175 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.368 6.368 2 C -0.193 4.193 3 Si 0.672 3.328 4 C -0.053 4.053 5 C -0.169 4.169 6 C -0.076 4.076 7 C -0.140 4.140 8 C -0.141 4.141 9 C -0.101 4.101 10 C 0.378 3.622 11 O -0.432 6.432 12 N -0.349 5.349 13 C 0.012 3.988 14 H 0.118 0.882 15 C -0.160 4.160 16 C -0.092 4.092 17 H 0.114 0.886 18 C -0.112 4.112 19 C 0.052 3.948 20 F -0.131 7.131 21 C -0.183 4.183 22 C -0.117 4.117 23 C -0.146 4.146 24 C -0.112 4.112 25 C -0.175 4.175 26 N -0.171 5.171 27 C -0.003 4.003 28 C -0.132 4.132 29 H 0.246 0.754 30 H 0.116 0.884 31 H -0.214 1.214 32 H -0.226 1.226 33 H 0.161 0.839 34 H 0.168 0.832 35 H 0.176 0.824 36 H 0.246 0.754 37 H 0.131 0.869 38 H 0.102 0.898 39 H 0.158 0.842 40 H 0.170 0.830 41 H 0.170 0.830 42 H 0.170 0.830 43 H 0.085 0.915 44 H 0.128 0.872 45 H 0.271 0.729 46 H 0.154 0.846 Dipole moment (debyes) X Y Z Total from point charges 0.947 -2.862 -1.326 3.294 hybrid contribution -1.756 -0.406 -1.546 2.375 sum -0.808 -3.268 -2.872 4.425 Atomic orbital electron populations 1.86554 1.18461 1.80719 1.51099 1.24999 0.84086 1.11856 0.98337 0.93992 0.90436 0.72172 0.76249 1.19211 0.97613 0.92892 0.95599 1.20686 1.01319 1.00374 0.94482 1.20615 0.97718 0.91765 0.97475 1.18438 1.04368 0.95104 0.96043 1.21107 1.02447 0.90443 1.00099 1.19972 1.05298 0.95613 0.89211 1.17231 0.78362 0.82242 0.84384 1.90856 1.43611 1.85511 1.23261 1.45474 1.56697 1.07936 1.24768 1.21929 0.97714 0.82778 0.96422 0.88198 1.23395 0.96848 0.96926 0.98782 1.21563 0.98186 0.90031 0.99437 0.88600 1.19874 1.02014 0.96337 0.92978 1.17909 1.02533 0.89918 0.84398 1.91446 1.89056 1.77621 1.54931 1.21412 1.03408 0.91826 1.01636 1.21373 0.96904 1.01400 0.92048 1.21598 0.99265 0.94782 0.98906 1.21212 0.97839 0.93989 0.98116 1.23614 0.96251 0.97900 0.99719 1.41787 1.48511 1.09116 1.17717 1.18431 1.00821 0.84457 0.96639 1.20005 1.02673 0.94292 0.96201 0.75450 0.88389 1.21449 1.22630 0.83950 0.83231 0.82390 0.75442 0.86926 0.89829 0.84165 0.83050 0.83032 0.83002 0.91476 0.87188 0.72933 0.84616 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.56 -0.90 12.80 -148.98 -1.91 -2.80 16 2 C -0.08 0.10 2.78 71.24 0.20 0.29 16 3 Si 0.77 -1.71 29.82 68.60 2.05 0.33 16 4 C -0.05 -0.12 5.39 -19.83 -0.11 -0.23 16 5 C -0.15 -0.25 8.59 22.01 0.19 -0.06 16 6 C -0.06 -0.14 10.06 22.30 0.22 0.08 16 7 C -0.14 -0.72 6.16 -21.36 -0.13 -0.85 16 8 C -0.11 -0.67 10.53 22.54 0.24 -0.44 16 9 C 0.01 0.04 6.97 39.91 0.28 0.31 16 10 C 0.59 3.04 7.80 86.55 0.68 3.71 16 11 O -0.55 -7.03 16.46 -4.17 -0.07 -7.09 16 12 N -0.70 1.05 5.26 -443.66 -2.33 -1.28 16 13 C 0.12 -0.24 4.29 45.52 0.20 -0.05 16 14 H 0.10 0.08 7.50 -2.39 -0.02 0.07 16 15 C -0.12 0.62 7.29 31.12 0.23 0.84 16 16 C -0.07 0.21 3.79 -10.92 -0.04 0.17 16 17 H 0.10 -0.21 7.45 -2.39 -0.02 -0.23 16 18 C -0.11 0.04 5.29 -19.82 -0.10 -0.06 16 19 C 0.07 0.21 7.25 22.37 0.16 0.37 16 20 F -0.15 -0.83 16.37 44.97 0.74 -0.10 16 21 C -0.16 -0.09 10.03 22.31 0.22 0.13 16 22 C -0.10 0.26 10.04 22.26 0.22 0.49 16 23 C -0.13 0.50 10.04 22.27 0.22 0.72 16 24 C -0.09 0.31 8.61 22.26 0.19 0.50 16 25 C -0.14 0.39 7.27 31.22 0.23 0.61 16 26 N -0.57 -0.01 6.07 -177.18 -1.08 -1.09 16 27 C 0.11 0.40 7.25 39.13 0.28 0.68 16 28 C -0.11 -0.29 9.68 22.37 0.22 -0.07 16 29 H 0.40 -2.53 8.74 -74.05 -0.65 -3.18 16 30 H 0.10 -0.53 7.96 -2.39 -0.02 -0.55 16 31 H -0.29 -0.52 7.11 99.48 0.71 0.19 16 32 H -0.30 -1.53 7.04 99.48 0.70 -0.83 16 33 H 0.14 -0.28 4.81 -2.91 -0.01 -0.29 16 34 H 0.15 -0.29 8.06 -2.91 -0.02 -0.32 16 35 H 0.16 0.78 8.06 -2.91 -0.02 0.76 16 36 H 0.41 -2.71 7.76 -92.71 -0.72 -3.43 16 37 H 0.11 -0.75 7.72 -2.39 -0.02 -0.77 16 38 H 0.08 -0.48 8.14 -2.39 -0.02 -0.50 16 39 H 0.14 -0.22 8.06 -2.91 -0.02 -0.25 16 40 H 0.15 -1.07 8.06 -2.91 -0.02 -1.09 16 41 H 0.15 -1.27 8.06 -2.91 -0.02 -1.29 16 42 H 0.15 -1.15 6.66 -2.91 -0.02 -1.17 16 43 H 0.07 -0.02 8.14 -2.39 -0.02 -0.04 16 44 H 0.11 -0.55 6.32 -2.39 -0.02 -0.56 16 45 H 0.43 -2.78 8.12 -92.71 -0.75 -3.53 16 46 H 0.14 -0.05 8.06 -2.92 -0.02 -0.07 16 Total: 0.00 -21.93 387.71 -0.03 -21.95 By element: Atomic # 1 Polarization: -16.07 SS G_CDS: -1.01 Total: -17.08 kcal Atomic # 6 Polarization: 3.57 SS G_CDS: 3.59 Total: 7.16 kcal Atomic # 7 Polarization: 1.04 SS G_CDS: -3.41 Total: -2.37 kcal Atomic # 8 Polarization: -7.92 SS G_CDS: -1.98 Total: -9.90 kcal Atomic # 9 Polarization: -0.83 SS G_CDS: 0.74 Total: -0.10 kcal Atomic # 14 Polarization: -1.71 SS G_CDS: 2.05 Total: 0.33 kcal Total: -21.93 -0.03 -21.95 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9705094_13158378.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 32.465 kcal (2) G-P(sol) polarization free energy of solvation -21.927 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 10.538 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.025 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.952 kcal (6) G-S(sol) free energy of system = (1) + (5) 10.513 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.94 seconds