Wall clock time and date at job start Tue Mar 9 2021 13:39:38 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42897 * 1 3 3 Si 1.86305 * 109.47087 * 2 1 4 4 C 1.50699 * 109.47224 * 240.00346 * 2 1 3 5 5 C 1.34197 * 126.54329 * 105.02203 * 4 2 1 6 6 N 1.36865 * 109.96718 * 179.97438 * 5 4 2 7 7 C 1.37396 * 109.98216 * 0.02562 * 6 5 4 8 8 C 1.39331 * 133.25233 * 179.97438 * 7 6 5 9 9 C 1.36352 * 120.23356 * 179.76524 * 8 7 6 10 10 C 1.40165 * 120.67386 * 0.52088 * 9 8 7 11 11 C 1.47652 * 119.97542 * 179.75828 * 10 9 8 12 12 O 1.21582 * 119.99899 * 179.72597 * 11 10 9 13 13 N 1.34774 * 119.99944 * 359.71918 * 11 10 9 14 14 C 1.46504 * 119.99793 * 180.02562 * 13 11 10 15 15 H 1.08998 * 112.85373 * 23.80476 * 14 13 11 16 16 C 1.53783 * 113.61277 * 155.00716 * 14 13 11 17 17 C 1.53772 * 87.08540 * 89.19703 * 16 14 13 18 18 H 1.08997 * 113.61446 * 270.80349 * 17 16 14 19 19 C 1.50699 * 113.61732 * 139.97730 * 17 16 14 20 20 C 1.38434 * 120.01239 * 121.52627 * 19 17 16 21 21 F 1.35099 * 120.02897 * 0.05061 * 20 19 17 22 22 C 1.38485 * 119.94974 * 180.02562 * 20 19 17 23 23 C 1.38176 * 119.97529 * 0.02562 * 22 20 19 24 24 C 1.38274 * 120.02372 * 359.97438 * 23 22 20 25 25 C 1.38217 * 120.01360 * 301.55930 * 19 17 16 26 26 C 1.53782 * 87.17360 * 25.38985 * 17 16 14 27 27 C 1.39194 * 120.04881 * 359.48065 * 10 9 8 28 28 C 1.39232 * 119.39191 * 0.25262 * 27 10 9 29 29 H 0.96704 * 114.00120 * 59.99823 * 1 2 3 30 30 H 1.09000 * 109.47389 * 120.00365 * 2 1 3 31 31 H 1.48505 * 109.99382 * 60.00315 * 3 2 1 32 32 H 1.48501 * 109.99718 * 181.31614 * 3 2 1 33 33 H 1.08002 * 125.01134 * 359.97438 * 5 4 2 34 34 H 0.97000 * 125.00553 * 179.97438 * 6 5 4 35 35 H 1.07997 * 119.88015 * 0.04582 * 8 7 6 36 36 H 1.08005 * 119.66276 * 180.27632 * 9 8 7 37 37 H 0.96999 * 120.00250 * 0.02562 * 13 11 10 38 38 H 1.08998 * 113.61170 * 334.64593 * 16 14 13 39 39 H 1.09001 * 113.68752 * 203.76445 * 16 14 13 40 40 H 1.07996 * 120.01197 * 179.73163 * 22 20 19 41 41 H 1.07991 * 119.98927 * 179.97438 * 23 22 20 42 42 H 1.08000 * 119.97314 * 180.02562 * 24 23 22 43 43 H 1.07998 * 119.98981 * 359.96820 * 25 19 17 44 44 H 1.09006 * 113.61482 * 89.15699 * 26 17 16 45 45 H 1.09003 * 113.61970 * 220.06194 * 26 17 16 46 46 H 1.07996 * 120.29775 * 180.23460 * 27 10 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9313 -0.7103 -1.2305 5 6 2.4612 -0.1386 -2.3229 6 7 2.8035 -1.1004 -3.2344 7 6 2.4954 -2.3453 -2.7415 8 6 2.6338 -3.6348 -3.2507 9 6 2.2336 -4.7104 -2.5143 10 6 1.6690 -4.5366 -1.2433 11 6 1.2360 -5.7119 -0.4614 12 8 0.7508 -5.5620 0.6433 13 7 1.3786 -6.9509 -0.9723 14 6 0.9485 -8.1170 -0.1967 15 1 0.1872 -7.8748 0.5448 16 6 0.5982 -9.3381 -1.0634 17 6 2.0770 -9.7442 -0.9502 18 1 2.7066 -9.3230 -1.7340 19 6 2.2840 -11.2255 -0.7661 20 6 3.0439 -11.9371 -1.6784 21 9 3.6014 -11.3041 -2.7337 22 6 3.2328 -13.2985 -1.5082 23 6 2.6622 -13.9449 -0.4285 24 6 1.9033 -13.2331 0.4821 25 6 1.7145 -11.8742 0.3134 26 6 2.1160 -8.9486 0.3652 27 6 1.5214 -3.2572 -0.7152 28 6 1.9342 -2.1576 -1.4627 29 1 -0.3934 0.4417 -0.7651 30 1 1.7923 -0.5139 0.8899 31 1 1.5614 2.4678 1.2086 32 1 3.5346 1.7703 -0.0321 33 1 2.5972 0.9238 -2.4620 34 1 3.2040 -0.9284 -4.1010 35 1 3.0637 -3.7832 -4.2302 36 1 2.3493 -5.7062 -2.9162 37 1 1.7660 -7.0705 -1.8535 38 1 0.2925 -9.0805 -2.0774 39 1 -0.0847 -10.0367 -0.5800 40 1 3.8219 -13.8554 -2.2217 41 1 2.8090 -15.0066 -0.2958 42 1 1.4581 -13.7391 1.3259 43 1 1.1215 -11.3192 1.0252 44 1 1.8490 -9.5398 1.2412 45 1 3.0339 -8.3770 0.5029 46 1 1.0903 -3.1189 0.2653 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_9705094_13287722.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:39:38 Heat of formation + Delta-G solvation = 5.246412 kcal Electronic energy + Delta-G solvation = -31267.266690 eV Core-core repulsion = 26811.065032 eV Total energy + Delta-G solvation = -4456.201659 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 367.137 amu Computer time = 0.77 seconds Orbital eigenvalues (eV) -49.91980 -42.47757 -41.56752 -40.32995 -38.85755 -37.92359 -37.40866 -34.73915 -33.27441 -32.00282 -31.43394 -30.78153 -30.35626 -26.76898 -26.54005 -26.45188 -24.87156 -23.70139 -23.49280 -22.67093 -21.76676 -20.79424 -20.21908 -19.36099 -18.81881 -18.39999 -17.55407 -17.45887 -17.33452 -17.02705 -16.74113 -16.64248 -16.26422 -16.04454 -15.84756 -15.56674 -15.32270 -15.14930 -15.03968 -14.91152 -14.78384 -14.68218 -14.14369 -14.08513 -13.95976 -13.77761 -13.62738 -13.51002 -13.07012 -13.02574 -12.63320 -12.38782 -12.36806 -12.20368 -11.93981 -11.93174 -11.78733 -11.27598 -11.14255 -10.81967 -10.33159 -10.21081 -9.88411 -9.58279 -9.34717 -8.81936 -5.01307 -0.18717 0.17378 0.18366 0.24156 1.35233 1.52126 1.70569 1.79130 2.00399 2.03790 2.12251 2.59909 2.84922 3.25957 3.39810 3.57284 3.58528 3.61161 3.64968 3.71061 3.82513 3.84917 3.91127 3.91667 4.08271 4.11570 4.16515 4.35217 4.35733 4.38103 4.43818 4.51827 4.57274 4.61179 4.70927 4.75196 4.81475 4.85605 4.94342 4.97157 4.98231 5.07176 5.10982 5.24073 5.24477 5.31489 5.38783 5.46415 5.48429 5.56446 5.57022 5.94850 5.96758 6.43978 6.59638 6.87579 7.12373 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.565 6.565 2 C -0.054 4.054 3 Si 0.812 3.188 4 C -0.227 4.227 5 C 0.088 3.912 6 N -0.571 5.571 7 C 0.111 3.889 8 C -0.125 4.125 9 C -0.069 4.069 10 C -0.179 4.179 11 C 0.563 3.437 12 O -0.586 6.586 13 N -0.696 5.696 14 C 0.114 3.886 15 H 0.090 0.910 16 C -0.121 4.121 17 C -0.071 4.071 18 H 0.099 0.901 19 C -0.111 4.111 20 C 0.073 3.927 21 F -0.150 7.150 22 C -0.163 4.163 23 C -0.099 4.099 24 C -0.128 4.128 25 C -0.095 4.095 26 C -0.138 4.138 27 C -0.023 4.023 28 C -0.129 4.129 29 H 0.394 0.606 30 H 0.083 0.917 31 H -0.307 1.307 32 H -0.280 1.280 33 H 0.222 0.778 34 H 0.440 0.560 35 H 0.161 0.839 36 H 0.157 0.843 37 H 0.413 0.587 38 H 0.086 0.914 39 H 0.110 0.890 40 H 0.142 0.858 41 H 0.153 0.847 42 H 0.151 0.849 43 H 0.149 0.851 44 H 0.106 0.894 45 H 0.064 0.936 46 H 0.106 0.894 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.764 0.835 -8.006 8.241 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.373 6.373 2 C -0.162 4.162 3 Si 0.717 3.283 4 C -0.234 4.234 5 C -0.040 4.040 6 N -0.175 5.175 7 C 0.001 3.999 8 C -0.145 4.145 9 C -0.089 4.089 10 C -0.183 4.183 11 C 0.353 3.647 12 O -0.467 6.467 13 N -0.348 5.348 14 C 0.009 3.991 15 H 0.108 0.892 16 C -0.158 4.158 17 C -0.089 4.089 18 H 0.117 0.883 19 C -0.112 4.112 20 C 0.054 3.946 21 F -0.129 7.129 22 C -0.182 4.182 23 C -0.117 4.117 24 C -0.146 4.146 25 C -0.113 4.113 26 C -0.177 4.177 27 C -0.043 4.043 28 C -0.133 4.133 29 H 0.243 0.757 30 H 0.101 0.899 31 H -0.236 1.236 32 H -0.206 1.206 33 H 0.238 0.762 34 H 0.281 0.719 35 H 0.179 0.821 36 H 0.174 0.826 37 H 0.252 0.748 38 H 0.104 0.896 39 H 0.128 0.872 40 H 0.160 0.840 41 H 0.170 0.830 42 H 0.169 0.831 43 H 0.167 0.833 44 H 0.124 0.876 45 H 0.083 0.917 46 H 0.124 0.876 Dipole moment (debyes) X Y Z Total from point charges 2.066 1.271 -6.458 6.898 hybrid contribution 0.540 -0.728 -0.260 0.943 sum 2.606 0.543 -6.717 7.226 Atomic orbital electron populations 1.86487 1.18108 1.82423 1.50252 1.24763 0.84629 1.11295 0.95539 0.94047 0.76936 0.72372 0.84969 1.20861 1.11819 0.91439 0.99271 1.22256 0.97895 0.95900 0.87908 1.41783 1.53705 1.03101 1.18872 1.18610 0.99722 0.87940 0.93629 1.20056 1.04305 0.88054 1.02061 1.20856 0.96153 1.00157 0.91762 1.19553 1.09089 0.92175 0.97528 1.18483 0.77110 0.83913 0.85177 1.90761 1.46812 1.86752 1.22374 1.45451 1.63533 1.04410 1.21374 1.21910 0.97483 0.84645 0.95064 0.89171 1.23381 0.95424 0.95642 1.01391 1.21488 0.98385 0.89895 0.99147 0.88300 1.19876 0.99281 0.96209 0.95820 1.17885 0.98452 0.91612 0.86618 1.91447 1.83727 1.82563 1.55172 1.21415 1.03117 0.92620 1.01020 1.21368 0.95835 1.01471 0.93018 1.21585 0.98664 0.94202 1.00157 1.21189 0.98668 0.94941 0.96492 1.23591 0.98926 0.97701 0.97447 1.20596 0.94552 0.90798 0.98333 1.19225 1.05025 0.93679 0.95418 0.75674 0.89926 1.23581 1.20634 0.76219 0.71893 0.82098 0.82586 0.74832 0.89558 0.87184 0.84000 0.82978 0.83122 0.83337 0.87615 0.91703 0.87596 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.56 -2.72 12.88 -148.98 -1.92 -4.64 16 2 C -0.05 -0.16 3.06 71.24 0.22 0.06 16 3 Si 0.81 -2.43 30.76 68.60 2.11 -0.32 16 4 C -0.23 -0.47 5.58 -18.61 -0.10 -0.58 16 5 C 0.09 -0.51 10.43 82.99 0.87 0.36 16 6 N -0.57 3.47 6.05 -187.48 -1.13 2.34 16 7 C 0.11 0.08 7.27 39.19 0.28 0.37 16 8 C -0.12 0.26 10.00 22.09 0.22 0.48 16 9 C -0.07 0.00 9.46 22.30 0.21 0.21 16 10 C -0.18 -1.38 5.87 -20.09 -0.12 -1.49 16 11 C 0.56 5.83 7.76 86.73 0.67 6.50 16 12 O -0.59 -11.36 15.93 -3.97 -0.06 -11.42 16 13 N -0.70 -1.78 5.21 -442.79 -2.31 -4.09 16 14 C 0.11 0.21 4.33 45.58 0.20 0.41 16 15 H 0.09 0.53 7.46 -2.39 -0.02 0.52 16 16 C -0.12 0.30 7.29 31.12 0.23 0.52 16 17 C -0.07 0.05 3.78 -11.02 -0.04 0.01 16 18 H 0.10 -0.04 7.43 -2.39 -0.02 -0.06 16 19 C -0.11 -0.14 5.29 -19.82 -0.10 -0.24 16 20 C 0.07 0.29 7.25 22.38 0.16 0.45 16 21 F -0.15 -0.94 16.35 44.97 0.74 -0.20 16 22 C -0.16 -0.21 10.03 22.31 0.22 0.01 16 23 C -0.10 0.17 10.04 22.26 0.22 0.40 16 24 C -0.13 0.32 10.05 22.28 0.22 0.55 16 25 C -0.10 0.14 8.54 22.26 0.19 0.33 16 26 C -0.14 -0.07 7.27 31.18 0.23 0.16 16 27 C -0.02 -0.26 9.64 22.74 0.22 -0.04 16 28 C -0.13 -0.89 6.34 -20.21 -0.13 -1.01 16 29 H 0.39 -1.91 8.70 -74.05 -0.64 -2.55 16 30 H 0.08 0.63 7.96 -2.39 -0.02 0.61 16 31 H -0.31 -1.80 7.11 99.48 0.71 -1.09 16 32 H -0.28 -0.25 7.11 99.48 0.71 0.46 16 33 H 0.22 -3.33 6.35 -2.91 -0.02 -3.35 16 34 H 0.44 -5.85 8.96 -92.71 -0.83 -6.68 16 35 H 0.16 -1.43 8.06 -2.91 -0.02 -1.46 16 36 H 0.16 -1.07 6.36 -2.91 -0.02 -1.09 16 37 H 0.41 -1.41 6.71 -92.71 -0.62 -2.03 16 38 H 0.09 -0.31 8.14 -2.39 -0.02 -0.33 16 39 H 0.11 -0.45 7.64 -2.39 -0.02 -0.47 16 40 H 0.14 -0.17 8.06 -2.91 -0.02 -0.19 16 41 H 0.15 -0.96 8.06 -2.92 -0.02 -0.98 16 42 H 0.15 -1.05 8.06 -2.91 -0.02 -1.08 16 43 H 0.15 -0.77 6.73 -2.91 -0.02 -0.79 16 44 H 0.11 -0.16 6.40 -2.38 -0.02 -0.17 16 45 H 0.06 0.20 8.14 -2.39 -0.02 0.18 16 46 H 0.11 1.72 7.64 -2.91 -0.02 1.70 16 Total: 0.00 -30.06 387.54 0.31 -29.76 By element: Atomic # 1 Polarization: -17.88 SS G_CDS: -0.98 Total: -18.86 kcal Atomic # 6 Polarization: 3.57 SS G_CDS: 3.87 Total: 7.44 kcal Atomic # 7 Polarization: 1.69 SS G_CDS: -3.44 Total: -1.75 kcal Atomic # 8 Polarization: -14.08 SS G_CDS: -1.98 Total: -16.06 kcal Atomic # 9 Polarization: -0.94 SS G_CDS: 0.74 Total: -0.20 kcal Atomic # 14 Polarization: -2.43 SS G_CDS: 2.11 Total: -0.32 kcal Total: -30.06 0.31 -29.76 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9705094_13287722.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 35.003 kcal (2) G-P(sol) polarization free energy of solvation -30.064 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 4.939 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.308 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -29.757 kcal (6) G-S(sol) free energy of system = (1) + (5) 5.246 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.78 seconds