Wall clock time and date at job start Tue Mar 9 2021 13:40:03 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42901 * 1 3 3 Si 1.86295 * 109.47185 * 2 1 4 4 C 1.50707 * 109.46767 * 240.00435 * 2 1 3 5 5 C 1.38357 * 120.34656 * 299.99829 * 4 2 1 6 6 C 1.40021 * 118.28790 * 179.97438 * 5 4 2 7 7 C 1.47836 * 120.56179 * 180.02562 * 6 5 4 8 8 O 1.21553 * 119.99753 * 359.97438 * 7 6 5 9 9 N 1.34780 * 120.00360 * 179.97438 * 7 6 5 10 10 C 1.46495 * 120.00054 * 180.02562 * 9 7 6 11 11 H 1.09000 * 112.85131 * 23.80210 * 10 9 7 12 12 C 1.53784 * 113.61535 * 155.00230 * 10 9 7 13 13 C 1.53774 * 87.08159 * 89.11286 * 12 10 9 14 14 H 1.09010 * 113.61388 * 270.88413 * 13 12 10 15 15 C 1.50696 * 113.61446 * 139.98488 * 13 12 10 16 16 C 1.38444 * 120.01651 * 119.99780 * 15 13 12 17 17 F 1.35102 * 120.02275 * 0.02562 * 16 15 13 18 18 C 1.38478 * 119.95050 * 180.02562 * 16 15 13 19 19 C 1.38182 * 119.97337 * 359.97438 * 18 16 15 20 20 C 1.38262 * 120.02388 * 0.02562 * 19 18 16 21 21 C 1.38220 * 120.01266 * 299.72642 * 15 13 12 22 22 C 1.53775 * 87.08260 * 25.43054 * 13 12 10 23 23 C 1.39523 * 118.88112 * 0.02562 * 6 5 4 24 24 N 1.31694 * 120.56847 * 0.02562 * 23 6 5 25 25 C 1.31933 * 121.87963 * 359.97438 * 24 23 6 26 26 H 0.96703 * 114.00201 * 59.99759 * 1 2 3 27 27 H 1.08995 * 109.47315 * 120.00728 * 2 1 3 28 28 H 1.48500 * 110.00369 * 298.68440 * 3 2 1 29 29 H 1.48504 * 109.99870 * 60.00282 * 3 2 1 30 30 H 1.07994 * 120.85854 * 359.97438 * 5 4 2 31 31 H 0.97000 * 119.99327 * 359.97438 * 9 7 6 32 32 H 1.09002 * 113.61285 * 203.66432 * 12 10 9 33 33 H 1.09006 * 113.61201 * 334.56129 * 12 10 9 34 34 H 1.08002 * 120.01670 * 179.97438 * 18 16 15 35 35 H 1.07993 * 119.98460 * 179.97438 * 19 18 16 36 36 H 1.08008 * 119.97208 * 179.97438 * 20 19 18 37 37 H 1.08000 * 119.98690 * 359.97438 * 21 15 13 38 38 H 1.09001 * 113.61720 * 220.01297 * 22 13 12 39 39 H 1.09008 * 113.60847 * 89.11744 * 22 13 12 40 40 H 1.07998 * 119.72093 * 180.02562 * 23 6 5 41 41 H 1.08000 * 119.46299 * 179.97438 * 25 24 23 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9313 -0.7104 -1.2306 5 6 1.6014 -2.0349 -1.4567 6 6 2.0910 -2.6524 -2.6141 7 6 1.7692 -4.0655 -2.9058 8 8 1.0744 -4.7016 -2.1375 9 7 2.2460 -4.6485 -4.0234 10 6 1.9266 -6.0487 -4.3126 11 1 1.0121 -6.3840 -3.8234 12 6 1.9886 -6.3983 -5.8089 13 6 3.4748 -6.7270 -5.5901 14 1 4.1357 -5.8705 -5.7242 15 6 3.9393 -7.9493 -6.3391 16 6 4.9554 -7.8443 -7.2736 17 9 5.5313 -6.6462 -7.5143 18 6 5.3808 -8.9684 -7.9615 19 6 4.7913 -10.1934 -7.7141 20 6 3.7767 -10.2970 -6.7806 21 6 3.3550 -9.1768 -6.0894 22 6 3.1162 -7.0041 -4.1207 23 6 2.8878 -1.9115 -3.4876 24 7 3.1750 -0.6528 -3.2278 25 6 2.7279 -0.0451 -2.1455 26 1 -0.3934 0.4417 -0.7650 27 1 1.7924 -0.5139 0.8899 28 1 1.5879 2.4586 -1.2242 29 1 1.5615 2.4678 1.2086 30 1 0.9822 -2.5785 -0.7586 31 1 2.8001 -4.1407 -4.6367 32 1 1.3851 -7.2646 -6.0802 33 1 1.8223 -5.5433 -6.4643 34 1 6.1731 -8.8876 -8.6911 35 1 5.1227 -11.0700 -8.2508 36 1 3.3163 -11.2549 -6.5882 37 1 2.5657 -9.2598 -5.3569 38 1 3.8603 -6.6384 -3.4131 39 1 2.8211 -8.0361 -3.9305 40 1 3.2723 -2.3742 -4.3845 41 1 2.9880 0.9884 -1.9708 There are 59 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 59 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_9705094_13287814.mol2 41 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:40:03 Heat of formation + Delta-G solvation = -15.528602 kcal Electronic energy + Delta-G solvation = -26572.694034 eV Core-core repulsion = 22527.581403 eV Total energy + Delta-G solvation = -4045.112631 eV No. of doubly occupied orbitals = 59 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 329.121 amu Computer time = 0.58 seconds Orbital eigenvalues (eV) -49.85464 -42.06365 -41.29618 -40.05003 -38.78463 -38.10669 -34.90952 -33.79470 -33.13109 -31.75453 -31.47803 -27.37980 -26.89204 -26.86782 -25.48450 -23.95163 -23.76580 -22.77028 -21.85053 -20.34518 -19.38709 -18.75436 -18.21441 -17.96163 -17.75924 -17.45882 -17.06951 -16.69731 -16.60079 -16.53187 -16.07095 -15.97604 -15.46523 -15.34525 -15.14903 -14.73428 -14.60709 -14.41526 -14.24399 -14.15181 -13.95380 -13.63823 -13.49989 -13.15381 -13.10768 -12.84320 -12.48632 -12.11870 -12.03070 -11.88217 -11.39609 -11.35456 -11.10259 -10.76223 -10.57967 -10.41837 -10.19948 -9.95783 -9.62997 -5.09603 -0.61401 -0.05451 0.11512 0.17003 1.09816 1.46216 1.67043 1.81534 1.89094 2.51633 2.59188 2.97797 3.18779 3.20093 3.31051 3.33436 3.48077 3.52663 3.56747 3.64492 3.70890 3.71568 3.80783 3.95247 4.02762 4.06471 4.16040 4.22688 4.28583 4.43126 4.50226 4.56516 4.67130 4.74479 4.80718 4.83358 4.86042 4.88642 4.97200 5.01725 5.15454 5.24951 5.29950 5.38538 5.45897 5.86271 6.23868 6.26963 6.59378 7.01556 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.525 6.525 2 C -0.071 4.071 3 Si 0.685 3.315 4 C -0.178 4.178 5 C 0.012 3.988 6 C -0.189 4.189 7 C 0.569 3.431 8 O -0.525 6.525 9 N -0.708 5.708 10 C 0.120 3.880 11 H 0.110 0.890 12 C -0.134 4.134 13 C -0.076 4.076 14 H 0.101 0.899 15 C -0.105 4.105 16 C 0.100 3.900 17 F -0.138 7.138 18 C -0.152 4.152 19 C -0.094 4.094 20 C -0.126 4.126 21 C -0.090 4.090 22 C -0.142 4.142 23 C 0.140 3.860 24 N -0.477 5.477 25 C 0.129 3.871 26 H 0.377 0.623 27 H 0.125 0.875 28 H -0.255 1.255 29 H -0.250 1.250 30 H 0.153 0.847 31 H 0.401 0.599 32 H 0.101 0.899 33 H 0.079 0.921 34 H 0.135 0.865 35 H 0.133 0.867 36 H 0.131 0.869 37 H 0.134 0.866 38 H 0.077 0.923 39 H 0.098 0.902 40 H 0.161 0.839 41 H 0.164 0.836 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.201 -1.091 -2.040 3.193 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.331 6.331 2 C -0.181 4.181 3 Si 0.585 3.415 4 C -0.180 4.180 5 C -0.014 4.014 6 C -0.194 4.194 7 C 0.355 3.645 8 O -0.402 6.402 9 N -0.360 5.360 10 C 0.015 3.985 11 H 0.128 0.872 12 C -0.172 4.172 13 C -0.095 4.095 14 H 0.120 0.880 15 C -0.106 4.106 16 C 0.081 3.919 17 F -0.117 7.117 18 C -0.171 4.171 19 C -0.112 4.112 20 C -0.145 4.145 21 C -0.108 4.108 22 C -0.180 4.180 23 C -0.019 4.019 24 N -0.185 5.185 25 C -0.027 4.027 26 H 0.225 0.775 27 H 0.143 0.857 28 H -0.180 1.180 29 H -0.175 1.175 30 H 0.170 0.830 31 H 0.237 0.763 32 H 0.120 0.880 33 H 0.098 0.902 34 H 0.153 0.847 35 H 0.151 0.849 36 H 0.149 0.851 37 H 0.151 0.849 38 H 0.096 0.904 39 H 0.117 0.883 40 H 0.178 0.822 41 H 0.180 0.820 Dipole moment (debyes) X Y Z Total from point charges 2.111 -0.508 -1.529 2.656 hybrid contribution -1.023 -0.291 -0.475 1.164 sum 1.089 -0.799 -2.003 2.416 Atomic orbital electron populations 1.86646 1.17233 1.79912 1.49359 1.24998 0.84274 1.11207 0.97660 0.95079 0.91417 0.73930 0.81067 1.21378 1.01541 0.95695 0.99403 1.21632 0.92622 0.92919 0.94230 1.21007 1.04135 0.95490 0.98762 1.17995 0.79469 0.85875 0.81147 1.90824 1.37423 1.64590 1.47317 1.45566 1.53553 1.12608 1.24245 1.21874 0.99384 0.80625 0.96611 0.87207 1.23439 0.95364 1.02832 0.95554 1.21554 0.96883 0.95654 0.95379 0.88032 1.19721 0.96831 0.96217 0.97838 1.17593 0.94991 0.81075 0.98258 1.91492 1.83303 1.43528 1.93356 1.21212 1.02295 0.92042 1.01519 1.21078 0.95656 0.97005 0.97463 1.21257 0.97553 0.99019 0.96632 1.20938 0.99478 0.91135 0.99247 1.23576 0.98372 1.00631 0.95443 1.23044 0.91757 0.89725 0.97333 1.67743 1.21533 1.10118 1.19057 1.22912 0.91451 0.99771 0.88564 0.77480 0.85718 1.17956 1.17486 0.82952 0.76284 0.88020 0.90237 0.84663 0.84916 0.85143 0.84859 0.90423 0.88340 0.82197 0.81968 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 -0.24 12.78 -35.23 -0.45 -0.69 16 2 C -0.07 0.09 2.83 36.01 0.10 0.19 16 3 Si 0.69 -1.48 29.82 -169.99 -5.07 -6.55 16 4 C -0.18 0.09 5.39 -104.53 -0.56 -0.47 16 5 C 0.01 0.01 9.31 -38.87 -0.36 -0.35 16 6 C -0.19 -0.10 5.89 -104.82 -0.62 -0.72 16 7 C 0.57 0.90 7.78 -12.33 -0.10 0.80 16 8 O -0.53 -2.78 16.02 5.32 0.09 -2.70 16 9 N -0.71 0.84 5.22 -53.96 -0.28 0.56 16 10 C 0.12 -0.15 4.32 -67.12 -0.29 -0.44 16 11 H 0.11 0.02 7.46 -51.93 -0.39 -0.37 16 12 C -0.13 0.31 7.29 -25.92 -0.19 0.13 16 13 C -0.08 0.11 3.78 -90.97 -0.34 -0.23 16 14 H 0.10 -0.14 7.45 -51.92 -0.39 -0.53 16 15 C -0.11 0.02 5.29 -104.55 -0.55 -0.53 16 16 C 0.10 0.11 7.25 -39.42 -0.29 -0.17 16 17 F -0.14 -0.30 16.37 2.25 0.04 -0.26 16 18 C -0.15 -0.02 10.03 -39.51 -0.40 -0.41 16 19 C -0.09 0.09 10.04 -39.59 -0.40 -0.31 16 20 C -0.13 0.17 10.04 -39.58 -0.40 -0.23 16 21 C -0.09 0.11 8.62 -39.59 -0.34 -0.23 16 22 C -0.14 0.22 7.25 -25.92 -0.19 0.03 16 23 C 0.14 -0.09 10.71 -17.13 -0.18 -0.27 16 24 N -0.48 -0.32 10.35 -12.91 -0.13 -0.45 16 25 C 0.13 -0.07 9.84 -17.47 -0.17 -0.25 16 26 H 0.38 -0.91 8.70 45.56 0.40 -0.51 16 27 H 0.13 -0.25 7.96 -51.93 -0.41 -0.66 16 28 H -0.25 0.09 7.11 56.52 0.40 0.49 16 29 H -0.25 -0.31 7.11 56.52 0.40 0.09 16 30 H 0.15 0.23 7.74 -52.49 -0.41 -0.17 16 31 H 0.40 -1.42 6.77 -40.82 -0.28 -1.70 16 32 H 0.10 -0.28 7.73 -51.93 -0.40 -0.69 16 33 H 0.08 -0.21 8.14 -51.93 -0.42 -0.63 16 34 H 0.14 -0.15 8.06 -52.49 -0.42 -0.58 16 35 H 0.13 -0.39 8.06 -52.49 -0.42 -0.81 16 36 H 0.13 -0.41 8.06 -52.48 -0.42 -0.83 16 37 H 0.13 -0.40 6.64 -52.49 -0.35 -0.74 16 38 H 0.08 -0.05 8.14 -51.93 -0.42 -0.47 16 39 H 0.10 -0.22 6.30 -51.92 -0.33 -0.55 16 40 H 0.16 -0.58 6.42 -52.49 -0.34 -0.92 16 41 H 0.16 -0.45 4.88 -52.49 -0.26 -0.70 16 LS Contribution 348.96 15.07 5.26 5.26 Total: 0.00 -8.29 348.96 -10.28 -18.57 By element: Atomic # 1 Polarization: -5.82 SS G_CDS: -4.46 Total: -10.27 kcal Atomic # 6 Polarization: 1.81 SS G_CDS: -5.27 Total: -3.47 kcal Atomic # 7 Polarization: 0.52 SS G_CDS: -0.42 Total: 0.11 kcal Atomic # 8 Polarization: -3.02 SS G_CDS: -0.36 Total: -3.38 kcal Atomic # 9 Polarization: -0.30 SS G_CDS: 0.04 Total: -0.26 kcal Atomic # 14 Polarization: -1.48 SS G_CDS: -5.07 Total: -6.55 kcal Total LS contribution 5.26 Total: 5.26 kcal Total: -8.29 -10.28 -18.57 kcal The number of atoms in the molecule is 41 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_9705094_13287814.mol2 41 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 3.044 kcal (2) G-P(sol) polarization free energy of solvation -8.289 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -5.245 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.283 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.573 kcal (6) G-S(sol) free energy of system = (1) + (5) -15.529 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.58 seconds